RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 UBE2CO00762 179 aa15.29■□□□□ 0.04
SEC23A-213ENST00000557280 STAG3L2P0CL84 134 aa15.29■□□□□ 0.04
SEC23A-213ENST00000557280 STAG3L3P0CL85 134 aa15.29■□□□□ 0.04
SEC23A-213ENST00000557280 CNN1P51911 297 aaKnown RBP15.29■□□□□ 0.04
SEC23A-213ENST00000557280 FXYD7P58549 80 aa15.29■□□□□ 0.04
SEC23A-213ENST00000557280 SLC35B3Q9H1N7 401 aa15.29■□□□□ 0.04
SEC23A-213ENST00000557280 NBEAL2Q6ZNJ1 2754 aa15.28■□□□□ 0.04
SEC23A-213ENST00000557280 A8MTW9 85 aa15.28■□□□□ 0.04
SEC23A-213ENST00000557280 NKX2-5P52952 324 aaPredicted RBP15.28■□□□□ 0.04
SEC23A-213ENST00000557280 HIST1H1AQ02539 215 aaPredicted RBP15.28■□□□□ 0.04
SEC23A-213ENST00000557280 AKR1C8PQ5T2L2 129 aa15.28■□□□□ 0.04
SEC23A-213ENST00000557280 Q6ZWC4 215 aa15.28■□□□□ 0.04
SEC23A-213ENST00000557280 OR8A1Q8NGG7 326 aa15.28■□□□□ 0.04
SEC23A-213ENST00000557280 ACTR3CQ9C0K3 210 aaPredicted RBP15.28■□□□□ 0.04
SEC23A-213ENST00000557280 CLEC5AQ9NY25 188 aa15.28■□□□□ 0.04
SEC23A-213ENST00000557280 FHITP49789 147 aa15.27■□□□□ 0.04
SEC23A-213ENST00000557280 MORN3Q6PF18 240 aaPredicted RBP15.27■□□□□ 0.04
SEC23A-213ENST00000557280 AMTNQ6UX39 209 aa15.27■□□□□ 0.04
SEC23A-213ENST00000557280 PQLC2Q6ZP29 291 aa15.27■□□□□ 0.04
SEC23A-213ENST00000557280 STOML3Q8TAV4 291 aa15.27■□□□□ 0.04
SEC23A-213ENST00000557280 RNF183Q96D59 192 aa15.27■□□□□ 0.04
SEC23A-213ENST00000557280 TPT1P13693 172 aaKnown RBP15.26■□□□□ 0.03
SEC23A-213ENST00000557280 PSG9Q00887 426 aa15.26■□□□□ 0.03
SEC23A-213ENST00000557280 ICAM4Q14773 271 aa15.26■□□□□ 0.03
SEC23A-213ENST00000557280 BAP18Q8IXM2 172 aa15.26■□□□□ 0.03
SEC23A-213ENST00000557280 TMED6Q8WW62 240 aa15.26■□□□□ 0.03
SEC23A-213ENST00000557280 CLUHP3Q96NS8 147 aa15.26■□□□□ 0.03
SEC23A-213ENST00000557280 SPRY2O43597 315 aa15.25■□□□□ 0.03
SEC23A-213ENST00000557280 SEC11BP0C7V7 166 aa15.25■□□□□ 0.03
SEC23A-213ENST00000557280 GCHFRP30047 84 aa15.25■□□□□ 0.03
SEC23A-213ENST00000557280 RANP62826 216 aaKnown RBP15.25■□□□□ 0.03
SEC23A-213ENST00000557280 CSNK1G2-AS1Q8NCQ2 148 aa15.25■□□□□ 0.03
SEC23A-213ENST00000557280 Q9H3A6 140 aa15.25■□□□□ 0.03
SEC23A-213ENST00000557280 XCL2Q9UBD3 114 aa15.25■□□□□ 0.03
SEC23A-213ENST00000557280 CTXND1A0A1B0GTU2 59 aa15.24■□□□□ 0.03
SEC23A-213ENST00000557280 MRPL53Q96EL3 112 aaKnown RBP15.24■□□□□ 0.03
SEC23A-213ENST00000557280 AAMDCQ9H7C9 122 aa15.24■□□□□ 0.03
SEC23A-213ENST00000557280 TP53TG1Q9Y2A0 90 aa15.24■□□□□ 0.03
SEC23A-213ENST00000557280 DUSP14O95147 198 aaKnown RBP15.23■□□□□ 0.03
SEC23A-213ENST00000557280 FGF8P55075 233 aaPredicted RBP15.23■□□□□ 0.03
SEC23A-213ENST00000557280 IGKV2-40A0A087WW87 121 aaPredicted RBP15.22■□□□□ 0.03
SEC23A-213ENST00000557280 M0R2Z0 102 aa15.22■□□□□ 0.03
SEC23A-213ENST00000557280 CXorf1O96002 111 aa15.22■□□□□ 0.03
SEC23A-213ENST00000557280 IGKV2D-40P01614 121 aaPredicted RBP15.22■□□□□ 0.03
SEC23A-213ENST00000557280 NUTF2P61970 127 aaKnown RBP15.22■□□□□ 0.03
SEC23A-213ENST00000557280 EIF5AP63241 154 aaKnown RBP15.22■□□□□ 0.03
SEC23A-213ENST00000557280 ERCC8Q13216 396 aa15.22■□□□□ 0.03
SEC23A-213ENST00000557280 SPINK13Q1W4C9 94 aa15.22■□□□□ 0.03
SEC23A-213ENST00000557280 SUN5Q8TC36 379 aa15.22■□□□□ 0.03
SEC23A-213ENST00000557280 TMPRSS5Q9H3S3 457 aa15.22■□□□□ 0.03
SEC23A-213ENST00000557280 PRELID1Q9Y255 219 aa15.22■□□□□ 0.03
SEC23A-213ENST00000557280 IQCF2Q8IXL9 164 aa15.21■□□□□ 0.03
SEC23A-213ENST00000557280 FAM213BQ8TBF2 198 aa15.21■□□□□ 0.03
SEC23A-213ENST00000557280 STAB2Q8WWQ8 2551 aa15.21■□□□□ 0.02
SEC23A-213ENST00000557280 MAP1LC3B2A6NCE7 125 aa15.2■□□□□ 0.02
SEC23A-213ENST00000557280 NPIPB6E9PJ23 425 aa15.2■□□□□ 0.02
SEC23A-213ENST00000557280 BOLA2-SMG1P6H3BVE0 249 aa15.2■□□□□ 0.02
SEC23A-213ENST00000557280 SLC51BQ86UW2 128 aa15.2■□□□□ 0.02
SEC23A-213ENST00000557280 LYPD1Q8N2G4 141 aa15.2■□□□□ 0.02
SEC23A-213ENST00000557280 OR10J6PQ8NGY7 276 aa15.2■□□□□ 0.02
SEC23A-213ENST00000557280 MAP1LC3BQ9GZQ8 125 aa15.2■□□□□ 0.02
SEC23A-213ENST00000557280 BOLA1Q9Y3E2 137 aa15.2■□□□□ 0.02
SEC23A-213ENST00000557280 TRAV12-2A0A075B6T6 113 aa15.19■□□□□ 0.02
SEC23A-213ENST00000557280 CRXO43186 299 aaPredicted RBP15.19■□□□□ 0.02
SEC23A-213ENST00000557280 CT45A10P0DMU9 189 aa15.19■□□□□ 0.02
SEC23A-213ENST00000557280 OR11H2Q8NH07 326 aa15.19■□□□□ 0.02
SEC23A-213ENST00000557280 EDA2RQ9HAV5 297 aa15.19■□□□□ 0.02
SEC23A-213ENST00000557280 OTORQ9NRC9 128 aa15.19■□□□□ 0.02
SEC23A-213ENST00000557280 PGPA6NDG6 321 aa15.18■□□□□ 0.02
SEC23A-213ENST00000557280 UMAD1C9J7I0 102 aa15.18■□□□□ 0.02
SEC23A-213ENST00000557280 KIR3DS1Q14943 382 aa15.18■□□□□ 0.02
SEC23A-213ENST00000557280 RARRES2Q99969 163 aa15.18■□□□□ 0.02
SEC23A-213ENST00000557280 VGLL1Q99990 258 aa15.18■□□□□ 0.02
SEC23A-213ENST00000557280 C1QTNF4Q9BXJ3 329 aa15.18■□□□□ 0.02
SEC23A-213ENST00000557280 X6R8D5 127 aa15.18■□□□□ 0.02
SEC23A-213ENST00000557280 GGTLC3B5MD39 225 aa15.17■□□□□ 0.02
SEC23A-213ENST00000557280 RBMY1A1P0DJD3 496 aaKnown RBP15.17■□□□□ 0.02
SEC23A-213ENST00000557280 RBMY1CP0DJD4 496 aa15.17■□□□□ 0.02
SEC23A-213ENST00000557280 GNG5P63218 68 aa15.17■□□□□ 0.02
SEC23A-213ENST00000557280 RBMY1FQ15415 496 aaKnown RBP15.17■□□□□ 0.02
SEC23A-213ENST00000557280 AGPAT4-IT1Q9H0P7 198 aa15.17■□□□□ 0.02
SEC23A-213ENST00000557280 TMEM167BQ9NRX6 74 aa15.17■□□□□ 0.02
SEC23A-213ENST00000557280 RPH3ALQ9UNE2 315 aa15.17■□□□□ 0.02
SEC23A-213ENST00000557280 YTHDF2Q9Y5A9 579 aaKnown RBP15.17■□□□□ 0.02
SEC23A-213ENST00000557280 A0A1B0GV50 99 aa15.16■□□□□ 0.02
SEC23A-213ENST00000557280 ZNF705EA8MWA4 302 aaPredicted RBP15.16■□□□□ 0.02
SEC23A-213ENST00000557280 FAM74A1Q5RGS3 127 aa15.16■□□□□ 0.02
SEC23A-213ENST00000557280 C1orf158Q8N1D5 194 aa15.16■□□□□ 0.02
SEC23A-213ENST00000557280 PPP1R14DQ9NXH3 145 aa15.16■□□□□ 0.02
SEC23A-213ENST00000557280 A0A0J9YWU9 116 aa15.15■□□□□ 0.02
SEC23A-213ENST00000557280 DIRC3C9JPN6 131 aa15.15■□□□□ 0.02
SEC23A-213ENST00000557280 UBE2G2P60604 165 aa15.15■□□□□ 0.02
SEC23A-213ENST00000557280 DPPA3Q6W0C5 159 aa15.15■□□□□ 0.02
SEC23A-213ENST00000557280 ZNF705AQ6ZN79 300 aaPredicted RBP15.15■□□□□ 0.02
SEC23A-213ENST00000557280 Q8TAT8 98 aa15.15■□□□□ 0.02
SEC23A-213ENST00000557280 IGF2BP2-AS1Q96M15 143 aa15.15■□□□□ 0.02
SEC23A-213ENST00000557280 IGHV3OR16-12A0A075B7B8 117 aa15.14■□□□□ 0.01
SEC23A-213ENST00000557280 DEFB4AO15263 64 aa15.14■□□□□ 0.01
SEC23A-213ENST00000557280 CSN1S1P47710 185 aa15.14■□□□□ 0.01
SEC23A-213ENST00000557280 C9orf47Q6ZRZ4 202 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms