RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SZT2Q5T011 3432 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 OBSL1O75147 1896 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 MUC3AQ02505 3323 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 C5orf42Q9H799 3197 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 CEP250Q9BV73 2442 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 LAMA1P25391 3075 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 CEP290O15078 2479 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 CFAP47Q6ZTR5 3102 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 TRAV27A0A087WT01 109 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 M0R233 179 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 OR10J4P0C629 311 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 CDK6Q00534 326 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 FADDQ13158 208 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 TAF1AQ15573 450 aaPredicted RBP0.08□□□□□ -2.4
SCFD1-214ENST00000554819 EIF5AL1Q6IS14 154 aaKnown RBP0.08□□□□□ -2.4
SCFD1-214ENST00000554819 ARPINQ7Z6K5 226 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 OR5D16Q8NGK9 328 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 PPTC7Q8NI37 304 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 RAB37Q96AX2 223 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 GGACTQ9BVM4 153 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 NPCDR1Q9BY65 106 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 ENY2Q9NPA8 101 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 OPTCQ9UBM4 332 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 HSPB8Q9UJY1 196 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 OR52A1Q9UKL2 312 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 FAM32AQ9Y421 112 aaKnown RBP0.08□□□□□ -2.4
SCFD1-214ENST00000554819 LRBAP50851 2863 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 SRRM2Q9UQ35 2752 aaKnown RBP0.08□□□□□ -2.4
SCFD1-214ENST00000554819 CRYBG3Q68DQ2 2970 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 NF1P21359 2839 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 NIPBLQ6KC79 2804 aaeCLIP0.08□□□□□ -2.4
SCFD1-214ENST00000554819 FAM186AA6NE01 2351 aa0.08□□□□□ -2.4
SCFD1-214ENST00000554819 MYH7BA7E2Y1 1941 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 MIA2Q96PC5 1412 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 ERBINQ96RT1 1412 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 ADGRL3Q9HAR2 1447 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 HRNRQ86YZ3 2850 aaPredicted RBP0.07□□□□□ -2.4
SCFD1-214ENST00000554819 TRPM1Q7Z4N2 1603 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 JMJD7-PLA2G4BH0Y9G9 81 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 HMGB3O15347 200 aaKnown RBP0.07□□□□□ -2.4
SCFD1-214ENST00000554819 SERPINA1P01009 418 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 IFNA6P05013 189 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 CRHP06850 196 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 KDELR1P24390 212 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 RAB5CP51148 216 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 SPATA45Q537H7 98 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 TMEM14EPQ6UXP3 125 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 HYLS1Q96M11 299 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 C9orf16Q9BUW7 83 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 POPDC3Q9HBV1 291 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 ARMC1Q9NVT9 282 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 JPT1Q9UK76 154 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 ARL2BPQ9Y2Y0 163 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 ARL5AQ9Y689 179 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 NCAPD3P42695 1498 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 CEP164Q9UPV0 1460 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 EYSQ5T1H1 3165 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 NISCHQ9Y2I1 1504 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 TACC2O95359 2948 aa0.07□□□□□ -2.4
SCFD1-214ENST00000554819 RANBP2P49792 3224 aaKnown RBP0.06□□□□□ -2.4
SCFD1-214ENST00000554819 TNCP24821 2201 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 KIF1BO60333 1816 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 BCL9O00512 1426 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 PCNX1Q96RV3 2341 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 DUXBA0A1W2PPF3 345 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 CST8O60676 142 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 PPYP01298 95 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 NFYBP25208 207 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 ZNF137PP52743 207 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 FXYD6P3P58550 94 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 NCALDP61601 193 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 VBP1P61758 197 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 REEP5Q00765 189 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 MNS1Q8NEH6 495 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 CHCHD1Q96BP2 118 aaKnown RBP0.06□□□□□ -2.4
SCFD1-214ENST00000554819 WFDC10AQ9H1F0 79 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 PYCARDQ9ULZ3 195 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 ASB4Q9Y574 426 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 DMXL2Q8TDJ6 3036 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 ZFHX3Q15911 3703 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 KNTC1P50748 2209 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 FRMPD1Q5SYB0 1578 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 FREM2Q5SZK8 3169 aa0.06□□□□□ -2.4
SCFD1-214ENST00000554819 CAMSAP1Q5T5Y3 1602 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 FREM3P0C091 2139 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 CNOT1A5YKK6 2376 aaKnown RBP0.05□□□□□ -2.4
SCFD1-214ENST00000554819 TRAV5A0A0B4J249 113 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 TRBV30A0A0K0K1B3 111 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 TMEM210A6NLX4 147 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 NDUFC2O95298 119 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 IGHV3-33P01772 117 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 CCL4P13236 92 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 HSD11B1P28845 292 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 INSL3P51460 131 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 FAM103A1Q9BTL3 118 aaKnown RBP0.05□□□□□ -2.4
SCFD1-214ENST00000554819 TCEAL2Q9H3H9 227 aaPredicted RBP0.05□□□□□ -2.4
SCFD1-214ENST00000554819 CACYBPQ9HB71 228 aaKnown RBP0.05□□□□□ -2.4
SCFD1-214ENST00000554819 PRNDQ9UKY0 176 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 STARD9Q9P2P6 4700 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 WNK1Q9H4A3 2382 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms