RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 EMP1P54849 157 aa8.98□□□□□ -0.97
CDK5RAP3-222ENST00000581708 H2BFSP57053 126 aa8.98□□□□□ -0.97
CDK5RAP3-222ENST00000581708 TAS2R60P59551 318 aa8.98□□□□□ -0.97
CDK5RAP3-222ENST00000581708 NHLH2Q02577 135 aa8.98□□□□□ -0.97
CDK5RAP3-222ENST00000581708 ZNF493Q6ZR52 646 aa8.98□□□□□ -0.97
CDK5RAP3-222ENST00000581708 PPP1R1CQ8WVI7 109 aa8.98□□□□□ -0.97
CDK5RAP3-222ENST00000581708 OR5AC2Q9NZP5 309 aa8.98□□□□□ -0.97
CDK5RAP3-222ENST00000581708 VPS13DQ5THJ4 4388 aa8.97□□□□□ -0.97
CDK5RAP3-222ENST00000581708 C17orf112F2Z3M2 114 aa8.97□□□□□ -0.97
CDK5RAP3-222ENST00000581708 H7BYZ3 331 aa8.97□□□□□ -0.97
CDK5RAP3-222ENST00000581708 MPC2O95563 127 aa8.97□□□□□ -0.97
CDK5RAP3-222ENST00000581708 LRRC37A5PQ49AS3 106 aa8.97□□□□□ -0.97
CDK5RAP3-222ENST00000581708 MRPL32Q9BYC8 188 aaKnown RBP8.97□□□□□ -0.97
CDK5RAP3-222ENST00000581708 WDR61Q9GZS3 305 aaKnown RBP8.97□□□□□ -0.97
CDK5RAP3-222ENST00000581708 TRAV5A0A0B4J249 113 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 NPIPB6E9PJ23 425 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 SLC17A3O00476 420 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 DAD1P61803 113 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 ZNF767PQ75MW2 155 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 BAP18Q8IXM2 172 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 RPP25LQ8N5L8 163 aaKnown RBP8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 C16orf74Q96GX8 76 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 LINC01587Q99440 93 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 ATP5SQ99766 215 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 ZNF586Q9NXT0 402 aa8.96□□□□□ -0.98
CDK5RAP3-222ENST00000581708 TRAV12-2A0A075B6T6 113 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 ZNF705GA8MUZ8 300 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 PTTG1O95997 202 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 LEPP41159 167 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 CLINT1Q14677 625 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 THAP6Q8TBB0 222 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 LINC00477Q96M19 166 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 PARD6GQ9BYG4 376 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 AAMDCQ9H7C9 122 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 HSPB11Q9Y547 144 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 TIMM9Q9Y5J7 89 aa8.95□□□□□ -0.98
CDK5RAP3-222ENST00000581708 IFNA5P01569 189 aa8.94□□□□□ -0.98
CDK5RAP3-222ENST00000581708 NMBP08949 121 aa8.94□□□□□ -0.98
CDK5RAP3-222ENST00000581708 RPL12P30050 165 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-222ENST00000581708 POM121L12Q8N7R1 296 aa8.94□□□□□ -0.98
CDK5RAP3-222ENST00000581708 TMEM263Q8WUH6 116 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-222ENST00000581708 TIMM8BQ9Y5J9 83 aaPredicted RBP8.94□□□□□ -0.98
CDK5RAP3-222ENST00000581708 PLAC8L1A1L4L8 177 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 PRAC2D3DTV9 90 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 H3BTX0 84 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 NDUFB4O95168 129 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 SNRPCP09234 159 aaKnown RBP8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 NBEAP1P0C6P0 100 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 CCDC28AQ8IWP9 274 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 LYPD1Q8N2G4 141 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 C15orf53Q8NAA6 179 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 SCGB1C1Q8TD33 95 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 ASB13Q8WXK3 278 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 FAM167A-AS1Q96KT0 104 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 SLC25A2Q9BXI2 301 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 OR51M1Q9H341 326 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 FUT9Q9Y231 359 aa8.93□□□□□ -0.98
CDK5RAP3-222ENST00000581708 TRBV7-9A0A0J9YWB2 115 aa8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 CBY3A6NI87 242 aa8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 SLC25A5P05141 298 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 CT45A10P0DMU9 189 aa8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 AZU1P20160 251 aa8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 RNF212Q495C1 297 aa8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 GCSAMLQ5JQS6 135 aa8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 GFI1BQ5VTD9 330 aa8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 RNASE8Q8TDE3 154 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-222ENST00000581708 BIRC6Q9NR09 4857 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 ATP5G1P05496 136 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 PYYP10082 97 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 ATP5G3P48201 142 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 FAM3BP58499 235 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 TAS2R45P59539 299 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 C9orf47Q6ZRZ4 202 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 MIR17HGQ75NE6 70 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 RNF141Q8WVD5 230 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 FAM19A4Q96LR4 140 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 LINC00467Q9BRT7 94 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 PAXXQ9BUH6 204 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 MBD2Q9UBB5 411 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 KMT2AQ03164 3969 aa8.91□□□□□ -0.98
CDK5RAP3-222ENST00000581708 KLLNB2CW77 178 aa8.9□□□□□ -0.98
CDK5RAP3-222ENST00000581708 M0R3E3 92 aa8.9□□□□□ -0.98
CDK5RAP3-222ENST00000581708 CRISP2P16562 243 aa8.9□□□□□ -0.98
CDK5RAP3-222ENST00000581708 BLNKQ8WV28 456 aa8.9□□□□□ -0.98
CDK5RAP3-222ENST00000581708 FXYD5Q96DB9 178 aa8.9□□□□□ -0.98
CDK5RAP3-222ENST00000581708 PLA2G2EQ9NZK7 142 aa8.9□□□□□ -0.98
CDK5RAP3-222ENST00000581708 ALG5Q9Y673 324 aa8.9□□□□□ -0.98
CDK5RAP3-222ENST00000581708 C7orf71A4D174 169 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 PRM2P04554 102 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 DEFB130BP0DP73 79 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 DEFB130AP0DP74 79 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 HTN1P15515 57 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 HTN3P15516 51 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 CSN1S1P47710 185 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 DAZ2Q13117 558 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 ICAM4Q14773 271 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 KHDC3LQ587J8 217 aa8.89□□□□□ -0.99
CDK5RAP3-222ENST00000581708 FFAR4Q5NUL3 377 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms