RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	TEX48	A0A1B0GUV7	120 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	TMEM189	A5PLL7	270 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440		F6UB75	175 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	MRPS12	O15235	138 aa	Known RBP	5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	IGKV3-20	P01619	116 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	SULT1A1	P50225	295 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	BCAP31	P51572	246 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	S100A10	P60903	97 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	HBG1	P69891	147 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	HBG2	P69892	147 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	IL15RA	Q13261	267 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	RAB31	Q13636	194 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	LCN15	Q6UWW0	184 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	AMTN	Q6UX39	209 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	STX12	Q86Y82	276 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	SLC35B3	Q9H1N7	401 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	GPN1	Q9HCN4	374 aa	Predicted RBP	5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	CELA1	Q9UNI1	258 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	GOLT1B	Q9Y3E0	138 aa		5.51	□□□□□ -1.53
SNHG1-223	ENST00000545440	KMT2A	Q03164	3969 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	UBE2L5P	A0A1B0GUS4	154 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	COX7A2P2	O60397	106 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	PRAF2	O60831	178 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	CST7	O76096	145 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	DUSP14	O95147	198 aa	Known RBP	5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	AMBP	P02760	352 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	CXCL3	P19876	107 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	CAMLG	P49069	296 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	CNN1	P51911	297 aa	Known RBP	5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	FXYD7	P58549	80 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	FGL1	Q08830	312 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	PATE2	Q6UY27	113 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440		Q6ZTC4	211 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	LINC00305	Q7Z4B0	112 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	RNF182	Q8N6D2	247 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	ZNF738	Q8NE65	137 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	SLC50A1	Q9BRV3	221 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	UQCC1	Q9NVA1	299 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	WDR83OS	Q9Y284	106 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	RFNG	Q9Y644	331 aa		5.5	□□□□□ -1.53
SNHG1-223	ENST00000545440	IGHV3OR16-12	A0A075B7B8	117 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	IGSF23	A1L1A6	192 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	FAM24A	A6NFZ4	105 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	BOLA2-SMG1P6	H3BVE0	249 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	MPDU1	O75352	247 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	INS	P01308	110 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	HBE1	P02100	147 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	S100A11	P31949	105 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	IFITM3	Q01628	133 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	OPCML	Q14982	345 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	C12orf74	Q32Q52	190 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	C10orf113	Q5VZT2	155 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440		Q6ZRG5	221 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	NRARP	Q7Z6K4	114 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	BPIFA4P	Q86YQ2	179 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	TMEM252	Q8N6L7	170 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	OR11H7	Q8NGC8	314 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	TMEM37	Q8WXS4	190 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	IGF2BP2-AS1	Q96M15	143 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	PFDN5	Q99471	154 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	RNF126	Q9BV68	326 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	NMES1	Q9C002	83 aa		5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	ZNF331	Q9NQX6	463 aa	Predicted RBP	5.49	□□□□□ -1.53
SNHG1-223	ENST00000545440	IGHV4-4	A0A075B6R2	117 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	DEFB131B	A0A096LNP1	70 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	IGLL5	B9A064	214 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	CRX	O43186	299 aa	Predicted RBP	5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	SPART-AS1	P0CW21	52 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	IGLC2	P0DOY2	106 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	RPL29	P47914	159 aa	Known RBP	5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	DEFA1	P59665	94 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	DEFA3	P59666	94 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	B2M	P61769	119 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	HIST1H1A	Q02539	215 aa	Predicted RBP	5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	BAX	Q07812	192 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	PSG3	Q16557	428 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	ATP6V1F	Q16864	119 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	SPINK13	Q1W4C9	94 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	RRN3P1	Q2M238	152 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	MIC13	Q5XKP0	118 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	C1orf158	Q8N1D5	194 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	OR8A1	Q8NGG7	326 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	OR1L4	Q8NGR5	311 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	LRRC20	Q8TCA0	184 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	MARVELD1	Q9BSK0	173 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	SLC39A9	Q9NUM3	307 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	APLN	Q9ULZ1	77 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440	PXMP4	Q9Y6I8	212 aa		5.48	□□□□□ -1.53
SNHG1-223	ENST00000545440		E5RGE8	158 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	INMT-MINDY4	F8WBC2	141 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440		M0R2Z0	102 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	SLC17A3	O00476	420 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	ZNF253	O75346	499 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	FGF7	P21781	194 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	EMP1	P54849	157 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	CYCS	P99999	105 aa	Known RBP	5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	OXA1L	Q15070	435 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	GUK1	Q16774	197 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	FAM222A	Q5U5X8	452 aa		5.47	□□□□□ -1.53
SNHG1-223	ENST00000545440	MORN5	Q5VZ52	161 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms