RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 K7EQM0 130 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 ZNF25P17030 456 aaPredicted RBP8.97□□□□□ -0.97
C11orf54-214ENST00000540113 GPR183P32249 361 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 TMEM95Q3KNT9 176 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 SPTAN1Q13813 2472 aaKnown RBP8.97□□□□□ -0.97
C11orf54-214ENST00000540113 IGHV3-49A0A0A0MS15 119 aa8.96□□□□□ -0.97
C11orf54-214ENST00000540113 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.96□□□□□ -0.97
C11orf54-214ENST00000540113 A0A1B0GUT8 65 aa8.96□□□□□ -0.97
C11orf54-214ENST00000540113 HAX1O00165 279 aa8.96□□□□□ -0.97
C11orf54-214ENST00000540113 SAA4P35542 130 aa8.96□□□□□ -0.97
C11orf54-214ENST00000540113 UNQ5815/PRO19632Q6UWF5 114 aa8.96□□□□□ -0.97
C11orf54-214ENST00000540113 VGLL1Q99990 258 aa8.96□□□□□ -0.97
C11orf54-214ENST00000540113 ZFP30Q9Y2G7 519 aa8.96□□□□□ -0.97
C11orf54-214ENST00000540113 SERTM2A0A1B0GWG4 89 aa8.96□□□□□ -0.98
C11orf54-214ENST00000540113 TMEM213A2RRL7 107 aa8.96□□□□□ -0.98
C11orf54-214ENST00000540113 ATP6V0E1O15342 81 aa8.96□□□□□ -0.98
C11orf54-214ENST00000540113 LINC00614P0C842 121 aa8.96□□□□□ -0.98
C11orf54-214ENST00000540113 PMCHL2Q9BQD1 86 aa8.96□□□□□ -0.98
C11orf54-214ENST00000540113 SOX21Q9Y651 276 aaPredicted RBP8.96□□□□□ -0.98
C11orf54-214ENST00000540113 ABCA2Q9BZC7 2435 aa8.96□□□□□ -0.98
C11orf54-214ENST00000540113 SH2D1AO60880 128 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 RPLP1P05386 114 aaKnown RBP8.95□□□□□ -0.98
C11orf54-214ENST00000540113 IGLL1P15814 213 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 C15orf32Q32M92 178 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 LYPD1Q8N2G4 141 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 LINC00527Q9UJ94 153 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 ZNF207O43670 478 aaKnown RBP8.95□□□□□ -0.98
C11orf54-214ENST00000540113 IGHV4-39P01824 125 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 PF4P02776 101 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 CLEC3BP05452 202 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 FAM106CPP0CH98 169 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
C11orf54-214ENST00000540113 UBE2E1P51965 193 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 RELQ04864 619 aaPredicted RBP8.95□□□□□ -0.98
C11orf54-214ENST00000540113 FAM106AQ4KMX7 169 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 LYZL1Q6UWQ5 148 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 TMEM219Q86XT9 240 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 RNF182Q8N6D2 247 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 ZNF48Q96MX3 618 aaPredicted RBP8.95□□□□□ -0.98
C11orf54-214ENST00000540113 TMEM70Q9BUB7 260 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 THYN1Q9P016 225 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 UQCR10Q9UDW1 63 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 RNF24Q9Y225 148 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 CFAP46Q8IYW2 2715 aa8.95□□□□□ -0.98
C11orf54-214ENST00000540113 TRBV6-1A0A0K0K1D8 114 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 hDV102S1A0JD36 115 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 FAM231BA6NCW3 169 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 IGHG4P01861 327 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 CT45A10P0DMU9 189 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 HNRNPA3P51991 378 aaKnown RBP8.94□□□□□ -0.98
C11orf54-214ENST00000540113 ERCC8Q13216 396 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 NDFIP1Q9BT67 221 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 RABAC1Q9UI14 185 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 LOC389332A0A1B0GUA5 103 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 CSN1S1P47710 185 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 FXYD7P58549 80 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 RHOGP84095 191 aa8.94□□□□□ -0.98
C11orf54-214ENST00000540113 TRAV9-2A0A087WT02 112 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 TMEM189A5PLL7 270 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 PRAC2D3DTV9 90 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 RIGQ13278 110 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 CYB5R2Q6BCY4 276 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 CLEC19AQ6UXS0 136 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 Q6ZVH6 145 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 STPG4Q8N801 248 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 CLUHP3Q96NS8 147 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 OR4C46A6NHA9 309 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 SYS1-DBNDD2H3BUS1 97 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 M0QZK8 103 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 HINT1P49773 126 aaPredicted RBP8.93□□□□□ -0.98
C11orf54-214ENST00000540113 LOXL1Q08397 574 aaPredicted RBP8.93□□□□□ -0.98
C11orf54-214ENST00000540113 AMN1Q8IY45 258 aa8.93□□□□□ -0.98
C11orf54-214ENST00000540113 A6NJY4 79 aa8.92□□□□□ -0.98
C11orf54-214ENST00000540113 RPL7P18124 248 aaKnown RBP8.92□□□□□ -0.98
C11orf54-214ENST00000540113 PSG9Q00887 426 aa8.92□□□□□ -0.98
C11orf54-214ENST00000540113 PDE6HQ13956 83 aa8.92□□□□□ -0.98
C11orf54-214ENST00000540113 CHCHD1Q96BP2 118 aaKnown RBP8.92□□□□□ -0.98
C11orf54-214ENST00000540113 PRR25Q96S07 402 aa8.92□□□□□ -0.98
C11orf54-214ENST00000540113 SMKR1H3BMG3 65 aa8.92□□□□□ -0.98
C11orf54-214ENST00000540113 ZNF502Q8TBZ5 544 aa8.92□□□□□ -0.98
C11orf54-214ENST00000540113 TMEM208Q9BTX3 173 aa8.92□□□□□ -0.98
C11orf54-214ENST00000540113 D6R8Y8 96 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 NPFFO15130 113 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 TSPOP30536 169 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 IFI27P40305 119 aaPredicted RBP8.91□□□□□ -0.98
C11orf54-214ENST00000540113 FAM162BQ5T6X4 162 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 BRD3OSQ6XYD6 125 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 CCDC140Q96MF4 163 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 LAMTOR2Q9Y2Q5 125 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 CENPVL3A0A0U1RRI6 287 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 NPSP0C0P6 89 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 PPIFP30405 207 aaKnown RBP8.91□□□□□ -0.98
C11orf54-214ENST00000540113 KLHDC1Q8N7A1 406 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 PRSS3P2Q8NHM4 247 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 FAM110DQ8TAY7 271 aaPredicted RBP8.91□□□□□ -0.98
C11orf54-214ENST00000540113 MSRB1Q9NZV6 116 aa8.91□□□□□ -0.98
C11orf54-214ENST00000540113 UTP20O75691 2785 aaKnown RBP8.9□□□□□ -0.98
C11orf54-214ENST00000540113 ZNF575Q86XF7 245 aa8.9□□□□□ -0.98
C11orf54-214ENST00000540113 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms