RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 PSMG4Q5JS54 123 aa8.97□□□□□ -0.97
HDAC7-226ENST00000547259 IGFL4Q6B9Z1 124 aa8.97□□□□□ -0.97
HDAC7-226ENST00000547259 ZNF767PQ75MW2 155 aa8.97□□□□□ -0.97
HDAC7-226ENST00000547259 RNF182Q8N6D2 247 aa8.97□□□□□ -0.97
HDAC7-226ENST00000547259 LINC00052Q96N35 136 aa8.97□□□□□ -0.97
HDAC7-226ENST00000547259 AAMDCQ9H7C9 122 aa8.97□□□□□ -0.97
HDAC7-226ENST00000547259 MAP6D1Q9H9H5 199 aa8.97□□□□□ -0.97
HDAC7-226ENST00000547259 ZNF331Q9NQX6 463 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-226ENST00000547259 TRAV8-2A0A0B4J237 113 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 TRAV1-1A0A0B4J248 108 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 NDUFB4O95168 129 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 PPT1P50897 306 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 UBE2G2P60604 165 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 RANP62826 216 aaKnown RBP8.96□□□□□ -0.98
HDAC7-226ENST00000547259 IFITM2Q01629 132 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 HAGHQ16775 308 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 SUN5Q8TC36 379 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 PCNPQ8WW12 178 aaKnown RBP8.96□□□□□ -0.98
HDAC7-226ENST00000547259 Q9H3A6 140 aa8.96□□□□□ -0.98
HDAC7-226ENST00000547259 STARD9Q9P2P6 4700 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 OR11H12B2RN74 326 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 CD7P09564 240 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 HLA-DMBP28068 263 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 CMC4P56277 68 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-226ENST00000547259 DEFB131AP59861 70 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 RAB14P61106 215 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 ICAM4Q14773 271 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 ODF3L2Q3SX64 289 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 LYPD1Q8N2G4 141 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 EXOC3-AS1Q8N2X6 119 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 ZNF738Q8NE65 137 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 C20orf173Q96LM9 149 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 CLEC5AQ9NY25 188 aa8.95□□□□□ -0.98
HDAC7-226ENST00000547259 IFNA1P01562 189 aa8.94□□□□□ -0.98
HDAC7-226ENST00000547259 CCL20P78556 96 aa8.94□□□□□ -0.98
HDAC7-226ENST00000547259 PSG3Q16557 428 aa8.94□□□□□ -0.98
HDAC7-226ENST00000547259 MANBALQ9NQG1 85 aa8.94□□□□□ -0.98
HDAC7-226ENST00000547259 OTORQ9NRC9 128 aa8.94□□□□□ -0.98
HDAC7-226ENST00000547259 GNG13Q9P2W3 67 aa8.94□□□□□ -0.98
HDAC7-226ENST00000547259 PRELID1Q9Y255 219 aa8.94□□□□□ -0.98
HDAC7-226ENST00000547259 YTHDF2Q9Y5A9 579 aaKnown RBP8.94□□□□□ -0.98
HDAC7-226ENST00000547259 A0A1W2PRE2 83 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 FAM74A7A6NL05 159 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 M0R3E3 92 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 PAGE4O60829 102 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 NMBP08949 121 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 CST9LP1Q5W188 147 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 APRG1Q8IVJ8 170 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 CMTM2Q8TAZ6 248 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 FAM110AQ9BQ89 295 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 WFDC10AQ9H1F0 79 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 RPH3ALQ9UNE2 315 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 ARL2-SNX15V9GYD0 113 aa8.93□□□□□ -0.98
HDAC7-226ENST00000547259 BIRC6Q9NR09 4857 aa8.92□□□□□ -0.98
HDAC7-226ENST00000547259 PGPA6NDG6 321 aa8.92□□□□□ -0.98
HDAC7-226ENST00000547259 ZNF705FA8MVS1 300 aaPredicted RBP8.92□□□□□ -0.98
HDAC7-226ENST00000547259 GGTLC3B5MD39 225 aa8.92□□□□□ -0.98
HDAC7-226ENST00000547259 SLC25A5P05141 298 aaKnown RBP8.92□□□□□ -0.98
HDAC7-226ENST00000547259 PRB4P10163 310 aaPredicted RBP8.92□□□□□ -0.98
HDAC7-226ENST00000547259 CSN1S1P47710 185 aa8.92□□□□□ -0.98
HDAC7-226ENST00000547259 ZNF124Q15973 351 aa8.92□□□□□ -0.98
HDAC7-226ENST00000547259 LYPD6BQ8NI32 183 aa8.92□□□□□ -0.98
HDAC7-226ENST00000547259 RPUSD4Q96CM3 377 aaKnown RBP8.92□□□□□ -0.98
HDAC7-226ENST00000547259 MRPL53Q96EL3 112 aaKnown RBP8.92□□□□□ -0.98
HDAC7-226ENST00000547259 NKX6-2Q9C056 277 aaPredicted RBP8.92□□□□□ -0.98
HDAC7-226ENST00000547259 EPPK1P58107 5090 aaKnown RBP8.91□□□□□ -0.98
HDAC7-226ENST00000547259 ATP5G3P48201 142 aa8.91□□□□□ -0.98
HDAC7-226ENST00000547259 DEFB1P60022 68 aa8.91□□□□□ -0.98
HDAC7-226ENST00000547259 SUMO1P63165 101 aaKnown RBP8.91□□□□□ -0.98
HDAC7-226ENST00000547259 ACTL10Q5JWF8 245 aa8.91□□□□□ -0.98
HDAC7-226ENST00000547259 EBLN2Q6P2I7 272 aa8.91□□□□□ -0.98
HDAC7-226ENST00000547259 FOXI2Q6ZQN5 318 aa8.91□□□□□ -0.98
HDAC7-226ENST00000547259 DEFB125Q8N687 156 aa8.91□□□□□ -0.98
HDAC7-226ENST00000547259 C5orf17Q8NAS9 161 aa8.91□□□□□ -0.98
HDAC7-226ENST00000547259 RXFP4Q8TDU9 374 aa8.91□□□□□ -0.98
HDAC7-226ENST00000547259 KNCNA6PVL3 124 aa8.9□□□□□ -0.98
HDAC7-226ENST00000547259 C11orf94C9JXX5 98 aa8.9□□□□□ -0.98
HDAC7-226ENST00000547259 F6UB75 175 aa8.9□□□□□ -0.98
HDAC7-226ENST00000547259 RGS13O14921 159 aa8.9□□□□□ -0.98
HDAC7-226ENST00000547259 BCL2P10415 239 aa8.9□□□□□ -0.98
HDAC7-226ENST00000547259 TAGLN2P37802 199 aaKnown RBP8.9□□□□□ -0.98
HDAC7-226ENST00000547259 GNG5P63218 68 aa8.9□□□□□ -0.98
HDAC7-226ENST00000547259 HIST1H1AQ02539 215 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-226ENST00000547259 CLLU1Q5K131 121 aa8.9□□□□□ -0.98
HDAC7-226ENST00000547259 SAV1Q9H4B6 383 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-226ENST00000547259 SRD5A3Q9H8P0 318 aa8.9□□□□□ -0.98
HDAC7-226ENST00000547259 A0A0J9YX75 114 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 LOC102723971A0A1B0GUV8 181 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 DIRC3C9JPN6 131 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 DUSP14O95147 198 aaKnown RBP8.89□□□□□ -0.99
HDAC7-226ENST00000547259 ZNF705DP0CH99 300 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-226ENST00000547259 ZNF705BP0CI00 300 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-226ENST00000547259 HLA-DRB4P13762 266 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 PMS2P11Q13670 270 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 TOR2AQ5JU69 321 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 GDF5OSQ5U4N7 250 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 LINC00322Q6ZN03 302 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-226ENST00000547259 STHQ8IWL8 128 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 OR8A1Q8NGG7 326 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms