RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 CITED4Q96RK1 184 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 SPATA25Q9BR10 227 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 C1QTNF4Q9BXJ3 329 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 SAV1Q9H4B6 383 aaPredicted RBP10.25□□□□□ -0.77
TRAF4-215ENST00000584944 TMEM167BQ9NRX6 74 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 HLA-DRB4X5D2U9 266 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 TRAV8-2A0A0B4J237 113 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 MAP1LC3B2A6NCE7 125 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 EIF3GO75821 320 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRAF4-215ENST00000584944 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 GCHFRP30047 84 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 RAB5CP51148 216 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 ICAM4Q14773 271 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 SBSPONQ8IVN8 264 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 LYPD1Q8N2G4 141 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 SFT2D1Q8WV19 159 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 C20orf173Q96LM9 149 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 MAP1LC3BQ9GZQ8 125 aa10.24□□□□□ -0.77
TRAF4-215ENST00000584944 A0A0J9YX75 114 aa10.23□□□□□ -0.77
TRAF4-215ENST00000584944 F6UB75 175 aa10.23□□□□□ -0.77
TRAF4-215ENST00000584944 H3BMM0 161 aa10.23□□□□□ -0.77
TRAF4-215ENST00000584944 TRPT1Q86TN4 253 aaKnown RBP10.23□□□□□ -0.77
TRAF4-215ENST00000584944 EXOC3-AS1Q8N2X6 119 aa10.23□□□□□ -0.77
TRAF4-215ENST00000584944 RXFP4Q8TDU9 374 aa10.23□□□□□ -0.77
TRAF4-215ENST00000584944 SAT2Q96F10 170 aaPredicted RBP10.23□□□□□ -0.77
TRAF4-215ENST00000584944 HUWE1Q7Z6Z7 4374 aaKnown RBP10.23□□□□□ -0.77
TRAF4-215ENST00000584944 ZNF705FA8MVS1 300 aaPredicted RBP10.22□□□□□ -0.77
TRAF4-215ENST00000584944 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
TRAF4-215ENST00000584944 HLA-DMBP28068 263 aa10.22□□□□□ -0.77
TRAF4-215ENST00000584944 CNN1P51911 297 aaKnown RBP10.22□□□□□ -0.77
TRAF4-215ENST00000584944 OR8A1Q8NGG7 326 aa10.22□□□□□ -0.77
TRAF4-215ENST00000584944 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
TRAF4-215ENST00000584944 PHYHIPLQ96FC7 376 aa10.22□□□□□ -0.77
TRAF4-215ENST00000584944 RCHY1Q96PM5 261 aa10.22□□□□□ -0.77
TRAF4-215ENST00000584944 Q9H3A6 140 aa10.22□□□□□ -0.77
TRAF4-215ENST00000584944 RPH3ALQ9UNE2 315 aa10.22□□□□□ -0.77
TRAF4-215ENST00000584944 A0A1B0GV50 99 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 K7EQM0 130 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 NDUFB4O95168 129 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 ZNF705DP0CH99 300 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-215ENST00000584944 ZNF705BP0CI00 300 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-215ENST00000584944 TSPOP30536 169 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 FGF8P55075 233 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-215ENST00000584944 DEFB1P60022 68 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 DEFB135Q30KP9 77 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 Q6ZWC4 215 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 OTORQ9NRC9 128 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 U3KQK5 164 aa10.21□□□□□ -0.77
TRAF4-215ENST00000584944 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.78
TRAF4-215ENST00000584944 DNAH7Q8WXX0 4024 aa10.21□□□□□ -0.78
TRAF4-215ENST00000584944 PGPA6NDG6 321 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 SPRY2O43597 315 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 IFNA7P01567 189 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 AMBPP02760 352 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 SLC25A5P05141 298 aaKnown RBP10.2□□□□□ -0.78
TRAF4-215ENST00000584944 FHITP49789 147 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 TMEM78Q5T7P6 136 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 GDF5OSQ5U4N7 250 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 LINC00322Q6ZN03 302 aaPredicted RBP10.2□□□□□ -0.78
TRAF4-215ENST00000584944 ZNF503Q96F45 646 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 TMEM208Q9BTX3 173 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 XCL2Q9UBD3 114 aa10.2□□□□□ -0.78
TRAF4-215ENST00000584944 ZNF705EA8MWA4 302 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-215ENST00000584944 M0R3E3 92 aa10.19□□□□□ -0.78
TRAF4-215ENST00000584944 HBE1P02100 147 aa10.19□□□□□ -0.78
TRAF4-215ENST00000584944 PPT1P50897 306 aa10.19□□□□□ -0.78
TRAF4-215ENST00000584944 FXYD7P58549 80 aa10.19□□□□□ -0.78
TRAF4-215ENST00000584944 UBE2G2P60604 165 aa10.19□□□□□ -0.78
TRAF4-215ENST00000584944 NKX6-2Q9C056 277 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-215ENST00000584944 DYNC2H1Q8NCM8 4307 aaKnown RBP10.19□□□□□ -0.78
TRAF4-215ENST00000584944 BOLA2-SMG1P6H3BVE0 249 aa10.18□□□□□ -0.78
TRAF4-215ENST00000584944 PRB4P10163 310 aaPredicted RBP10.18□□□□□ -0.78
TRAF4-215ENST00000584944 ZNF726P1Q15940 193 aa10.18□□□□□ -0.78
TRAF4-215ENST00000584944 CST9LP1Q5W188 147 aa10.18□□□□□ -0.78
TRAF4-215ENST00000584944 ALKAL2Q6UX46 152 aa10.18□□□□□ -0.78
TRAF4-215ENST00000584944 SSX7Q7RTT5 188 aa10.18□□□□□ -0.78
TRAF4-215ENST00000584944 CLUHP3Q96NS8 147 aa10.18□□□□□ -0.78
TRAF4-215ENST00000584944 TM2D3Q9BRN9 247 aa10.18□□□□□ -0.78
TRAF4-215ENST00000584944 GOLT1BQ9Y3E0 138 aa10.18□□□□□ -0.78
TRAF4-215ENST00000584944 IGHV3OR16-12A0A075B7B8 117 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 IGKV2-40A0A087WW87 121 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-215ENST00000584944 INSP01308 110 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 IGKV2D-40P01614 121 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-215ENST00000584944 LEPP41159 167 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 SULT1A2P50226 295 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 SPINK13Q1W4C9 94 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 C5orf17Q8NAS9 161 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 LINC00477Q96M19 166 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 SLC35B3Q9H1N7 401 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 TMPRSS5Q9H3S3 457 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 RETNQ9HD89 108 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 TP53TG1Q9Y2A0 90 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
TRAF4-215ENST00000584944 A0A1W2PRE2 83 aa10.16□□□□□ -0.78
TRAF4-215ENST00000584944 PRAC2D3DTV9 90 aa10.16□□□□□ -0.78
TRAF4-215ENST00000584944 F6UZH7 168 aa10.16□□□□□ -0.78
TRAF4-215ENST00000584944 IFNA1P01562 189 aa10.16□□□□□ -0.78
TRAF4-215ENST00000584944 SUMO1P63165 101 aaKnown RBP10.16□□□□□ -0.78
TRAF4-215ENST00000584944 BLOC1S1P78537 153 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms