RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SMR3BP02814 79 aaPredicted RBP7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 KRTAP10-1P60331 282 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 ERVFC1-1P60608 527 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 SMCO1Q147U7 214 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 LRRC37A5PQ49AS3 106 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 Q5BKY6 102 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 IGFL4Q6B9Z1 124 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 DTD1Q8TEA8 209 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 HSPB7Q9UBY9 170 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 SLC45A2Q9UMX9 530 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 J3QL48 77 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 PITX3O75364 302 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 MPC2O95563 127 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 SCGB1D2O95969 90 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 PET100P0DJ07 73 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 HOXA5P20719 270 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 RHOBP62745 196 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 ICAM4Q14773 271 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 RNF182Q8N6D2 247 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 LINC00612Q8N6U2 182 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 OR11H4Q8NGC9 324 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 OR1S1Q8NH92 325 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 THAP6Q8TBB0 222 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 RNASE8Q8TDE3 154 aaKnown RBP7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 TMEM263Q8WUH6 116 aaKnown RBP7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 GPR82Q96P67 336 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 RBKSQ9H477 322 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 PPP1R14DQ9NXH3 145 aa7.98□□□□□ -1.13
CLSTN3-209ENST00000539982 IGKV1OR2-108A0A075B7D4 117 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 FXYD6-FXYD2A0A087WZ82 144 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 K7EPK0 472 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 MBPP02686 304 aaPredicted RBP7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 RLN2P04090 185 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 NKX2-5P52952 324 aaPredicted RBP7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 S100A10P60903 97 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 ID3Q02535 119 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 RAB32Q13637 225 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 THAP8Q8NA92 274 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 ZNF738Q8NE65 137 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 MBD2Q9UBB5 411 aa7.97□□□□□ -1.13
CLSTN3-209ENST00000539982 HMSDA8MTL9 139 aa7.96□□□□□ -1.14
CLSTN3-209ENST00000539982 H7BYZ3 331 aa7.96□□□□□ -1.14
CLSTN3-209ENST00000539982 SIVA1O15304 175 aa7.96□□□□□ -1.14
CLSTN3-209ENST00000539982 S100A7P31151 101 aa7.96□□□□□ -1.14
CLSTN3-209ENST00000539982 HIST1H1AQ02539 215 aaPredicted RBP7.96□□□□□ -1.14
CLSTN3-209ENST00000539982 OR8A1Q8NGG7 326 aa7.96□□□□□ -1.14
CLSTN3-209ENST00000539982 LSM5Q9Y4Y9 91 aaKnown RBP7.96□□□□□ -1.14
CLSTN3-209ENST00000539982 A0A087WTM6 91 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 GAGE12BA1L429 117 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 H0YIZ8 118 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 WRBO00258 174 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 ARPC5O15511 151 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 GAGE7O76087 117 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 GAGE12FP0CL80 117 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 GAGE12GP0CL81 117 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 GAGE12IP0CL82 117 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 ORM2P19652 201 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 CDKN1BP46527 198 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 Q6ZSN1 163 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 ZNF546Q86UE3 836 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 NFE4Q86UQ8 179 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 CCDC28AQ8IWP9 274 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 OR5AC2Q9NZP5 309 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 RCL1Q9Y2P8 373 aaKnown RBP7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 TNFRSF18Q9Y5U5 241 aa7.95□□□□□ -1.14
CLSTN3-209ENST00000539982 A0A096LPF7 62 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 E5RGE8 158 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 MED6O75586 246 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 PVALBP20472 110 aaPredicted RBP7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 GCSHP23434 173 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 POLR2GP62487 172 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 RAB11AP62491 216 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 PSG3Q16557 428 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 C9orf62Q8N4C0 152 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 BPIFCQ8NFQ6 507 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 VSIG2Q96IQ7 327 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 C20orf144Q9BQM9 153 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 TMEM147Q9BVK8 224 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 TNFSF18Q9UNG2 199 aa7.94□□□□□ -1.14
CLSTN3-209ENST00000539982 L7N2F9 121 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 SYNGR2O43760 224 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 SSSCA1O60232 199 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 DNAH10OSP0CZ25 163 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 CXCL2P19875 107 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 GATA2P23769 480 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 VAMP2P63027 116 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 LGALSLQ3ZCW2 172 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 TMEM182Q6ZP80 229 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 INO80EQ8NBZ0 244 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 C11orf1Q9H5F2 150 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 HSPB11Q9Y547 144 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
CLSTN3-209ENST00000539982 A0A0D9SG52 128 aa7.92□□□□□ -1.14
CLSTN3-209ENST00000539982 SNURFLB1AK76 121 aa7.92□□□□□ -1.14
CLSTN3-209ENST00000539982 RPL7P18124 248 aaKnown RBP7.92□□□□□ -1.14
CLSTN3-209ENST00000539982 TAS2R30P59541 319 aa7.92□□□□□ -1.14
CLSTN3-209ENST00000539982 ZNF345Q14585 488 aa7.92□□□□□ -1.14
CLSTN3-209ENST00000539982 ACOT7LQ6ZUV0 252 aa7.92□□□□□ -1.14
CLSTN3-209ENST00000539982 AQP10Q96PS8 301 aa7.92□□□□□ -1.14
CLSTN3-209ENST00000539982 TMPRSS5Q9H3S3 457 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 305.5 ms