RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 MRPS16Q9Y3D3 137 aaKnown RBP6.58□□□□□ -1.36
ABCA4-207ENST00000536513 LSM4Q9Y4Z0 139 aaKnown RBP6.58□□□□□ -1.36
ABCA4-207ENST00000536513 NACAE9PAV3 2078 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 TRAV25A0A0B4J276 109 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 C15orf61A6NNL5 157 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 H3BUX3 64 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 UPK2O00526 184 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 SPATA31B1PQ5VZV4 182 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 TSKUQ8WUA8 353 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 TXNDC17Q9BRA2 123 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 SLC25A33Q9BSK2 321 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 THYN1Q9P016 225 aa6.58□□□□□ -1.36
ABCA4-207ENST00000536513 MAST4O15021 2626 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 CORTO00230 105 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 P01737 135 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 RPL15P61313 204 aaKnown RBP6.57□□□□□ -1.36
ABCA4-207ENST00000536513 SSBP2P81877 361 aaPredicted RBP6.57□□□□□ -1.36
ABCA4-207ENST00000536513 VSTM2AQ8TAG5 236 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 TET2Q6N021 2002 aaPredicted RBP6.57□□□□□ -1.36
ABCA4-207ENST00000536513 MXRA5Q9NR99 2828 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 TMSB15BA0A087X1C1 80 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 TRAV5A0A0B4J249 113 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 IGHV2-70DA0A0C4DH43 119 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 FAM181BA6NEQ2 426 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 C15orf62A8K5M9 175 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 M0QXV9 152 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 PRSS1P07477 247 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 KIR2DS2P43631 304 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 SUB1P53999 127 aaKnown RBP eCLIP6.57□□□□□ -1.36
ABCA4-207ENST00000536513 SRSF7Q16629 238 aaKnown RBP eCLIP6.57□□□□□ -1.36
ABCA4-207ENST00000536513 SIGMAR1Q99720 223 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 GNB1LQ9BYB4 327 aa6.57□□□□□ -1.36
ABCA4-207ENST00000536513 FAM90A26D6RGX4 464 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 CGB3P0DN86 165 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 CGB7P0DN87 165 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 WT1-ASQ06250 92 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 MIR17HGQ75NE6 70 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 WFDC3Q8IUB2 231 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 OR1L4Q8NGR5 311 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 BEX4Q9NWD9 120 aaPredicted RBP6.56□□□□□ -1.36
ABCA4-207ENST00000536513 A0A1W2PPI3 338 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 NDUFB8O95169 186 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 ZNF138P52744 262 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 TMEM144Q7Z5S9 345 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 FER1L6-AS1Q8NA97 138 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 OSR1Q8TAX0 266 aaPredicted RBP6.56□□□□□ -1.36
ABCA4-207ENST00000536513 FOXA2Q9Y261 457 aaPredicted RBP6.56□□□□□ -1.36
ABCA4-207ENST00000536513 FAM231BA6NCW3 169 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 FAM106CPP0CH98 169 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 NPPCP23582 126 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 PAX2Q02962 417 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 C11orf71Q6IPW1 123 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 TCF24Q7RTU0 167 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 BCL6BQ8N143 479 aaPredicted RBP6.56□□□□□ -1.36
ABCA4-207ENST00000536513 TP73-AS1Q9UF72 201 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 BAHCC1Q9P281 2608 aa6.56□□□□□ -1.36
ABCA4-207ENST00000536513 CGB1A6NKQ9 187 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 LINC01548A6NM66 108 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 PRTN3P24158 256 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 CX3CL1P78423 397 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 RBPMS2Q6ZRY4 209 aaKnown RBP6.55□□□□□ -1.36
ABCA4-207ENST00000536513 DTX2Q86UW9 622 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 WFDC11Q8NEX6 87 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 DSCAML1Q8TD84 2053 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 TRAV26-1A0A087WT03 109 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 HIGD1CA8MV81 97 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 MPDU1O75352 247 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 YPEL3P61236 119 aaPredicted RBP6.55□□□□□ -1.36
ABCA4-207ENST00000536513 SRSF1Q07955 248 aaKnown RBP eCLIP6.55□□□□□ -1.36
ABCA4-207ENST00000536513 TMEM249Q2WGJ8 235 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 TMEM97Q5BJF2 176 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 OR10J3Q5JRS4 329 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 KAAG1Q9UBP8 84 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 SIGLEC9Q9Y336 463 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.55□□□□□ -1.36
ABCA4-207ENST00000536513 NBR2O15453 112 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 LMO4P61968 165 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 Q0VG73 95 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 PIP4P2Q8N4L2 257 aa6.55□□□□□ -1.36
ABCA4-207ENST00000536513 ESDP10768 282 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 ZNF562Q6V9R5 426 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 PDPNQ86YL7 162 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 TSSC4Q9Y5U2 329 aaPredicted RBP6.54□□□□□ -1.36
ABCA4-207ENST00000536513 A8MWL6 223 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 NPFFO15130 113 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 MSMBP08118 114 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 CT45A10P0DMU9 189 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 PYYP10082 97 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 IGFL4Q6B9Z1 124 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 TMEM14EPQ6UXP3 125 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 AP5S1Q9NUS5 200 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 TRBV7-9A0A0J9YWB2 115 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 K7EP13 123 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 BLCAPP62952 87 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 OR5AN1Q8NGI8 311 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 LINC00479Q96M42 142 aa6.54□□□□□ -1.36
ABCA4-207ENST00000536513 WDR83OSQ9Y284 106 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms