RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 ZNF818PQ6ZRF7 136 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 Q6ZRU5 148 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 NDUFA11Q86Y39 141 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 ARL17AQ8IVW1 177 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 Q8N7P7 452 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 FAM110DQ8TAY7 271 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-219ENST00000542112 SRXN1Q9BYN0 137 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 PLEKHA3Q9HB20 300 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 NXT2Q9NPJ8 142 aaKnown RBP3.4□□□□□ -1.87
SNHG1-219ENST00000542112 HHLA3Q9XRX5 114 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 PKIGQ9Y2B9 76 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 BRCA2P51587 3418 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 KIAA2026Q5HYC2 2103 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 SCN3AQ9NY46 2000 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 TRAV12-1A0A0B4J245 112 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 A0A0D9SEW6 157 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 TRBV7-6A0A0J9YX20 115 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 PGPA6NDG6 321 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 SRRM4A7MD48 611 aaKnown RBP3.39□□□□□ -1.87
SNHG1-219ENST00000542112 H0YIG0 161 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 SPINK4O60575 86 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 TCL1BO95988 128 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 CT62P0C5K7 136 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 IAPPP10997 89 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 SLC25A16P16260 332 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 FBXW4P57775 412 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 ZNF56Q15929 161 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 MED12LQ86YW9 2145 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 EXOC3-AS1Q8N2X6 119 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 OR8A1Q8NGG7 326 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 NT5CQ8TCD5 201 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 SSMEM1Q8WWF3 244 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 NABP1Q96AH0 204 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 CYYR1Q96J86 154 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 PAXXQ9BUH6 204 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 DPH3P1Q9H4G8 78 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 GNG12Q9UBI6 72 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 LINC00527Q9UJ94 153 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 AMMECR1Q9Y4X0 333 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-219ENST00000542112 F11RQ9Y624 299 aaKnown RBP3.39□□□□□ -1.87
SNHG1-219ENST00000542112 SELENOKQ9Y6D0 94 aa3.39□□□□□ -1.87
SNHG1-219ENST00000542112 NUMA1Q14980 2115 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-219ENST00000542112 TRAV26-2A0A0B4J265 109 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 A0A0B4J2C4 111 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 A0A1B0GUT8 65 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 KNCNA6PVL3 124 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 C16orf97H3BN30 126 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 H3BVH4 76 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 K7EQS6 105 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 PEX7O00628 323 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 CCL16O15467 120 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 NDUFC1O43677 76 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 LYZL6O75951 148 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 LTAP01374 205 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 P01737 135 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 COX6CP09669 75 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 P0C879 139 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 GATA1P15976 413 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-219ENST00000542112 FCER1GP30273 86 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 PCBD1P61457 104 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 RPL18AQ02543 176 aaKnown RBP3.38□□□□□ -1.87
SNHG1-219ENST00000542112 CFHR1Q03591 330 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 PAX8Q06710 450 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 TFF3Q07654 80 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 FXYD3Q14802 87 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 PAPPA-AS1Q5QFB9 102 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 FAM104BQ5XKR9 115 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 ZNF793Q6ZN11 406 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 PRR15Q8IV56 129 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 NEXN-AS1Q8NBZ9 246 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 MDS2Q8NDY4 140 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 NTN5Q8WTR8 489 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-219ENST00000542112 FMC1Q96HJ9 113 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 FAM19A4Q96LR4 140 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 UPK3BQ9BT76 320 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 ZNF355PQ9NSJ1 428 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 CALYQ9NYX4 217 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 PRO1854Q9UHT4 67 aa3.38□□□□□ -1.87
SNHG1-219ENST00000542112 LSM4Q9Y4Z0 139 aaKnown RBP3.38□□□□□ -1.87
SNHG1-219ENST00000542112 MUC22E2RYF6 1773 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-219ENST00000542112 KIF26BQ2KJY2 2108 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 TRBV19A0A075B6N1 114 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 A0A096LNJ9 63 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 TRGV8A0A0C4DH27 118 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 IGKV1-9A0A0C4DH69 117 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 A0A0G2JRQ6 117 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 C5orf63A6NC05 138 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 K7EMI3 77 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 SPINT2O43291 252 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 CXCL13O43927 109 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 IGKV1-5P01602 117 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 EFNA4P52798 201 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 HILS1P60008 231 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 DEFB103AP81534 67 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 HOXA4Q00056 320 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms