RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 ONECUT1Q9UBC0 465 aa13□□□□□ -0.33
CTSB-228ENST00000533455 RABAC1Q9UI14 185 aa13□□□□□ -0.33
CTSB-228ENST00000533455 BOD1L1Q8NFC6 3051 aa13□□□□□ -0.33
CTSB-228ENST00000533455 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
CTSB-228ENST00000533455 SMAD7O15105 426 aaKnown RBP13□□□□□ -0.33
CTSB-228ENST00000533455 SNAI2O43623 268 aa13□□□□□ -0.33
CTSB-228ENST00000533455 CACNG7P62955 275 aa13□□□□□ -0.33
CTSB-228ENST00000533455 SRSF2Q01130 221 aaKnown RBP13□□□□□ -0.33
CTSB-228ENST00000533455 PRR25Q96S07 402 aa13□□□□□ -0.33
CTSB-228ENST00000533455 SMG1Q96Q15 3661 aaKnown RBP12.99□□□□□ -0.33
CTSB-228ENST00000533455 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.99□□□□□ -0.33
CTSB-228ENST00000533455 H3BRM9 83 aa12.99□□□□□ -0.33
CTSB-228ENST00000533455 IGLC6P0CF74 106 aa12.99□□□□□ -0.33
CTSB-228ENST00000533455 NBL1P41271 181 aa12.99□□□□□ -0.33
CTSB-228ENST00000533455 KLF17Q5JT82 389 aaPredicted RBP12.99□□□□□ -0.33
CTSB-228ENST00000533455 IGFBPL1Q8WX77 278 aa12.99□□□□□ -0.33
CTSB-228ENST00000533455 ABHD17AQ96GS6 310 aa12.99□□□□□ -0.33
CTSB-228ENST00000533455 AKAP13Q12802 2813 aa12.99□□□□□ -0.33
CTSB-228ENST00000533455 IGKV2-40A0A087WW87 121 aaPredicted RBP12.98□□□□□ -0.33
CTSB-228ENST00000533455 A6NDN8 102 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 IGKV2D-40P01614 121 aaPredicted RBP12.98□□□□□ -0.33
CTSB-228ENST00000533455 RPL7P18124 248 aaKnown RBP12.98□□□□□ -0.33
CTSB-228ENST00000533455 HSD52Q0P140 79 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 C5orf64Q2M2E5 130 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 IFI27L1Q96BM0 104 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 S4R3C0 116 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 NPYP01303 97 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 EGR2P11161 476 aaPredicted RBP12.98□□□□□ -0.33
CTSB-228ENST00000533455 CEACAM3P40198 252 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 COTL1Q14019 142 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 UFSP1Q6NVU6 142 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
CTSB-228ENST00000533455 PTPRZ1P23471 2315 aaPredicted RBP12.97□□□□□ -0.33
CTSB-228ENST00000533455 PCNX1Q96RV3 2341 aa12.97□□□□□ -0.33
CTSB-228ENST00000533455 GAGE12BA1L429 117 aa12.97□□□□□ -0.33
CTSB-228ENST00000533455 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
CTSB-228ENST00000533455 C9orf118A6NHY6 69 aa12.97□□□□□ -0.33
CTSB-228ENST00000533455 BMI1P35226 326 aa12.97□□□□□ -0.33
CTSB-228ENST00000533455 TTC9CQ8N5M4 171 aa12.97□□□□□ -0.33
CTSB-228ENST00000533455 OR4X2Q8NGF9 303 aa12.97□□□□□ -0.33
CTSB-228ENST00000533455 A1L4Q6 167 aa12.96□□□□□ -0.33
CTSB-228ENST00000533455 ODF3BA8MYP8 253 aa12.96□□□□□ -0.33
CTSB-228ENST00000533455 CKS2P33552 79 aa12.96□□□□□ -0.33
CTSB-228ENST00000533455 PSMG3-AS1Q96PY0 264 aa12.96□□□□□ -0.33
CTSB-228ENST00000533455 C21orf62Q9NYP8 219 aa12.96□□□□□ -0.33
CTSB-228ENST00000533455 HILPDAQ9Y5L2 63 aa12.96□□□□□ -0.33
CTSB-228ENST00000533455 ZNF672Q499Z4 452 aaPredicted RBP12.96□□□□□ -0.34
CTSB-228ENST00000533455 ADAMTSL5Q6ZMM2 481 aa12.96□□□□□ -0.34
CTSB-228ENST00000533455 PIFOQ8TCI5 191 aa12.96□□□□□ -0.34
CTSB-228ENST00000533455 ARPC1AQ92747 370 aa12.96□□□□□ -0.34
CTSB-228ENST00000533455 NDUFS7O75251 213 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
CTSB-228ENST00000533455 ZNF562Q6V9R5 426 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 CNFNQ9BYD5 112 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 SPTBN2O15020 2390 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 GAGE10A6NGK3 116 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 UQCRFS1P47985 274 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 TWIST1Q15672 202 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 GTF2H5Q6ZYL4 71 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 ZNF575Q86XF7 245 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 THYN1Q9P016 225 aa12.95□□□□□ -0.34
CTSB-228ENST00000533455 SMKR1H3BMG3 65 aa12.94□□□□□ -0.34
CTSB-228ENST00000533455 K7ERU9 68 aa12.94□□□□□ -0.34
CTSB-228ENST00000533455 M0R1W7 72 aa12.94□□□□□ -0.34
CTSB-228ENST00000533455 IGHG4P01861 327 aa12.94□□□□□ -0.34
CTSB-228ENST00000533455 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
CTSB-228ENST00000533455 JMJD8Q96S16 334 aa12.94□□□□□ -0.34
CTSB-228ENST00000533455 VPS25Q9BRG1 176 aa12.94□□□□□ -0.34
CTSB-228ENST00000533455 SMAD5-AS1Q9Y6J3 95 aa12.94□□□□□ -0.34
CTSB-228ENST00000533455 POLEQ07864 2286 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 SCGB2A1O75556 95 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 FXYD7P58549 80 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 NDPQ00604 133 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 PSMG4Q5JS54 123 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 Q8TAT8 98 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 VGLL1Q99990 258 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 HES1Q14469 280 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 KIR3DS1Q14943 382 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 SMIM15Q7Z3B0 74 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 AP1S3Q96PC3 154 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 MAP1LC3AQ9H492 121 aa12.93□□□□□ -0.34
CTSB-228ENST00000533455 K7EP34 96 aa12.92□□□□□ -0.34
CTSB-228ENST00000533455 KLRD1Q13241 179 aa12.92□□□□□ -0.34
CTSB-228ENST00000533455 PRR30Q53SZ7 412 aaPredicted RBP12.92□□□□□ -0.34
CTSB-228ENST00000533455 Q8N6K4 173 aa12.92□□□□□ -0.34
CTSB-228ENST00000533455 VKORC1Q9BQB6 163 aa12.92□□□□□ -0.34
CTSB-228ENST00000533455 CTSGP08311 255 aa12.91□□□□□ -0.34
CTSB-228ENST00000533455 PRTN3P24158 256 aa12.91□□□□□ -0.34
CTSB-228ENST00000533455 S100A7P31151 101 aa12.91□□□□□ -0.34
CTSB-228ENST00000533455 ZMAT4Q9H898 229 aa12.91□□□□□ -0.34
CTSB-228ENST00000533455 BSNQ9UPA5 3926 aa12.91□□□□□ -0.34
CTSB-228ENST00000533455 APC2O95996 2303 aa12.9□□□□□ -0.34
CTSB-228ENST00000533455 MGAQ8IWI9 3026 aa12.9□□□□□ -0.34
CTSB-228ENST00000533455 ZZEF1O43149 2961 aa12.9□□□□□ -0.34
CTSB-228ENST00000533455 FCER1GP30273 86 aa12.9□□□□□ -0.34
CTSB-228ENST00000533455 LINC01559Q495D7 138 aa12.9□□□□□ -0.34
CTSB-228ENST00000533455 PCP2Q8IVA1 136 aa12.9□□□□□ -0.34
CTSB-228ENST00000533455 LINC01560Q8TB33 94 aa12.9□□□□□ -0.34
CTSB-228ENST00000533455 DKK2Q9UBU2 259 aa12.9□□□□□ -0.34
CTSB-228ENST00000533455 A0A0G2JLM5 398 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms