RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 BORCS8Q96FH0 119 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 TAF9BQ9HBM6 251 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 MYH10P35580 1976 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 MYO9AB2RTY4 2548 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 COL6A5A8TX70 2615 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 MCM3APO60318 1980 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 KIAA1549Q9HCM3 1950 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 ASH1LQ9NR48 2969 aaKnown RBP1.07□□□□□ -2.24
PRKDC-205ENST00000535375 SCN3AQ9NY46 2000 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 hDV103S1A0JD37 113 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 CD2P06729 351 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 SPRNQ5BIV9 151 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 FAM74A1Q5RGS3 127 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 OR5AS1Q8N127 324 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 FAM216BQ8N7L0 139 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 PSMF1Q92530 271 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 RMND5BQ96G75 393 aaPredicted RBP1.07□□□□□ -2.24
PRKDC-205ENST00000535375 SELENOSQ9BQE4 189 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 GGACTQ9BVM4 153 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 NAT8BQ9UHF3 227 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 BDP1A6H8Y1 2624 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 PLXNA4Q9HCM2 1894 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 PIK3C2AO00443 1686 aa1.07□□□□□ -2.24
PRKDC-205ENST00000535375 ANKHD1Q8IWZ3 2542 aaKnown RBP1.07□□□□□ -2.24
PRKDC-205ENST00000535375 CECR2Q9BXF3 1484 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 LAMA2P24043 3122 aaKnown RBP1.06□□□□□ -2.24
PRKDC-205ENST00000535375 FASNP49327 2511 aaKnown RBP1.06□□□□□ -2.24
PRKDC-205ENST00000535375 OR2T8A6NH00 312 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 IFNA21P01568 189 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 BCL2P10415 239 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 TOMM20LQ6UXN7 152 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 ANGPTL5Q86XS5 388 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 CCL4L1Q8NHW4 92 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 THEM6Q8WUY1 208 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 CCDC32Q9BV29 185 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 ABCA12Q86UK0 2595 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 NBEAL2Q6ZNJ1 2754 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 EYSQ5T1H1 3165 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 RYR1P21817 5038 aa1.06□□□□□ -2.24
PRKDC-205ENST00000535375 NAV3Q8IVL0 2385 aa1.05□□□□□ -2.24
PRKDC-205ENST00000535375 E7EQ34 232 aa1.05□□□□□ -2.24
PRKDC-205ENST00000535375 GABARAPH6UMI1 98 aa1.05□□□□□ -2.24
PRKDC-205ENST00000535375 KPNA4O00629 521 aaPredicted RBP1.05□□□□□ -2.24
PRKDC-205ENST00000535375 EIF3IQ13347 325 aaKnown RBP1.05□□□□□ -2.24
PRKDC-205ENST00000535375 LINC00322Q6ZN03 302 aaPredicted RBP1.05□□□□□ -2.24
PRKDC-205ENST00000535375 DIRC1Q969H9 104 aa1.05□□□□□ -2.24
PRKDC-205ENST00000535375 BORCS5Q969J3 196 aa1.05□□□□□ -2.24
PRKDC-205ENST00000535375 LAMTOR2Q9Y2Q5 125 aa1.05□□□□□ -2.24
PRKDC-205ENST00000535375 TNRC6AQ8NDV7 1962 aaKnown RBP1.05□□□□□ -2.24
PRKDC-205ENST00000535375 KALRNO60229 2985 aa1.05□□□□□ -2.24
PRKDC-205ENST00000535375 CFAP47Q6ZTR5 3102 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 COL24A1Q17RW2 1714 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 MYO5AQ9Y4I1 1855 aaKnown RBP1.04□□□□□ -2.24
PRKDC-205ENST00000535375 PFDN1O60925 122 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 COX7CP15954 63 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 S100A11P31949 105 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 POLR2HP52434 150 aaKnown RBP1.04□□□□□ -2.24
PRKDC-205ENST00000535375 DEFB115Q30KQ5 88 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 SMIM15Q7Z3B0 74 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 LRRC18Q8N456 261 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 OR10AG1Q8NH19 301 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 EFCAB11Q9BUY7 163 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 ZNF292O60281 2723 aa1.04□□□□□ -2.24
PRKDC-205ENST00000535375 COL1A1P02452 1464 aaPredicted RBP1.04□□□□□ -2.24
PRKDC-205ENST00000535375 N4BP2Q86UW6 1770 aaPredicted RBP1.03□□□□□ -2.24
PRKDC-205ENST00000535375 TENM4Q6N022 2769 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 PRORSD1PA6NEY8 169 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 F8W1H4 67 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 LYRM1O43325 122 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 NBEAP1P0C6P0 100 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 PSG9Q00887 426 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 PRB3Q04118 309 aaPredicted RBP1.03□□□□□ -2.24
PRKDC-205ENST00000535375 TMEM128Q5BJH2 165 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 HRCT1Q6UXD1 115 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 CROCCP2Q86T23 111 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 LINC00269Q8N2A0 174 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 ZNF431Q8TF32 576 aaPredicted RBP1.03□□□□□ -2.24
PRKDC-205ENST00000535375 MCEEQ96PE7 176 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 TCEAL2Q9H3H9 227 aaPredicted RBP1.03□□□□□ -2.24
PRKDC-205ENST00000535375 TMEM14CQ9P0S9 112 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 NDUFAF1Q9Y375 327 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 MED31Q9Y3C7 131 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 BCL9O00512 1426 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 KIAA1107Q9UPP5 1409 aa1.03□□□□□ -2.24
PRKDC-205ENST00000535375 C5orf67F2Z3F1 127 aa1.02□□□□□ -2.25
PRKDC-205ENST00000535375 H0YJX3 145 aa1.02□□□□□ -2.25
PRKDC-205ENST00000535375 FAM107AO95990 144 aa1.02□□□□□ -2.25
PRKDC-205ENST00000535375 RPL7P18124 248 aaKnown RBP1.02□□□□□ -2.25
PRKDC-205ENST00000535375 NCOA6Q14686 2063 aaPredicted RBP1.02□□□□□ -2.25
PRKDC-205ENST00000535375 TENM3Q9P273 2699 aa1.02□□□□□ -2.25
PRKDC-205ENST00000535375 NCOR2Q9Y618 2525 aa1.02□□□□□ -2.25
PRKDC-205ENST00000535375 GCN1Q92616 2671 aaKnown RBP1.02□□□□□ -2.25
PRKDC-205ENST00000535375 SPTBN4Q9H254 2564 aa1.02□□□□□ -2.25
PRKDC-205ENST00000535375 TRBV7-6A0A0J9YX20 115 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 C9orf170A2RU37 121 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 MRPS36P82909 103 aaKnown RBP1.01□□□□□ -2.25
PRKDC-205ENST00000535375 TEN1Q86WV5 123 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 OR9Q1Q8NGQ5 310 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 NCOR1O75376 2440 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 DNHD1Q96M86 4753 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms