RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CEACAM4O75871 244 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 FABP2P12104 132 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 ZNF491Q8N8L2 437 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 MSRB2Q9Y3D2 182 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 WI2-2373I1.2A0A1W2PRP0 233 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 K7EIM0 57 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 NPYP01303 97 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 SMIM13P0DJ93 91 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 PDE6HQ13956 83 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
COMMD4-215ENST00000566843 SPENQ96T58 3664 aaKnown RBP12.31□□□□□ -0.44
COMMD4-215ENST00000566843 M0R3E3 92 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 IGLV1-47P01700 117 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 NMUP48645 174 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 FXYD7P58549 80 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 PRSS57Q6UWY2 283 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 DKK2Q9UBU2 259 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 IGHV1-3A0A0C4DH29 117 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 SAMD5Q5TGI4 173 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 TMEM108Q6UXF1 575 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 RNF125Q96EQ8 232 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 ACACAQ13085 2346 aa12.31□□□□□ -0.44
COMMD4-215ENST00000566843 PIEZO1Q92508 2521 aa12.3□□□□□ -0.44
COMMD4-215ENST00000566843 TCTAP57738 103 aa12.3□□□□□ -0.44
COMMD4-215ENST00000566843 SELENOKQ9Y6D0 94 aa12.3□□□□□ -0.44
COMMD4-215ENST00000566843 FBLL1A6NHQ2 334 aaKnown RBP12.3□□□□□ -0.44
COMMD4-215ENST00000566843 CKS2P33552 79 aa12.3□□□□□ -0.44
COMMD4-215ENST00000566843 TMEM95Q3KNT9 176 aa12.3□□□□□ -0.44
COMMD4-215ENST00000566843 CCL17Q92583 94 aa12.3□□□□□ -0.44
COMMD4-215ENST00000566843 FBXL15Q9H469 300 aa12.3□□□□□ -0.44
COMMD4-215ENST00000566843 TMSB15BA0A087X1C1 80 aa12.29□□□□□ -0.44
COMMD4-215ENST00000566843 RNF5Q99942 180 aa12.29□□□□□ -0.44
COMMD4-215ENST00000566843 DSPP15924 2871 aaKnown RBP12.29□□□□□ -0.44
COMMD4-215ENST00000566843 BOD1L1Q8NFC6 3051 aa12.29□□□□□ -0.44
COMMD4-215ENST00000566843 VSTM5A8MXK1 200 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 SMKR1H3BMG3 65 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 IGLC6P0CF74 106 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 PHLDA1Q8WV24 401 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-215ENST00000566843 AAMDCQ9H7C9 122 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 HHLA3Q9XRX5 114 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 BUB1B-PAK6H3BSN5 160 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-215ENST00000566843 FCGR2BP31994 310 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-215ENST00000566843 FXYD2P54710 66 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 ODF1Q14990 250 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 PLGLAQ15195 96 aa12.28□□□□□ -0.44
COMMD4-215ENST00000566843 IL4P05112 153 aa12.27□□□□□ -0.44
COMMD4-215ENST00000566843 SRSF2Q01130 221 aaKnown RBP12.27□□□□□ -0.44
COMMD4-215ENST00000566843 BCL6BQ8N143 479 aaPredicted RBP12.27□□□□□ -0.44
COMMD4-215ENST00000566843 RNF185Q96GF1 192 aa12.27□□□□□ -0.44
COMMD4-215ENST00000566843 PSMG3-AS1Q96PY0 264 aa12.27□□□□□ -0.44
COMMD4-215ENST00000566843 IGKV2D-26A0A0A0MRZ7 120 aa12.27□□□□□ -0.45
COMMD4-215ENST00000566843 EGR2P11161 476 aaPredicted RBP12.27□□□□□ -0.45
COMMD4-215ENST00000566843 HLA-DRB4P13762 266 aa12.27□□□□□ -0.45
COMMD4-215ENST00000566843 FCER1GP30273 86 aa12.27□□□□□ -0.45
COMMD4-215ENST00000566843 LINC01559Q495D7 138 aa12.27□□□□□ -0.45
COMMD4-215ENST00000566843 S100A7AQ86SG5 101 aa12.27□□□□□ -0.45
COMMD4-215ENST00000566843 ZNF575Q86XF7 245 aa12.27□□□□□ -0.45
COMMD4-215ENST00000566843 HLA-DRB4X5D2U9 266 aa12.27□□□□□ -0.45
COMMD4-215ENST00000566843 MALRD1Q5VYJ5 2156 aa12.27□□□□□ -0.45
COMMD4-215ENST00000566843 EVI2AP22794 236 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 TWIST1Q15672 202 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 ZNF562Q6V9R5 426 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 PRR25Q96S07 402 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 MAP1LC3AQ9H492 121 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 SVILO95425 2214 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 SCGB1A1P11684 91 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 GCSHP23434 173 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 CHAC1Q9BUX1 264 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 TM2D2Q9BX73 214 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 RAB1BQ9H0U4 201 aa12.26□□□□□ -0.45
COMMD4-215ENST00000566843 VGLL1Q99990 258 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 CNFNQ9BYD5 112 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 PRRC2CQ9Y520 2896 aaKnown RBP12.25□□□□□ -0.45
COMMD4-215ENST00000566843 TEX48A0A1B0GUV7 120 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 PPIAL4GP0DN37 164 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 SRSF1Q07955 248 aaKnown RBP eCLIP12.25□□□□□ -0.45
COMMD4-215ENST00000566843 TM4SF20Q53R12 229 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 SAMD13Q5VXD3 122 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 WFDC3Q8IUB2 231 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 RAXQ9Y2V3 346 aa12.25□□□□□ -0.45
COMMD4-215ENST00000566843 ABCA1O95477 2261 aa12.24□□□□□ -0.45
COMMD4-215ENST00000566843 IGFL3Q6UXB1 125 aa12.24□□□□□ -0.45
COMMD4-215ENST00000566843 NXT2Q9NPJ8 142 aaKnown RBP12.24□□□□□ -0.45
COMMD4-215ENST00000566843 SMPXQ9UHP9 88 aa12.24□□□□□ -0.45
COMMD4-215ENST00000566843 IGF2RP11717 2491 aa12.24□□□□□ -0.45
COMMD4-215ENST00000566843 IGKV2-40A0A087WW87 121 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-215ENST00000566843 LY6LH3BQJ8 138 aa12.23□□□□□ -0.45
COMMD4-215ENST00000566843 IGKV2D-40P01614 121 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-215ENST00000566843 IGKCP01834 107 aa12.23□□□□□ -0.45
COMMD4-215ENST00000566843 LEPP41159 167 aa12.23□□□□□ -0.45
COMMD4-215ENST00000566843 ZNF80P51504 273 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-215ENST00000566843 DLX1P56177 255 aa12.23□□□□□ -0.45
COMMD4-215ENST00000566843 BSPH1Q075Z2 132 aa12.23□□□□□ -0.45
COMMD4-215ENST00000566843 RNASE6Q93091 150 aaKnown RBP12.23□□□□□ -0.45
COMMD4-215ENST00000566843 ZNF48Q96MX3 618 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-215ENST00000566843 ATMQ13315 3056 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 361.2 ms