RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 HLA-DRB4P13762 266 aa13.76□□□□□ -0.21
NME3-207ENST00000564628 RHOBP62745 196 aa13.76□□□□□ -0.21
NME3-207ENST00000564628 MORN5Q5VZ52 161 aa13.76□□□□□ -0.21
NME3-207ENST00000564628 C10orf113Q5VZT2 155 aa13.76□□□□□ -0.21
NME3-207ENST00000564628 MORN3Q6PF18 240 aaPredicted RBP13.76□□□□□ -0.21
NME3-207ENST00000564628 HLA-DRB4X5D2U9 266 aa13.76□□□□□ -0.21
NME3-207ENST00000564628 PCLOQ9Y6V0 5065 aa13.75□□□□□ -0.21
NME3-207ENST00000564628 TRAV8-2A0A0B4J237 113 aa13.75□□□□□ -0.21
NME3-207ENST00000564628 H3BMM0 161 aa13.75□□□□□ -0.21
NME3-207ENST00000564628 CA1P00915 261 aaPredicted RBP13.75□□□□□ -0.21
NME3-207ENST00000564628 NDUFA5Q16718 116 aa13.75□□□□□ -0.21
NME3-207ENST00000564628 FOXI2Q6ZQN5 318 aa13.75□□□□□ -0.21
NME3-207ENST00000564628 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
NME3-207ENST00000564628 C20orf173Q96LM9 149 aa13.75□□□□□ -0.21
NME3-207ENST00000564628 SAV1Q9H4B6 383 aaPredicted RBP13.75□□□□□ -0.21
NME3-207ENST00000564628 CTXND1A0A1B0GTU2 59 aa13.74□□□□□ -0.21
NME3-207ENST00000564628 HBE1P02100 147 aa13.74□□□□□ -0.21
NME3-207ENST00000564628 DEFB1P60022 68 aa13.74□□□□□ -0.21
NME3-207ENST00000564628 GDF5OSQ5U4N7 250 aa13.74□□□□□ -0.21
NME3-207ENST00000564628 MBD3L1Q8WWY6 194 aa13.74□□□□□ -0.21
NME3-207ENST00000564628 LINC00052Q96N35 136 aa13.74□□□□□ -0.21
NME3-207ENST00000564628 CLUHP3Q96NS8 147 aa13.74□□□□□ -0.21
NME3-207ENST00000564628 C11orf68Q9H3H3 251 aaKnown RBP13.74□□□□□ -0.21
NME3-207ENST00000564628 CDC34P49427 236 aaPredicted RBP13.73□□□□□ -0.21
NME3-207ENST00000564628 FHITP49789 147 aa13.73□□□□□ -0.21
NME3-207ENST00000564628 SPATA31B1PQ5VZV4 182 aa13.73□□□□□ -0.21
NME3-207ENST00000564628 FAM122CQ6P4D5 195 aa13.73□□□□□ -0.21
NME3-207ENST00000564628 SFT2D1Q8WV19 159 aa13.73□□□□□ -0.21
NME3-207ENST00000564628 RARRES2Q99969 163 aa13.73□□□□□ -0.21
NME3-207ENST00000564628 MRPL32Q9BYC8 188 aaKnown RBP13.73□□□□□ -0.21
NME3-207ENST00000564628 HECTD4Q9Y4D8 3996 aa13.73□□□□□ -0.21
NME3-207ENST00000564628 TRAV1-1A0A0B4J248 108 aa13.72□□□□□ -0.21
NME3-207ENST00000564628 IGLC2P0DOY2 106 aa13.72□□□□□ -0.21
NME3-207ENST00000564628 TCTAP57738 103 aa13.72□□□□□ -0.21
NME3-207ENST00000564628 TAS2R45P59539 299 aa13.72□□□□□ -0.21
NME3-207ENST00000564628 FAM78BQ5VT40 261 aa13.72□□□□□ -0.21
NME3-207ENST00000564628 BPIFA4PQ86YQ2 179 aa13.72□□□□□ -0.21
NME3-207ENST00000564628 C11orf45Q8TAV5 145 aa13.72□□□□□ -0.21
NME3-207ENST00000564628 A0A0J9YX75 114 aa13.71□□□□□ -0.21
NME3-207ENST00000564628 A8MTW9 85 aa13.71□□□□□ -0.21
NME3-207ENST00000564628 GCSAMLQ5JQS6 135 aa13.71□□□□□ -0.21
NME3-207ENST00000564628 CSNK1G2-AS1Q8NCQ2 148 aa13.71□□□□□ -0.21
NME3-207ENST00000564628 LYPD6BQ8NI32 183 aa13.71□□□□□ -0.21
NME3-207ENST00000564628 PCNPQ8WW12 178 aaKnown RBP13.71□□□□□ -0.21
NME3-207ENST00000564628 RAB24Q969Q5 203 aa13.71□□□□□ -0.21
NME3-207ENST00000564628 HRH4Q9H3N8 390 aa13.71□□□□□ -0.21
NME3-207ENST00000564628 FUT9Q9Y231 359 aa13.71□□□□□ -0.21
NME3-207ENST00000564628 NANOS2P60321 138 aaKnown RBP13.7□□□□□ -0.22
NME3-207ENST00000564628 IGFL4Q6B9Z1 124 aa13.7□□□□□ -0.22
NME3-207ENST00000564628 LCN15Q6UWW0 184 aa13.7□□□□□ -0.22
NME3-207ENST00000564628 MED9Q9NWA0 146 aa13.7□□□□□ -0.22
NME3-207ENST00000564628 TRAV5A0A0B4J249 113 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 MAP1LC3B2A6NCE7 125 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 LINC00862A6NCI5 91 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 F6UB75 175 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 RNF182Q8N6D2 247 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 C2CD4CQ8TF44 421 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 MAP1LC3BQ9GZQ8 125 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 ZNF331Q9NQX6 463 aaPredicted RBP13.69□□□□□ -0.22
NME3-207ENST00000564628 VPS13DQ5THJ4 4388 aa13.69□□□□□ -0.22
NME3-207ENST00000564628 KIAA1109Q2LD37 5005 aa13.68□□□□□ -0.22
NME3-207ENST00000564628 H3BQ15 152 aa13.68□□□□□ -0.22
NME3-207ENST00000564628 CXorf1O96002 111 aa13.68□□□□□ -0.22
NME3-207ENST00000564628 NUTF2P61970 127 aaKnown RBP13.68□□□□□ -0.22
NME3-207ENST00000564628 ZNF726P1Q15940 193 aa13.68□□□□□ -0.22
NME3-207ENST00000564628 EBLN2Q6P2I7 272 aa13.68□□□□□ -0.22
NME3-207ENST00000564628 SLC50A1Q9BRV3 221 aa13.68□□□□□ -0.22
NME3-207ENST00000564628 TMEM14CQ9P0S9 112 aa13.68□□□□□ -0.22
NME3-207ENST00000564628 SLC17A3O00476 420 aa13.67□□□□□ -0.22
NME3-207ENST00000564628 STAG3L2P0CL84 134 aa13.67□□□□□ -0.22
NME3-207ENST00000564628 STAG3L3P0CL85 134 aa13.67□□□□□ -0.22
NME3-207ENST00000564628 HLA-DMBP28068 263 aa13.67□□□□□ -0.22
NME3-207ENST00000564628 PPT1P50897 306 aa13.67□□□□□ -0.22
NME3-207ENST00000564628 KHDC3LQ587J8 217 aa13.67□□□□□ -0.22
NME3-207ENST00000564628 PQLC2Q6ZP29 291 aa13.67□□□□□ -0.22
NME3-207ENST00000564628 C1QTNF4Q9BXJ3 329 aa13.67□□□□□ -0.22
NME3-207ENST00000564628 PSG3Q16557 428 aa13.66□□□□□ -0.22
NME3-207ENST00000564628 GUK1Q16774 197 aa13.66□□□□□ -0.22
NME3-207ENST00000564628 AMTNQ6UX39 209 aa13.66□□□□□ -0.22
NME3-207ENST00000564628 MIR17HGQ75NE6 70 aa13.66□□□□□ -0.22
NME3-207ENST00000564628 FAM167A-AS1Q96KT0 104 aa13.66□□□□□ -0.22
NME3-207ENST00000564628 ZNF253O75346 499 aa13.65□□□□□ -0.22
NME3-207ENST00000564628 IFNA1P01562 189 aa13.65□□□□□ -0.22
NME3-207ENST00000564628 SNRPCP09234 159 aaKnown RBP13.65□□□□□ -0.22
NME3-207ENST00000564628 ZNF738Q8NE65 137 aa13.65□□□□□ -0.22
NME3-207ENST00000564628 OR4B1Q8NGF8 309 aa13.65□□□□□ -0.22
NME3-207ENST00000564628 SLC25A2Q9BXI2 301 aa13.65□□□□□ -0.22
NME3-207ENST00000564628 ZNF586Q9NXT0 402 aa13.65□□□□□ -0.22
NME3-207ENST00000564628 CLEC5AQ9NY25 188 aa13.65□□□□□ -0.22
NME3-207ENST00000564628 X6R8D5 127 aa13.65□□□□□ -0.22
NME3-207ENST00000564628 RAB19A4D1S5 217 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 C11orf94C9JXX5 98 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 H3BTX0 84 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 DUSP14O95147 198 aaKnown RBP13.64□□□□□ -0.23
NME3-207ENST00000564628 IGKV3-20P01619 116 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 TAGLN2P37802 199 aaKnown RBP13.64□□□□□ -0.23
NME3-207ENST00000564628 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
NME3-207ENST00000564628 PSG9Q00887 426 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 SSX7Q7RTT5 188 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms