RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 TRAV8-1A0A0A6YYK1 113 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 OOEPA6NGQ2 149 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 RPL39P5Q59GN2 51 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 ABHD12Q8N2K0 398 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 PIMREGQ9BSJ6 248 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 KLF12Q9Y4X4 402 aa9.04□□□□□ -0.96
CDH4-201ENST00000543233 TRBV25-1A0A075B6N4 114 aa9.03□□□□□ -0.96
CDH4-201ENST00000543233 IGKV2D-26A0A0A0MRZ7 120 aa9.03□□□□□ -0.96
CDH4-201ENST00000543233 TMEM262E9PQX1 116 aa9.03□□□□□ -0.96
CDH4-201ENST00000543233 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
CDH4-201ENST00000543233 UBE2L3P68036 154 aaKnown RBP9.03□□□□□ -0.96
CDH4-201ENST00000543233 ITLN1Q8WWA0 313 aa9.03□□□□□ -0.96
CDH4-201ENST00000543233 A0A1B0GXF2 115 aa9.03□□□□□ -0.96
CDH4-201ENST00000543233 LOXL1Q08397 574 aaPredicted RBP9.03□□□□□ -0.96
CDH4-201ENST00000543233 SRSF9Q13242 221 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDH4-201ENST00000543233 CFAP126Q5VTH2 177 aa9.03□□□□□ -0.96
CDH4-201ENST00000543233 CARD19Q96LW7 228 aa9.03□□□□□ -0.96
CDH4-201ENST00000543233 CITED2Q99967 270 aaPredicted RBP9.03□□□□□ -0.96
CDH4-201ENST00000543233 AMMECR1Q9Y4X0 333 aaPredicted RBP9.03□□□□□ -0.96
CDH4-201ENST00000543233 FAM90A9PA6NNJ1 464 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 SPINT2O43291 252 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 IL4P05112 153 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 EMP1P54849 157 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 LGALS9BQ3B8N2 356 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 GTSCR1Q86UQ5 136 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 CSMD1Q96PZ7 3565 aa9.02□□□□□ -0.96
CDH4-201ENST00000543233 IGKV1D-17A0A075B6S4 117 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 CRLF1O75462 422 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 IFI27P40305 119 aaPredicted RBP9.02□□□□□ -0.97
CDH4-201ENST00000543233 BRWD1-AS2P59051 145 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 Q6ZQT7 251 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 ONECUT1Q9UBC0 465 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 FAM215AQ9Y5M1 114 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 P01737 135 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 SRD5A1P18405 259 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 GNG5P63218 68 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 RASL11BQ9BPW5 248 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 ZNRD1Q9P1U0 126 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 SLC25A15Q9Y619 301 aa9.02□□□□□ -0.97
CDH4-201ENST00000543233 LRBAP50851 2863 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 GFRA3O60609 400 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 TEN1Q86WV5 123 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 NABP2Q9BQ15 211 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 PLXNB1O43157 2135 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 DSCAMO60469 2012 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 CCL8P80075 99 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 IFI27L1Q96BM0 104 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
CDH4-201ENST00000543233 ANKHD1Q8IWZ3 2542 aaKnown RBP9.01□□□□□ -0.97
CDH4-201ENST00000543233 IGFL2Q6UWQ7 119 aa9□□□□□ -0.97
CDH4-201ENST00000543233 RPP21Q9H633 154 aaKnown RBP9□□□□□ -0.97
CDH4-201ENST00000543233 EDA2RQ9HAV5 297 aa9□□□□□ -0.97
CDH4-201ENST00000543233 CACNA1BQ00975 2339 aa9□□□□□ -0.97
CDH4-201ENST00000543233 NPIPB11E5RHQ5 1161 aa9□□□□□ -0.97
CDH4-201ENST00000543233 BSNQ9UPA5 3926 aa9□□□□□ -0.97
CDH4-201ENST00000543233 TRAV3A0A0B4J244 114 aa9□□□□□ -0.97
CDH4-201ENST00000543233 A8MWV9 139 aa9□□□□□ -0.97
CDH4-201ENST00000543233 NBL1P41271 181 aa9□□□□□ -0.97
CDH4-201ENST00000543233 ZNF134P52741 427 aa9□□□□□ -0.97
CDH4-201ENST00000543233 FAM19A5Q7Z5A7 132 aaPredicted RBP9□□□□□ -0.97
CDH4-201ENST00000543233 CCL13Q99616 98 aa9□□□□□ -0.97
CDH4-201ENST00000543233 IGLV1-44P01699 117 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 PRSS1P07477 247 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 MYOD1P15172 320 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 FAM231DQ6ZW35 169 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 SLC25A33Q9BSK2 321 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 CUBNO60494 3623 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 PEX7O00628 323 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 PROP1O75360 226 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 HES1Q14469 280 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 CIARTQ8N365 385 aaPredicted RBP8.99□□□□□ -0.97
CDH4-201ENST00000543233 ANKRD29Q8N6D5 301 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 FAM216BQ8N7L0 139 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 DNAJC30Q96LL9 226 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 CHCHD5Q9BSY4 110 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 EPDR1Q9UM22 224 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 ACACBO00763 2458 aa8.99□□□□□ -0.97
CDH4-201ENST00000543233 RBPMS2Q6ZRY4 209 aaKnown RBP8.98□□□□□ -0.97
CDH4-201ENST00000543233 F5H768 121 aa8.98□□□□□ -0.97
CDH4-201ENST00000543233 MOSP00540 346 aa8.98□□□□□ -0.97
CDH4-201ENST00000543233 THBDP07204 575 aa8.98□□□□□ -0.97
CDH4-201ENST00000543233 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
CDH4-201ENST00000543233 MBD3L4A6NDZ8 208 aaPredicted RBP8.98□□□□□ -0.97
CDH4-201ENST00000543233 MBD3L3A6NE82 208 aaPredicted RBP8.98□□□□□ -0.97
CDH4-201ENST00000543233 MBD3L5A6NJ08 208 aaPredicted RBP8.98□□□□□ -0.97
CDH4-201ENST00000543233 SRRM5B3KS81 715 aa8.98□□□□□ -0.97
CDH4-201ENST00000543233 HOXA3O43365 443 aaPredicted RBP8.98□□□□□ -0.97
CDH4-201ENST00000543233 PYYP10082 97 aa8.98□□□□□ -0.97
CDH4-201ENST00000543233 TNFAIP6P98066 277 aaPredicted RBP8.98□□□□□ -0.97
CDH4-201ENST00000543233 ZFP2Q6ZN57 461 aa8.98□□□□□ -0.97
CDH4-201ENST00000543233 MBD3L2Q8NHZ7 208 aaPredicted RBP8.98□□□□□ -0.97
CDH4-201ENST00000543233 WNK2Q9Y3S1 2297 aa8.97□□□□□ -0.97
CDH4-201ENST00000543233 COL8A1P27658 744 aa8.97□□□□□ -0.97
CDH4-201ENST00000543233 C1orf229Q6ZS94 237 aaPredicted RBP8.97□□□□□ -0.97
CDH4-201ENST00000543233 C10orf126Q8N4M7 172 aa8.97□□□□□ -0.97
CDH4-201ENST00000543233 C15orf65H3BRN8 121 aa8.97□□□□□ -0.97
CDH4-201ENST00000543233 SCGB1C2P0DMR2 95 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms