RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ITPR3Q14573 2671 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 TRBV7-1A0A0A6YYK4 115 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 TRBV9A0A0B4J1U6 114 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 TRAV25A0A0B4J276 109 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 A0A0G2JLM5 398 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 KRBOX1C9JBD0 128 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 CLDN34H7C241 214 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 K7EIM0 57 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 CT45A10P0DMU9 189 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 OR10J1P30954 320 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 LEPP41159 167 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 CDC34P49427 236 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-222ENST00000570139 PSMB3P49720 205 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 RND2P52198 227 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 YPEL3P61236 119 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-222ENST00000570139 SLC35B1P78383 322 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 LY6EQ16553 131 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 SUN5Q8TC36 379 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 EEF1AKMT3Q96AZ1 226 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 USMG5Q96IX5 58 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 TXNDC17Q9BRA2 123 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 FAM103A1Q9BTL3 118 aaKnown RBP5.34□□□□□ -1.55
CNOT1-222ENST00000570139 JPT2Q9H910 190 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 SDF2L1Q9HCN8 221 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 MANBALQ9NQG1 85 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 RPRMQ9NS64 109 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 TNFRSF19Q9NS68 423 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 C21orf62Q9NYP8 219 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 ARL2-SNX15V9GYD0 113 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 MAP1AP78559 2803 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-222ENST00000570139 POLQO75417 2590 aa5.34□□□□□ -1.55
CNOT1-222ENST00000570139 MYO9AB2RTY4 2548 aa5.34□□□□□ -1.56
CNOT1-222ENST00000570139 AKAP9Q99996 3911 aa5.34□□□□□ -1.56
CNOT1-222ENST00000570139 SPG11Q96JI7 2443 aa5.34□□□□□ -1.56
CNOT1-222ENST00000570139 IGKV1OR2-108A0A075B7D4 117 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 MDFIC2A0A1B0GVS7 189 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 MAP1LC3B2A6NCE7 125 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 E9PLD3 99 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 GNG7O60262 68 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 CXorf1O96002 111 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 LINC00869P0C866 280 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 IGLC1P0CG04 106 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 APELAP0DMC3 54 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 PEA15Q15121 130 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 KHDC3LQ587J8 217 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 MIC13Q5XKP0 118 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 RPP25LQ8N5L8 163 aaKnown RBP5.33□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF418Q8TF45 676 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-222ENST00000570139 SFT2D1Q8WV19 159 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 FAM210AQ96ND0 272 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 DUX3Q96PT4 197 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 MAP1LC3BQ9GZQ8 125 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 FUT9Q9Y231 359 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 CREBBPQ92793 2442 aa5.33□□□□□ -1.56
CNOT1-222ENST00000570139 ITPR2Q14571 2701 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 IGKV1D-37A0A075B6S9 117 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 NUPL2O15504 423 aaKnown RBP5.32□□□□□ -1.56
CNOT1-222ENST00000570139 COX7A2P2O60397 106 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 OR2J3O76001 311 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 YIF1AO95070 293 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 AMBPP02760 352 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 OR5G3P0C626 314 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 STAG3L2P0CL84 134 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 ZP3P21754 424 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 RHOGP84095 191 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 C15orf32Q32M92 178 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 Q56UQ5 140 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 C9orf66Q5T8R8 295 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 C10orf113Q5VZT2 155 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 SLC7A5P1Q8MH63 180 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 Q8N2B8 174 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 SIGLECL1Q8N7X8 197 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 Q8NBF4 154 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 OR5T1Q8NG75 326 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 OR51G1Q8NGK1 321 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 LITAFQ99732 161 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF355PQ9NSJ1 428 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 WNK2Q9Y3S1 2297 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 TEX15Q9BXT5 2789 aa5.32□□□□□ -1.56
CNOT1-222ENST00000570139 IGHV3-16A0A0C4DH30 117 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 LOC100131303A0A0U1RQF7 123 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 RBFOX3A6NFN3 312 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 I3L521 148 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 HYPMO75409 117 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 HSPB1P04792 205 aaKnown RBP5.31□□□□□ -1.56
CNOT1-222ENST00000570139 RD3LP0DJH9 198 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 C8orf88P0DMB2 117 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 CD99P14209 185 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 ATP5G2Q06055 141 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 GUK1Q16774 197 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF506Q5JVG8 444 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 FAM78BQ5VT40 261 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF600Q6ZNG1 722 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 C19orf35Q6ZS72 473 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF502Q8TBZ5 544 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 Q8WTZ3 238 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 TCEAL7Q9BRU2 100 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 NKX6-2Q9C056 277 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-222ENST00000570139 EIF5A2Q9GZV4 153 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms