RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 M0R1B8 84 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 FOXS1O43638 330 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 CENPWQ5EE01 88 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 LINC00305Q7Z4B0 112 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 ZNF414Q96IQ9 312 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 ABHD14BQ96IU4 210 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 THADAQ6YHU6 1953 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 GRPP07492 148 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 IAPPP10997 89 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 PCBD1P61457 104 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 HBG2P69892 147 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 Q6P435 159 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 SSMEM1Q8WWF3 244 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 DKK2Q9UBU2 259 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 LY96Q9Y6Y9 160 aa7.34□□□□□ -1.23
CDH1-205ENST00000562836 H3BMM0 161 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 UPK2O00526 184 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 PEX7O00628 323 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 P0DMU3 169 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 FAM231AP0DMU4 169 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 FAM231CP0DMU5 169 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 SPINT3P49223 89 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 C20orf204Q6ZNR8 217 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 OR5AS1Q8N127 324 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 TMEM52Q8NDY8 209 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 OVCA2Q8WZ82 227 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 SPAG17Q6Q759 2223 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 IGHV1OR15-9A0A0B4J2B8 117 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 PDPNQ86YL7 162 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 MAPKAPK5-AS1Q8N8E1 139 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 MYOZ3Q8TDC0 251 aa7.33□□□□□ -1.24
CDH1-205ENST00000562836 CCL16O15467 120 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 FHL2Q14192 279 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 LINC01590Q5TEZ4 76 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 PRR15Q8IV56 129 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
CDH1-205ENST00000562836 TIMM9Q9Y5J7 89 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 KMT2EQ8IZD2 1858 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 TRBV7-3A0A075B6L6 115 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 TMEM14DPA8MWL7 114 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 CCL8P80075 99 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 ATP5L2Q7Z4Y8 100 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 LYPD6Q86Y78 171 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 MGST2Q99735 147 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 PSENENQ9NZ42 101 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 CABIN1Q9Y6J0 2220 aa7.32□□□□□ -1.24
CDH1-205ENST00000562836 RNASE2P10153 161 aaKnown RBP7.31□□□□□ -1.24
CDH1-205ENST00000562836 RBM3P98179 157 aaKnown RBP7.31□□□□□ -1.24
CDH1-205ENST00000562836 UNQ9165/PRO28630Q6UXU0 137 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 SERP2Q8N6R1 65 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 SYNJ2BPP57105 145 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 S100A7L2Q5SY68 101 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 FAM223AQ8IWN6 122 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 PGLYRP4Q96LB8 373 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 HTTP42858 3142 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 BUB3O43684 328 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 CDAP32320 146 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 RPL18Q07020 188 aaKnown RBP7.31□□□□□ -1.24
CDH1-205ENST00000562836 CLLU1OSQ5K130 101 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 TXNDC17Q9BRA2 123 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 TMEM243Q9BU79 118 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 ZNF355PQ9NSJ1 428 aa7.31□□□□□ -1.24
CDH1-205ENST00000562836 PLAC8L1A1L4L8 177 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 TIMM17BO60830 172 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 PLAUP00749 431 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 BGLAPP02818 100 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 CD164L2Q6UWJ8 174 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 CXCL17Q6UXB2 119 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 KLF16Q9BXK1 252 aaPredicted RBP7.3□□□□□ -1.24
CDH1-205ENST00000562836 MOB4Q9Y3A3 225 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 ZNF137PP52743 207 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 ERCC8Q13216 396 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 SPANXN5Q5MJ07 72 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 ZNF793Q6ZN11 406 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 MARCH3Q86UD3 253 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 C6orf223Q8N319 242 aa7.3□□□□□ -1.24
CDH1-205ENST00000562836 THSD7BQ9C0I4 1608 aa7.29□□□□□ -1.24
CDH1-205ENST00000562836 SS18L1O75177 396 aaPredicted RBP7.29□□□□□ -1.24
CDH1-205ENST00000562836 ARL14EPLP0DKL9 152 aa7.29□□□□□ -1.24
CDH1-205ENST00000562836 CA6P23280 308 aa7.29□□□□□ -1.24
CDH1-205ENST00000562836 FXYD7P58549 80 aa7.29□□□□□ -1.24
CDH1-205ENST00000562836 CCL14Q16627 93 aa7.29□□□□□ -1.24
CDH1-205ENST00000562836 TET1Q8NFU7 2136 aa7.29□□□□□ -1.24
CDH1-205ENST00000562836 MED13Q9UHV7 2174 aa7.29□□□□□ -1.24
CDH1-205ENST00000562836 CXorf51AA0A1B0GTR3 108 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 HIGD1CA8MV81 97 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 RPS18P62269 152 aaKnown RBP7.28□□□□□ -1.24
CDH1-205ENST00000562836 TFF3Q07654 80 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 WFDC5Q8TCV5 224 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 TRGV5A0A0B4J1U4 118 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 USP17L23D6RBM5 183 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 PLXNB1O43157 2135 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 FHL1Q13642 323 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 C5orf38Q86SI9 138 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 WDR86Q86TI4 376 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms