RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 PCNPQ8WW12 178 aaKnown RBP4.42□□□□□ -1.7
LDLRAD4-213ENST00000590115 MRPL32Q9BYC8 188 aaKnown RBP4.42□□□□□ -1.7
LDLRAD4-213ENST00000590115 OR51M1Q9H341 326 aa4.42□□□□□ -1.7
LDLRAD4-213ENST00000590115 SAV1Q9H4B6 383 aaPredicted RBP4.42□□□□□ -1.7
LDLRAD4-213ENST00000590115 SRD5A3Q9H8P0 318 aa4.42□□□□□ -1.7
LDLRAD4-213ENST00000590115 HSPG2P98160 4391 aa4.42□□□□□ -1.7
LDLRAD4-213ENST00000590115 HELTA6NFD8 242 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 ISLRO14498 428 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 ZNF253O75346 499 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 FABP1P07148 127 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 NBEAP1P0C6P0 100 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 CT45A10P0DMU9 189 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 HLA-DRB4P13762 266 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 RPL7P18124 248 aaKnown RBP4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 CDC34P49427 236 aaPredicted RBP4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 PSMB3P49720 205 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 GNG5P63218 68 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 PSG3Q16557 428 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 ACOT6Q3I5F7 207 aaPredicted RBP4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 LCN15Q6UWW0 184 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 ALKAL2Q6UX46 152 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 Q6ZRG5 221 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 RBPMS2Q6ZRY4 209 aaKnown RBP4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 SLC51BQ86UW2 128 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 C1orf158Q8N1D5 194 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 SCGB1C1Q8TD33 95 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 LINC00476Q8WZB0 136 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 GNPNAT1Q96EK6 184 aaPredicted RBP4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 LINC00479Q96M42 142 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 PFDN5Q99471 154 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 VGLL1Q99990 258 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 OVOL2Q9BRP0 275 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 PAXXQ9BUH6 204 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 SLC35B3Q9H1N7 401 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 HLA-DRB4X5D2U9 266 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 X6R8D5 127 aa4.41□□□□□ -1.7
LDLRAD4-213ENST00000590115 IGKV2-40A0A087WW87 121 aaPredicted RBP4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 CTXND1A0A1B0GTU2 59 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 KANTRA0A1W2PQU2 76 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 PLAC8L1A1L4L8 177 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 OR4C46A6NHA9 309 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 FAM74A7A6NL05 159 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 C9JQL5 133 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 NPIPB6E9PJ23 425 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 C17orf112F2Z3M2 114 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 IGKV2D-40P01614 121 aaPredicted RBP4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 RPL35AP18077 110 aaKnown RBP4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 S100A1P23297 94 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 ATP5G3P48201 142 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 CNN1P51911 297 aaKnown RBP4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 FXYD7P58549 80 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 RHOBP62745 196 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 RAB31Q13636 194 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 ICAM4Q14773 271 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 ACTL10Q5JWF8 245 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 BPIFA4PQ86YQ2 179 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 ZFAND2AQ8N6M9 145 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 OR8A1Q8NGG7 326 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 BLNKQ8WV28 456 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 CLUHP3Q96NS8 147 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 GPR82Q96P67 336 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 AGPAT4-IT1Q9H0P7 198 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 Q9H3A6 140 aa4.4□□□□□ -1.71
LDLRAD4-213ENST00000590115 TRAV8-1A0A0A6YYK1 113 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 BORCS7-ASMTA0A0B4J1R7 106 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 TRAV1-1A0A0B4J248 108 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 MAP1LC3B2A6NCE7 125 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 DIRC3C9JPN6 131 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 NMBP08949 121 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 TPT1P13693 172 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 NUP62P37198 522 aaPredicted RBP4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 GALR1P47211 349 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 ZNF80P51504 273 aaPredicted RBP4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 RANP62826 216 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 RPL11P62913 178 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 UBE2L3P68036 154 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 SRSF3P84103 164 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 PDE6HQ13956 83 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 FOXI2Q6ZQN5 318 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 FAM213BQ8TBF2 198 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 RPUSD4Q96CM3 377 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 C16orf92Q96LL3 132 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 LINC00052Q96N35 136 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 MAP1LC3BQ9GZQ8 125 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 TMEM231Q9H6L2 316 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 CLEC5AQ9NY25 188 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 C11orf21Q9P2W6 132 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
LDLRAD4-213ENST00000590115 DMBT1Q9UGM3 2413 aaPredicted RBP4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 TRBV20OR9-2A0A075B6H5 130 aa4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 A0A1B0GV50 99 aa4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 KLLNB2CW77 178 aa4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 TEX46H3BTG2 121 aa4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 M0R2Z0 102 aa4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 DNASE2O00115 360 aaPredicted RBP4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 OR7C2O60412 319 aa4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 ZNF324O75467 553 aaPredicted RBP4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 SCGB2A1O75556 95 aa4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 IGKV3-20P01619 116 aa4.38□□□□□ -1.71
LDLRAD4-213ENST00000590115 IGLV2-8P01709 118 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms