RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TRGV2A0A075B6R0 118 aa16.64■□□□□ 0.25
FOXA1-204ENST00000554607 A0A096LPF7 62 aa16.64■□□□□ 0.25
FOXA1-204ENST00000554607 TRAV12-3A0A0B4J271 114 aa16.64■□□□□ 0.25
FOXA1-204ENST00000554607 C9orf170A2RU37 121 aa16.64■□□□□ 0.25
FOXA1-204ENST00000554607 COX7A2P2O60397 106 aa16.64■□□□□ 0.25
FOXA1-204ENST00000554607 Q6ZRN7 208 aaPredicted RBP16.64■□□□□ 0.25
FOXA1-204ENST00000554607 Q6ZTI0 123 aa16.64■□□□□ 0.25
FOXA1-204ENST00000554607 VSIG2Q96IQ7 327 aa16.64■□□□□ 0.25
FOXA1-204ENST00000554607 C18orf15Q96N68 181 aa16.64■□□□□ 0.25
FOXA1-204ENST00000554607 J3KRW8 73 aa16.63■□□□□ 0.25
FOXA1-204ENST00000554607 AGPAT2O15120 278 aa16.63■□□□□ 0.25
FOXA1-204ENST00000554607 SIVA1O15304 175 aa16.63■□□□□ 0.25
FOXA1-204ENST00000554607 INAFM2P0DMQ5 153 aa16.63■□□□□ 0.25
FOXA1-204ENST00000554607 TAS2R30P59541 319 aa16.63■□□□□ 0.25
FOXA1-204ENST00000554607 CDPF1Q6NVV7 123 aa16.63■□□□□ 0.25
FOXA1-204ENST00000554607 GGACTQ9BVM4 153 aa16.63■□□□□ 0.25
FOXA1-204ENST00000554607 SLC17A3O00476 420 aa16.62■□□□□ 0.25
FOXA1-204ENST00000554607 TSC22D2O75157 780 aa16.62■□□□□ 0.25
FOXA1-204ENST00000554607 CT45A10P0DMU9 189 aa16.62■□□□□ 0.25
FOXA1-204ENST00000554607 ZNF680Q8NEM1 530 aa16.62■□□□□ 0.25
FOXA1-204ENST00000554607 ZNF431Q8TF32 576 aaPredicted RBP16.62■□□□□ 0.25
FOXA1-204ENST00000554607 H3BTX0 84 aa16.61■□□□□ 0.25
FOXA1-204ENST00000554607 IGLC2P0DOY2 106 aa16.61■□□□□ 0.25
FOXA1-204ENST00000554607 ERVFC1-1P60608 527 aa16.61■□□□□ 0.25
FOXA1-204ENST00000554607 GUK1Q16774 197 aa16.61■□□□□ 0.25
FOXA1-204ENST00000554607 C10orf113Q5VZT2 155 aa16.61■□□□□ 0.25
FOXA1-204ENST00000554607 LYPD1Q8N2G4 141 aa16.61■□□□□ 0.25
FOXA1-204ENST00000554607 ZBTB8BQ8NAP8 495 aaPredicted RBP16.61■□□□□ 0.25
FOXA1-204ENST00000554607 TMEM37Q8WXS4 190 aa16.61■□□□□ 0.25
FOXA1-204ENST00000554607 SAT2Q96F10 170 aaPredicted RBP16.61■□□□□ 0.25
FOXA1-204ENST00000554607 NPIPB6E9PJ23 425 aa16.6■□□□□ 0.25
FOXA1-204ENST00000554607 H3BMQ9 156 aa16.6■□□□□ 0.25
FOXA1-204ENST00000554607 V9GYH0 126 aa16.6■□□□□ 0.25
FOXA1-204ENST00000554607 SCGB1D2O95969 90 aa16.59■□□□□ 0.25
FOXA1-204ENST00000554607 SLC25A5P05141 298 aaKnown RBP16.59■□□□□ 0.25
FOXA1-204ENST00000554607 OPCMLQ14982 345 aa16.59■□□□□ 0.25
FOXA1-204ENST00000554607 DNAJC4Q9NNZ3 241 aa16.59■□□□□ 0.25
FOXA1-204ENST00000554607 DMBT1Q9UGM3 2413 aaPredicted RBP16.59■□□□□ 0.25
FOXA1-204ENST00000554607 LINC00854A0A1B0GVQ3 168 aa16.58■□□□□ 0.24
FOXA1-204ENST00000554607 H3BQ15 152 aa16.58■□□□□ 0.24
FOXA1-204ENST00000554607 Q6ZRG5 221 aa16.58■□□□□ 0.24
FOXA1-204ENST00000554607 NFE4Q86UQ8 179 aa16.58■□□□□ 0.24
FOXA1-204ENST00000554607 GSN-AS1Q9NRJ2 163 aa16.58■□□□□ 0.24
FOXA1-204ENST00000554607 FUT9Q9Y231 359 aa16.58■□□□□ 0.24
FOXA1-204ENST00000554607 TRGV1A0A0A0MS02 117 aa16.57■□□□□ 0.24
FOXA1-204ENST00000554607 NXPH4O95158 308 aa16.57■□□□□ 0.24
FOXA1-204ENST00000554607 S100A5P33763 92 aa16.57■□□□□ 0.24
FOXA1-204ENST00000554607 RAB31Q13636 194 aa16.57■□□□□ 0.24
FOXA1-204ENST00000554607 IAH1Q2TAA2 248 aaPredicted RBP16.57■□□□□ 0.24
FOXA1-204ENST00000554607 MORN5Q5VZ52 161 aa16.57■□□□□ 0.24
FOXA1-204ENST00000554607 MGST2Q99735 147 aa16.57■□□□□ 0.24
FOXA1-204ENST00000554607 LINC00467Q9BRT7 94 aa16.57■□□□□ 0.24
FOXA1-204ENST00000554607 ICOSQ9Y6W8 199 aa16.57■□□□□ 0.24
FOXA1-204ENST00000554607 C7orf71A4D174 169 aa16.56■□□□□ 0.24
FOXA1-204ENST00000554607 OR4E1P0C645 316 aa16.56■□□□□ 0.24
FOXA1-204ENST00000554607 XGP55808 180 aa16.56■□□□□ 0.24
FOXA1-204ENST00000554607 ARL16Q0P5N6 197 aa16.56■□□□□ 0.24
FOXA1-204ENST00000554607 C11orf72Q8NBR9 251 aa16.56■□□□□ 0.24
FOXA1-204ENST00000554607 FRZBQ92765 325 aa16.56■□□□□ 0.24
FOXA1-204ENST00000554607 NAP1L6A6NFF2 107 aa16.55■□□□□ 0.24
FOXA1-204ENST00000554607 PAX4O43316 350 aa16.55■□□□□ 0.24
FOXA1-204ENST00000554607 ZNF253O75346 499 aa16.55■□□□□ 0.24
FOXA1-204ENST00000554607 ZNF324O75467 553 aaPredicted RBP16.55■□□□□ 0.24
FOXA1-204ENST00000554607 NDUFB6O95139 128 aa16.55■□□□□ 0.24
FOXA1-204ENST00000554607 IFNA5P01569 189 aa16.55■□□□□ 0.24
FOXA1-204ENST00000554607 ANXA2RQ3ZCQ2 193 aa16.55■□□□□ 0.24
FOXA1-204ENST00000554607 EIF4E3Q8N5X7 224 aaKnown RBP16.55■□□□□ 0.24
FOXA1-204ENST00000554607 OR1L4Q8NGR5 311 aa16.55■□□□□ 0.24
FOXA1-204ENST00000554607 MRPL53Q96EL3 112 aaKnown RBP16.55■□□□□ 0.24
FOXA1-204ENST00000554607 GSKIPQ9P0R6 139 aa16.55■□□□□ 0.24
FOXA1-204ENST00000554607 CAMLGP49069 296 aa16.54■□□□□ 0.24
FOXA1-204ENST00000554607 RCL1Q9Y2P8 373 aaKnown RBP16.54■□□□□ 0.24
FOXA1-204ENST00000554607 FAT1Q14517 4588 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 TRAV9-2A0A087WT02 112 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 SPINK4O60575 86 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 INPP1P49441 399 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 SLAQ13239 276 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 Q5VSD8 79 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 LINC00477Q96M19 166 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 PFDN5Q99471 154 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 FLVCR2Q9UPI3 526 aa16.53■□□□□ 0.24
FOXA1-204ENST00000554607 TRAV5A0A0B4J249 113 aa16.52■□□□□ 0.24
FOXA1-204ENST00000554607 C7orf66A4D0T2 115 aa16.52■□□□□ 0.24
FOXA1-204ENST00000554607 KLLNB2CW77 178 aa16.52■□□□□ 0.24
FOXA1-204ENST00000554607 FUSP35637 526 aaKnown RBP eCLIP16.52■□□□□ 0.24
FOXA1-204ENST00000554607 C12orf45Q8N5I9 185 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-204ENST00000554607 ST6GAL2Q96JF0 529 aa16.52■□□□□ 0.24
FOXA1-204ENST00000554607 PRO0255Q9UI72 69 aa16.52■□□□□ 0.24
FOXA1-204ENST00000554607 PRELID1Q9Y255 219 aa16.52■□□□□ 0.24
FOXA1-204ENST00000554607 L7N2F9 121 aa16.51■□□□□ 0.23
FOXA1-204ENST00000554607 TCL1AP56279 114 aa16.51■□□□□ 0.23
FOXA1-204ENST00000554607 VAMP2P63027 116 aa16.51■□□□□ 0.23
FOXA1-204ENST00000554607 NRARPQ7Z6K4 114 aa16.51■□□□□ 0.23
FOXA1-204ENST00000554607 KLF12Q9Y4X4 402 aa16.51■□□□□ 0.23
FOXA1-204ENST00000554607 VPS13BQ7Z7G8 4022 aa16.5■□□□□ 0.23
FOXA1-204ENST00000554607 A0A087WTM6 91 aa16.5■□□□□ 0.23
FOXA1-204ENST00000554607 MPDU1O75352 247 aa16.5■□□□□ 0.23
FOXA1-204ENST00000554607 MBPP02686 304 aaPredicted RBP16.5■□□□□ 0.23
FOXA1-204ENST00000554607 ERCC8Q13216 396 aa16.5■□□□□ 0.23
FOXA1-204ENST00000554607 MRPL23Q16540 153 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms