RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.37
AP3D1-211ENST00000591650 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
AP3D1-211ENST00000591650 YTHDF2Q9Y5A9 579 aaKnown RBP12.77□□□□□ -0.37
AP3D1-211ENST00000591650 A0A0J9YX75 114 aa12.76□□□□□ -0.37
AP3D1-211ENST00000591650 RBMY1BA6NDE4 496 aaKnown RBP12.76□□□□□ -0.37
AP3D1-211ENST00000591650 RBMY1EA6NEQ0 496 aaKnown RBP12.76□□□□□ -0.37
AP3D1-211ENST00000591650 GGTLC3B5MD39 225 aa12.76□□□□□ -0.37
AP3D1-211ENST00000591650 RBMY1DP0C7P1 496 aaKnown RBP12.76□□□□□ -0.37
AP3D1-211ENST00000591650 ZNF705DP0CH99 300 aaPredicted RBP12.76□□□□□ -0.37
AP3D1-211ENST00000591650 ZNF705BP0CI00 300 aaPredicted RBP12.76□□□□□ -0.37
AP3D1-211ENST00000591650 HLA-DRB4P13762 266 aa12.76□□□□□ -0.37
AP3D1-211ENST00000591650 CCL20P78556 96 aa12.76□□□□□ -0.37
AP3D1-211ENST00000591650 MRPL53Q96EL3 112 aaKnown RBP12.76□□□□□ -0.37
AP3D1-211ENST00000591650 TUBA4BQ9H853 241 aa12.76□□□□□ -0.37
AP3D1-211ENST00000591650 HLA-DRB4X5D2U9 266 aa12.76□□□□□ -0.37
AP3D1-211ENST00000591650 TRAV1-1A0A0B4J248 108 aa12.75□□□□□ -0.37
AP3D1-211ENST00000591650 FRMD6-AS1P0C7T7 363 aa12.75□□□□□ -0.37
AP3D1-211ENST00000591650 LYPD1Q8N2G4 141 aa12.75□□□□□ -0.37
AP3D1-211ENST00000591650 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
AP3D1-211ENST00000591650 FAM74A7A6NL05 159 aa12.74□□□□□ -0.37
AP3D1-211ENST00000591650 A8MZ25 164 aa12.74□□□□□ -0.37
AP3D1-211ENST00000591650 H3BMM0 161 aa12.74□□□□□ -0.37
AP3D1-211ENST00000591650 RPL35AP18077 110 aaKnown RBP12.74□□□□□ -0.37
AP3D1-211ENST00000591650 TRPT1Q86TN4 253 aaKnown RBP12.74□□□□□ -0.37
AP3D1-211ENST00000591650 STHQ8IWL8 128 aa12.74□□□□□ -0.37
AP3D1-211ENST00000591650 OR8A1Q8NGG7 326 aa12.74□□□□□ -0.37
AP3D1-211ENST00000591650 PCNPQ8WW12 178 aaKnown RBP12.74□□□□□ -0.37
AP3D1-211ENST00000591650 PRELID1Q9Y255 219 aa12.74□□□□□ -0.37
AP3D1-211ENST00000591650 IGKV2-40A0A087WW87 121 aaPredicted RBP12.73□□□□□ -0.37
AP3D1-211ENST00000591650 A0A1W2PRE2 83 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 PGPA6NDG6 321 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 IFNA7P01567 189 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 IGKV2D-40P01614 121 aaPredicted RBP12.73□□□□□ -0.37
AP3D1-211ENST00000591650 HBE1P02100 147 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 GNG5P63218 68 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 HIST1H1AQ02539 215 aaPredicted RBP12.73□□□□□ -0.37
AP3D1-211ENST00000591650 DEFB121Q5J5C9 76 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 EBLN2Q6P2I7 272 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 DNAH9Q9NYC9 4486 aa12.73□□□□□ -0.37
AP3D1-211ENST00000591650 IGKV3-20P01619 116 aa12.72□□□□□ -0.37
AP3D1-211ENST00000591650 CNN1P51911 297 aaKnown RBP12.72□□□□□ -0.37
AP3D1-211ENST00000591650 BLOC1S1P78537 153 aa12.72□□□□□ -0.37
AP3D1-211ENST00000591650 LINC00322Q6ZN03 302 aaPredicted RBP12.72□□□□□ -0.37
AP3D1-211ENST00000591650 PAGE4O60829 102 aa12.71□□□□□ -0.37
AP3D1-211ENST00000591650 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.37
AP3D1-211ENST00000591650 ATP5G3P48201 142 aa12.71□□□□□ -0.37
AP3D1-211ENST00000591650 IFITM2Q01629 132 aa12.71□□□□□ -0.37
AP3D1-211ENST00000591650 OR4B1Q8NGF8 309 aa12.71□□□□□ -0.37
AP3D1-211ENST00000591650 GNG13Q9P2W3 67 aa12.71□□□□□ -0.37
AP3D1-211ENST00000591650 ARL2-SNX15V9GYD0 113 aa12.71□□□□□ -0.37
AP3D1-211ENST00000591650 LOC102724200A0A096LPH7 203 aaPredicted RBP12.71□□□□□ -0.38
AP3D1-211ENST00000591650 A8MTW9 85 aa12.71□□□□□ -0.38
AP3D1-211ENST00000591650 TEX46H3BTG2 121 aa12.71□□□□□ -0.38
AP3D1-211ENST00000591650 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.38
AP3D1-211ENST00000591650 C5orf17Q8NAS9 161 aa12.71□□□□□ -0.38
AP3D1-211ENST00000591650 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 NPIPB6E9PJ23 425 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 CSN1S1P47710 185 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 ERCC8Q13216 396 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 CST9LP1Q5W188 147 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 OR10J6PQ8NGY7 276 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 CMTM2Q8TAZ6 248 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 FAM210AQ96ND0 272 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 VGLL1Q99990 258 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 MANBALQ9NQG1 85 aa12.7□□□□□ -0.38
AP3D1-211ENST00000591650 DUSP14O95147 198 aaKnown RBP12.69□□□□□ -0.38
AP3D1-211ENST00000591650 NMBP08949 121 aa12.69□□□□□ -0.38
AP3D1-211ENST00000591650 PPT1P50897 306 aa12.69□□□□□ -0.38
AP3D1-211ENST00000591650 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
AP3D1-211ENST00000591650 RXFP4Q8TDU9 374 aa12.69□□□□□ -0.38
AP3D1-211ENST00000591650 SLC35B3Q9H1N7 401 aa12.69□□□□□ -0.38
AP3D1-211ENST00000591650 NBEAL2Q6ZNJ1 2754 aa12.69□□□□□ -0.38
AP3D1-211ENST00000591650 TENM3Q9P273 2699 aa12.68□□□□□ -0.38
AP3D1-211ENST00000591650 TCRAP04437 139 aa12.68□□□□□ -0.38
AP3D1-211ENST00000591650 CCDC28AQ8IWP9 274 aa12.68□□□□□ -0.38
AP3D1-211ENST00000591650 GIG44P09565 113 aaPredicted RBP12.67□□□□□ -0.38
AP3D1-211ENST00000591650 FXYD7P58549 80 aa12.67□□□□□ -0.38
AP3D1-211ENST00000591650 NDUFA5Q16718 116 aa12.67□□□□□ -0.38
AP3D1-211ENST00000591650 HAGHQ16775 308 aa12.67□□□□□ -0.38
AP3D1-211ENST00000591650 Q8TAT8 98 aa12.67□□□□□ -0.38
AP3D1-211ENST00000591650 CLUHP3Q96NS8 147 aa12.67□□□□□ -0.38
AP3D1-211ENST00000591650 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
AP3D1-211ENST00000591650 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
AP3D1-211ENST00000591650 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
AP3D1-211ENST00000591650 HUWE1Q7Z6Z7 4374 aaKnown RBP12.66□□□□□ -0.38
AP3D1-211ENST00000591650 COL7A1Q02388 2944 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 TRAV8-1A0A0A6YYK1 113 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 C11orf94C9JXX5 98 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 CA1P00915 261 aaPredicted RBP12.66□□□□□ -0.38
AP3D1-211ENST00000591650 IFNA1P01562 189 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 BCL2P10415 239 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 APOC4P55056 127 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 C9orf47Q6ZRZ4 202 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 SBSPONQ8IVN8 264 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 ASCL2Q99929 193 aa12.66□□□□□ -0.38
AP3D1-211ENST00000591650 KIR2DL5BA0A0G2JN68 375 aa12.65□□□□□ -0.38
AP3D1-211ENST00000591650 KIR2DL5BA0A0G2JPC4 375 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms