RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 OR10J4P0C629 311 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 HIST1H1EP10412 219 aaKnown RBP9.23□□□□□ -0.93
KARS-204ENST00000564578 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
KARS-204ENST00000564578 EIF5AP63241 154 aaKnown RBP9.23□□□□□ -0.93
KARS-204ENST00000564578 BTN1A1Q13410 526 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 DEFB121Q5J5C9 76 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 MRAPQ8TCY5 172 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 C16orf92Q96LL3 132 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 C2orf88Q9BSF0 95 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 ZNF331Q9NQX6 463 aaPredicted RBP9.23□□□□□ -0.93
KARS-204ENST00000564578 OR7C2O60412 319 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 HLA-DMBP28068 263 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 PSMB3P49720 205 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 DEFB1P60022 68 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 SNRPD3P62318 126 aaKnown RBP9.23□□□□□ -0.93
KARS-204ENST00000564578 AKR1C8PQ5T2L2 129 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 LINC00322Q6ZN03 302 aaPredicted RBP9.23□□□□□ -0.93
KARS-204ENST00000564578 RNF182Q8N6D2 247 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 RNF141Q8WVD5 230 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 PAXXQ9BUH6 204 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 COL7A1Q02388 2944 aa9.22□□□□□ -0.93
KARS-204ENST00000564578 RBMY1BA6NDE4 496 aaKnown RBP9.22□□□□□ -0.93
KARS-204ENST00000564578 RBMY1EA6NEQ0 496 aaKnown RBP9.22□□□□□ -0.93
KARS-204ENST00000564578 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
KARS-204ENST00000564578 RBMY1DP0C7P1 496 aaKnown RBP9.22□□□□□ -0.93
KARS-204ENST00000564578 CMC4P56277 68 aaPredicted RBP9.22□□□□□ -0.93
KARS-204ENST00000564578 TAS2R45P59539 299 aa9.22□□□□□ -0.93
KARS-204ENST00000564578 GUK1Q16774 197 aa9.22□□□□□ -0.93
KARS-204ENST00000564578 KHDC3LQ587J8 217 aa9.22□□□□□ -0.93
KARS-204ENST00000564578 SAMD13Q5VXD3 122 aa9.22□□□□□ -0.93
KARS-204ENST00000564578 LCN15Q6UWW0 184 aa9.22□□□□□ -0.93
KARS-204ENST00000564578 SRD5A3Q9H8P0 318 aa9.22□□□□□ -0.93
KARS-204ENST00000564578 FRMD6-AS1P0C7T7 363 aa9.21□□□□□ -0.93
KARS-204ENST00000564578 ARL14EPLP0DKL9 152 aa9.21□□□□□ -0.93
KARS-204ENST00000564578 PQLC2Q6ZP29 291 aa9.21□□□□□ -0.93
KARS-204ENST00000564578 LINC00052Q96N35 136 aa9.21□□□□□ -0.93
KARS-204ENST00000564578 ACTR3CQ9C0K3 210 aaPredicted RBP9.21□□□□□ -0.93
KARS-204ENST00000564578 UMAD1C9J7I0 102 aa9.21□□□□□ -0.94
KARS-204ENST00000564578 ZNF253O75346 499 aa9.21□□□□□ -0.94
KARS-204ENST00000564578 ID1P41134 155 aa9.21□□□□□ -0.94
KARS-204ENST00000564578 GDF5OSQ5U4N7 250 aa9.21□□□□□ -0.94
KARS-204ENST00000564578 BLNKQ8WV28 456 aa9.21□□□□□ -0.94
KARS-204ENST00000564578 KNCNA6PVL3 124 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 F6UB75 175 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
KARS-204ENST00000564578 C4BPBP20851 252 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 UBE2L3P68036 154 aaKnown RBP9.2□□□□□ -0.94
KARS-204ENST00000564578 PDE6HQ13956 83 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 PHYHIPLQ96FC7 376 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 CLUHP3Q96NS8 147 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 SLC50A1Q9BRV3 221 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 TUBA4BQ9H853 241 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 TGP01266 2768 aa9.2□□□□□ -0.94
KARS-204ENST00000564578 CTXND1A0A1B0GTU2 59 aa9.19□□□□□ -0.94
KARS-204ENST00000564578 PSG3Q16557 428 aa9.19□□□□□ -0.94
KARS-204ENST00000564578 NIT2Q9NQR4 276 aa9.19□□□□□ -0.94
KARS-204ENST00000564578 ZNF705FA8MVS1 300 aaPredicted RBP9.19□□□□□ -0.94
KARS-204ENST00000564578 ACTL10Q5JWF8 245 aa9.19□□□□□ -0.94
KARS-204ENST00000564578 EIF5AL1Q6IS14 154 aaKnown RBP9.19□□□□□ -0.94
KARS-204ENST00000564578 EXOC3-AS1Q8N2X6 119 aa9.19□□□□□ -0.94
KARS-204ENST00000564578 TENM3Q9P273 2699 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 H3BMM0 161 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 M0R3E3 92 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 CXorf1O96002 111 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 LINC00614P0C842 121 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 GCHFRP30047 84 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 FGF8P55075 233 aaPredicted RBP9.18□□□□□ -0.94
KARS-204ENST00000564578 RANP62826 216 aaKnown RBP9.18□□□□□ -0.94
KARS-204ENST00000564578 FAM74A1Q5RGS3 127 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 SBSPONQ8IVN8 264 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 FAM213BQ8TBF2 198 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 TMPRSS5Q9H3S3 457 aa9.18□□□□□ -0.94
KARS-204ENST00000564578 A0A0J9YX75 114 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 PRAC2D3DTV9 90 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 ZNF705DP0CH99 300 aaPredicted RBP9.17□□□□□ -0.94
KARS-204ENST00000564578 ZNF705BP0CI00 300 aaPredicted RBP9.17□□□□□ -0.94
KARS-204ENST00000564578 SULT1A2P50226 295 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 ALKAL2Q6UX46 152 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 DPPA3Q6W0C5 159 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 TRPT1Q86TN4 253 aaKnown RBP9.17□□□□□ -0.94
KARS-204ENST00000564578 MBD3L1Q8WWY6 194 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 C14orf144Q96I85 54 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 MAP1LC3B2A6NCE7 125 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 HLA-DRB4P13762 266 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 RPL35AP18077 110 aaKnown RBP9.17□□□□□ -0.94
KARS-204ENST00000564578 PSG9Q00887 426 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 ICAM4Q14773 271 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 FOXI2Q6ZQN5 318 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 ZNF738Q8NE65 137 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 RPUSD4Q96CM3 377 aaKnown RBP9.17□□□□□ -0.94
KARS-204ENST00000564578 B9D2Q9BPU9 175 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 TCEAL7Q9BRU2 100 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 MAP1LC3BQ9GZQ8 125 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 RPH3ALQ9UNE2 315 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 HLA-DRB4X5D2U9 266 aa9.17□□□□□ -0.94
KARS-204ENST00000564578 LOC102724200A0A096LPH7 203 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms