RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 H3BQ15 152 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 PLA2G10O15496 165 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 TCRBP04435 133 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 PVALBP20472 110 aaPredicted RBP10.9□□□□□ -0.66
TPM1-211ENST00000558314 CNPY1Q3B7I2 92 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 GFI1BQ5VTD9 330 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 TMEM263Q8WUH6 116 aaKnown RBP10.9□□□□□ -0.66
TPM1-211ENST00000558314 RNF141Q8WVD5 230 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 DNAJC4Q9NNZ3 241 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 NUDT15Q9NV35 164 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 UQCC1Q9NVA1 299 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 TRAV12-3A0A0B4J271 114 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 GAGE12BA1L429 117 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 GAGE7O76087 117 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 GAGE12FP0CL80 117 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 GAGE12GP0CL81 117 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 GAGE12IP0CL82 117 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 C12orf45Q8N5I9 185 aaPredicted RBP10.89□□□□□ -0.67
TPM1-211ENST00000558314 OR1L4Q8NGR5 311 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 ZNF431Q8TF32 576 aaPredicted RBP10.89□□□□□ -0.67
TPM1-211ENST00000558314 PTTG2Q9NZH5 202 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 PXMP4Q9Y6I8 212 aa10.89□□□□□ -0.67
TPM1-211ENST00000558314 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
TPM1-211ENST00000558314 SNURFLB1AK76 121 aa10.88□□□□□ -0.67
TPM1-211ENST00000558314 RLN2P04090 185 aa10.88□□□□□ -0.67
TPM1-211ENST00000558314 LEPP41159 167 aa10.88□□□□□ -0.67
TPM1-211ENST00000558314 FAM3BP58499 235 aaPredicted RBP10.88□□□□□ -0.67
TPM1-211ENST00000558314 ZNF493Q6ZR52 646 aa10.88□□□□□ -0.67
TPM1-211ENST00000558314 RNASE8Q8TDE3 154 aaKnown RBP10.88□□□□□ -0.67
TPM1-211ENST00000558314 GNPNAT1Q96EK6 184 aaPredicted RBP10.88□□□□□ -0.67
TPM1-211ENST00000558314 C2orf50Q96LR7 162 aa10.88□□□□□ -0.67
TPM1-211ENST00000558314 LINC00588Q9Y4M8 146 aa10.88□□□□□ -0.67
TPM1-211ENST00000558314 TRAV26-1A0A087WT03 109 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 H2AFB2P0C5Z0 115 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 IGLC2P0DOY2 106 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 FGF7P21781 194 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 TNP2Q05952 138 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 SSX7Q7RTT5 188 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 ZNRF2Q8NHG8 242 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 S100ZQ8WXG8 99 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 PCLOQ9Y6V0 5065 aa10.87□□□□□ -0.67
TPM1-211ENST00000558314 IGSF23A1L1A6 192 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 CT45A10P0DMU9 189 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 ERCC8Q13216 396 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 RAB32Q13637 225 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 STX12Q86Y82 276 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 C6orf223Q8N319 242 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 BLNKQ8WV28 456 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 SAT2Q96F10 170 aaPredicted RBP10.86□□□□□ -0.67
TPM1-211ENST00000558314 PFDN5Q99471 154 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 GPN1Q9HCN4 374 aaPredicted RBP10.86□□□□□ -0.67
TPM1-211ENST00000558314 SLC39A9Q9NUM3 307 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 ZNF586Q9NXT0 402 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 WDR83OSQ9Y284 106 aa10.86□□□□□ -0.67
TPM1-211ENST00000558314 FAM240BA0A1B0GVZ2 78 aa10.85□□□□□ -0.67
TPM1-211ENST00000558314 SULT1A1P50225 295 aa10.85□□□□□ -0.67
TPM1-211ENST00000558314 GUK1Q16774 197 aa10.85□□□□□ -0.67
TPM1-211ENST00000558314 C20orf144Q9BQM9 153 aa10.85□□□□□ -0.67
TPM1-211ENST00000558314 TIMM9Q9Y5J7 89 aa10.85□□□□□ -0.67
TPM1-211ENST00000558314 PKHD1P08F94 4074 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 C16orf90A8MZG2 172 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 M0R3E3 92 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 PYYP10082 97 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 M6PRP20645 277 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 S100A11P31949 105 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 HBG1P69891 147 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 HBG2P69892 147 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 TMEM252Q8N6L7 170 aa10.84□□□□□ -0.67
TPM1-211ENST00000558314 LYRM2Q9NU23 88 aaPredicted RBP10.84□□□□□ -0.67
TPM1-211ENST00000558314 NPIPB6E9PJ23 425 aa10.83□□□□□ -0.68
TPM1-211ENST00000558314 HOXA5P20719 270 aa10.83□□□□□ -0.68
TPM1-211ENST00000558314 RPL29P47914 159 aaKnown RBP10.83□□□□□ -0.68
TPM1-211ENST00000558314 Q6ZTI0 123 aa10.83□□□□□ -0.68
TPM1-211ENST00000558314 THAP6Q8TBB0 222 aa10.83□□□□□ -0.68
TPM1-211ENST00000558314 CCDC32Q9BV29 185 aa10.83□□□□□ -0.68
TPM1-211ENST00000558314 TMPRSS5Q9H3S3 457 aa10.83□□□□□ -0.68
TPM1-211ENST00000558314 C11orf1Q9H5F2 150 aa10.83□□□□□ -0.68
TPM1-211ENST00000558314 DNAH11Q96DT5 4516 aa10.83□□□□□ -0.68
TPM1-211ENST00000558314 TRBV19A0A075B6N1 114 aa10.82□□□□□ -0.68
TPM1-211ENST00000558314 TRGV2A0A075B6R0 118 aa10.82□□□□□ -0.68
TPM1-211ENST00000558314 RNASE4P34096 147 aaKnown RBP10.82□□□□□ -0.68
TPM1-211ENST00000558314 BTN1A1Q13410 526 aa10.82□□□□□ -0.68
TPM1-211ENST00000558314 GCSAMLQ5JQS6 135 aa10.82□□□□□ -0.68
TPM1-211ENST00000558314 EXOC3-AS1Q8N2X6 119 aa10.82□□□□□ -0.68
TPM1-211ENST00000558314 Q9H8V8 135 aa10.82□□□□□ -0.68
TPM1-211ENST00000558314 GSN-AS1Q9NRJ2 163 aa10.82□□□□□ -0.68
TPM1-211ENST00000558314 DYNC1H1Q14204 4646 aaKnown RBP10.81□□□□□ -0.68
TPM1-211ENST00000558314 TRGV1A0A0A0MS02 117 aa10.81□□□□□ -0.68
TPM1-211ENST00000558314 C7orf71A4D174 169 aa10.81□□□□□ -0.68
TPM1-211ENST00000558314 SIX6O95475 246 aa10.81□□□□□ -0.68
TPM1-211ENST00000558314 VWC2Q2TAL6 325 aa10.81□□□□□ -0.68
TPM1-211ENST00000558314 MZT2BQ6NZ67 158 aa10.81□□□□□ -0.68
TPM1-211ENST00000558314 FAM122CQ6P4D5 195 aa10.81□□□□□ -0.68
TPM1-211ENST00000558314 RXFP4Q8TDU9 374 aa10.81□□□□□ -0.68
TPM1-211ENST00000558314 PYGO2Q9BRQ0 406 aa10.81□□□□□ -0.68
TPM1-211ENST00000558314 PKD1P98161 4303 aa10.8□□□□□ -0.68
TPM1-211ENST00000558314 IGKV2-40A0A087WW87 121 aaPredicted RBP10.8□□□□□ -0.68
TPM1-211ENST00000558314 IGKV2D-40P01614 121 aaPredicted RBP10.8□□□□□ -0.68
TPM1-211ENST00000558314 SLC25A5P05141 298 aaKnown RBP10.8□□□□□ -0.68
TPM1-211ENST00000558314 HIST1H1EP10412 219 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms