RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PCLOQ9Y6V0 5065 aa15.86■□□□□ 0.13
ACTN1-220ENST00000556433 PVALBP20472 110 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-220ENST00000556433 OR1L4Q8NGR5 311 aa15.85■□□□□ 0.13
ACTN1-220ENST00000556433 RNASE8Q8TDE3 154 aaKnown RBP15.85■□□□□ 0.13
ACTN1-220ENST00000556433 TMEM263Q8WUH6 116 aaKnown RBP15.85■□□□□ 0.13
ACTN1-220ENST00000556433 SAT2Q96F10 170 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-220ENST00000556433 C20orf144Q9BQM9 153 aa15.85■□□□□ 0.13
ACTN1-220ENST00000556433 C11orf1Q9H5F2 150 aa15.85■□□□□ 0.13
ACTN1-220ENST00000556433 WDR83OSQ9Y284 106 aa15.85■□□□□ 0.13
ACTN1-220ENST00000556433 DNAH11Q96DT5 4516 aa15.85■□□□□ 0.13
ACTN1-220ENST00000556433 DYNC1H1Q14204 4646 aaKnown RBP15.85■□□□□ 0.13
ACTN1-220ENST00000556433 PKHD1P08F94 4074 aa15.84■□□□□ 0.13
ACTN1-220ENST00000556433 NDUFA13Q9P0J0 144 aa15.84■□□□□ 0.13
ACTN1-220ENST00000556433 H2AFB2P0C5Z0 115 aa15.83■□□□□ 0.12
ACTN1-220ENST00000556433 S100A10P60903 97 aa15.83■□□□□ 0.12
ACTN1-220ENST00000556433 GUK1Q16774 197 aa15.83■□□□□ 0.12
ACTN1-220ENST00000556433 GFI1BQ5VTD9 330 aa15.83■□□□□ 0.12
ACTN1-220ENST00000556433 CCDC28AQ8IWP9 274 aa15.83■□□□□ 0.12
ACTN1-220ENST00000556433 S100A11P31949 105 aa15.82■□□□□ 0.12
ACTN1-220ENST00000556433 CCL18P55774 89 aa15.82■□□□□ 0.12
ACTN1-220ENST00000556433 VWC2Q2TAL6 325 aa15.82■□□□□ 0.12
ACTN1-220ENST00000556433 PFDN5Q99471 154 aa15.82■□□□□ 0.12
ACTN1-220ENST00000556433 SLC39A9Q9NUM3 307 aa15.82■□□□□ 0.12
ACTN1-220ENST00000556433 PKD1P98161 4303 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 J3KRW8 73 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 CT45A10P0DMU9 189 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 RPL29P47914 159 aaKnown RBP15.81■□□□□ 0.12
ACTN1-220ENST00000556433 SULT1A1P50225 295 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 BAXQ07812 192 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 TMEM252Q8N6L7 170 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 ZNRF2Q8NHG8 242 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 RNF141Q8WVD5 230 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 LYRM2Q9NU23 88 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-220ENST00000556433 ZNF586Q9NXT0 402 aa15.81■□□□□ 0.12
ACTN1-220ENST00000556433 UBE2L5PA0A1B0GUS4 154 aa15.8■□□□□ 0.12
ACTN1-220ENST00000556433 IGSF23A1L1A6 192 aa15.8■□□□□ 0.12
ACTN1-220ENST00000556433 LEPP41159 167 aa15.8■□□□□ 0.12
ACTN1-220ENST00000556433 IL15RAQ13261 267 aa15.8■□□□□ 0.12
ACTN1-220ENST00000556433 OR5I1Q13606 314 aa15.8■□□□□ 0.12
ACTN1-220ENST00000556433 RAB32Q13637 225 aa15.8■□□□□ 0.12
ACTN1-220ENST00000556433 NBDYA0A0U1RRE5 68 aa15.79■□□□□ 0.12
ACTN1-220ENST00000556433 FAM240BA0A1B0GVZ2 78 aa15.79■□□□□ 0.12
ACTN1-220ENST00000556433 HBG1P69891 147 aa15.79■□□□□ 0.12
ACTN1-220ENST00000556433 HBG2P69892 147 aa15.79■□□□□ 0.12
ACTN1-220ENST00000556433 CLINT1Q14677 625 aa15.79■□□□□ 0.12
ACTN1-220ENST00000556433 STX12Q86Y82 276 aa15.79■□□□□ 0.12
ACTN1-220ENST00000556433 CCDC32Q9BV29 185 aa15.79■□□□□ 0.12
ACTN1-220ENST00000556433 LINC00588Q9Y4M8 146 aa15.79■□□□□ 0.12
ACTN1-220ENST00000556433 TRAV12-3A0A0B4J271 114 aa15.78■□□□□ 0.12
ACTN1-220ENST00000556433 NPIPB6E9PJ23 425 aa15.78■□□□□ 0.12
ACTN1-220ENST00000556433 ODF3Q96PU9 254 aa15.78■□□□□ 0.12
ACTN1-220ENST00000556433 GAGE12BA1L429 117 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 SNURFLB1AK76 121 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 ZNF253O75346 499 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 GAGE7O76087 117 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 RLN2P04090 185 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 GAGE12FP0CL80 117 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 GAGE12GP0CL81 117 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 GAGE12IP0CL82 117 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 FGF7P21781 194 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 ATP6V1FQ16864 119 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 LINC00612Q8N6U2 182 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 CHAC2Q8WUX2 184 aa15.77■□□□□ 0.12
ACTN1-220ENST00000556433 TRBV19A0A075B6N1 114 aa15.76■□□□□ 0.11
ACTN1-220ENST00000556433 SSX7Q7RTT5 188 aa15.76■□□□□ 0.11
ACTN1-220ENST00000556433 ZNF575Q86XF7 245 aa15.76■□□□□ 0.11
ACTN1-220ENST00000556433 GNPNAT1Q96EK6 184 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-220ENST00000556433 GPN1Q9HCN4 374 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-220ENST00000556433 TRAV26-1A0A087WT03 109 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 M0R3E3 92 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 HIST1H1EP10412 219 aaKnown RBP15.75■□□□□ 0.11
ACTN1-220ENST00000556433 M6PRP20645 277 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 ERCC8Q13216 396 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 MZT2BQ6NZ67 158 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 C6orf223Q8N319 242 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 MRPL53Q96EL3 112 aaKnown RBP15.75■□□□□ 0.11
ACTN1-220ENST00000556433 PYGO2Q9BRQ0 406 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 TMEM14CQ9P0S9 112 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 TIMM9Q9Y5J7 89 aa15.75■□□□□ 0.11
ACTN1-220ENST00000556433 A0A0J9YY99 117 aa15.74■□□□□ 0.11
ACTN1-220ENST00000556433 TNP2Q05952 138 aa15.74■□□□□ 0.11
ACTN1-220ENST00000556433 MPDU1O75352 247 aa15.73■□□□□ 0.11
ACTN1-220ENST00000556433 NDUFB4O95168 129 aa15.73■□□□□ 0.11
ACTN1-220ENST00000556433 SLC25A5P05141 298 aaKnown RBP15.73■□□□□ 0.11
ACTN1-220ENST00000556433 PYYP10082 97 aa15.73■□□□□ 0.11
ACTN1-220ENST00000556433 HOXA5P20719 270 aa15.73■□□□□ 0.11
ACTN1-220ENST00000556433 RXFP4Q8TDU9 374 aa15.73■□□□□ 0.11
ACTN1-220ENST00000556433 PRELID1Q9Y255 219 aa15.73■□□□□ 0.11
ACTN1-220ENST00000556433 MUC4Q99102 2169 aa15.73■□□□□ 0.11
ACTN1-220ENST00000556433 DAZ2Q13117 558 aaKnown RBP15.72■□□□□ 0.11
ACTN1-220ENST00000556433 GCSAMLQ5JQS6 135 aa15.72■□□□□ 0.11
ACTN1-220ENST00000556433 BLNKQ8WV28 456 aa15.72■□□□□ 0.11
ACTN1-220ENST00000556433 ZNF503Q96F45 646 aa15.72■□□□□ 0.11
ACTN1-220ENST00000556433 LINC00477Q96M19 166 aa15.72■□□□□ 0.11
ACTN1-220ENST00000556433 NPCDR1Q9BY65 106 aa15.72■□□□□ 0.11
ACTN1-220ENST00000556433 C7orf71A4D174 169 aa15.71■□□□□ 0.11
ACTN1-220ENST00000556433 NHLH2Q02577 135 aa15.71■□□□□ 0.11
ACTN1-220ENST00000556433 PDE6HQ13956 83 aa15.71■□□□□ 0.11
ACTN1-220ENST00000556433 EXOC3-AS1Q8N2X6 119 aa15.71■□□□□ 0.11
ACTN1-220ENST00000556433 AGPAT4-IT1Q9H0P7 198 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms