RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 NUDT15Q9NV35 164 aa11.79□□□□□ -0.52
CPSF1-207ENST00000531727 WDR83OSQ9Y284 106 aa11.79□□□□□ -0.52
CPSF1-207ENST00000531727 DYNC1H1Q14204 4646 aaKnown RBP11.78□□□□□ -0.52
CPSF1-207ENST00000531727 FAM24AA6NFZ4 105 aa11.78□□□□□ -0.52
CPSF1-207ENST00000531727 GUK1Q16774 197 aa11.78□□□□□ -0.52
CPSF1-207ENST00000531727 GFI1BQ5VTD9 330 aa11.78□□□□□ -0.52
CPSF1-207ENST00000531727 MIC13Q5XKP0 118 aa11.78□□□□□ -0.52
CPSF1-207ENST00000531727 OR1L4Q8NGR5 311 aa11.78□□□□□ -0.52
CPSF1-207ENST00000531727 ZNRF2Q8NHG8 242 aa11.78□□□□□ -0.52
CPSF1-207ENST00000531727 C2orf50Q96LR7 162 aa11.78□□□□□ -0.52
CPSF1-207ENST00000531727 UQCC1Q9NVA1 299 aa11.78□□□□□ -0.52
CPSF1-207ENST00000531727 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.53
CPSF1-207ENST00000531727 PVALBP20472 110 aaPredicted RBP11.77□□□□□ -0.53
CPSF1-207ENST00000531727 VWC2Q2TAL6 325 aa11.77□□□□□ -0.53
CPSF1-207ENST00000531727 C12orf45Q8N5I9 185 aaPredicted RBP11.77□□□□□ -0.53
CPSF1-207ENST00000531727 RNF141Q8WVD5 230 aa11.77□□□□□ -0.53
CPSF1-207ENST00000531727 PFDN5Q99471 154 aa11.77□□□□□ -0.53
CPSF1-207ENST00000531727 NBDYA0A0U1RRE5 68 aa11.76□□□□□ -0.53
CPSF1-207ENST00000531727 CCL18P55774 89 aa11.76□□□□□ -0.53
CPSF1-207ENST00000531727 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
CPSF1-207ENST00000531727 LINC00612Q8N6U2 182 aa11.76□□□□□ -0.53
CPSF1-207ENST00000531727 ODF3Q96PU9 254 aa11.76□□□□□ -0.53
CPSF1-207ENST00000531727 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
CPSF1-207ENST00000531727 DNAH11Q96DT5 4516 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 UBE2L5PA0A1B0GUS4 154 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 H2AFB2P0C5Z0 115 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 CT45A10P0DMU9 189 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 S100A11P31949 105 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 RPL29P47914 159 aaKnown RBP11.75□□□□□ -0.53
CPSF1-207ENST00000531727 SULT1A1P50225 295 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 S100A10P60903 97 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 BAXQ07812 192 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 CCDC32Q9BV29 185 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 SLC39A9Q9NUM3 307 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 NDUFA13Q9P0J0 144 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 LINC00588Q9Y4M8 146 aa11.75□□□□□ -0.53
CPSF1-207ENST00000531727 IGSF23A1L1A6 192 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 ZNF253O75346 499 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 LEPP41159 167 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 HBG1P69891 147 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 HBG2P69892 147 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 IL15RAQ13261 267 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 RAB32Q13637 225 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 CLINT1Q14677 625 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 ZNF575Q86XF7 245 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 STX12Q86Y82 276 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 CHAC2Q8WUX2 184 aa11.74□□□□□ -0.53
CPSF1-207ENST00000531727 TRAV12-3A0A0B4J271 114 aa11.73□□□□□ -0.53
CPSF1-207ENST00000531727 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
CPSF1-207ENST00000531727 J3KRW8 73 aa11.73□□□□□ -0.53
CPSF1-207ENST00000531727 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
CPSF1-207ENST00000531727 TMEM252Q8N6L7 170 aa11.73□□□□□ -0.53
CPSF1-207ENST00000531727 MRPL53Q96EL3 112 aaKnown RBP11.73□□□□□ -0.53
CPSF1-207ENST00000531727 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 RLN2P04090 185 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 M6PRP20645 277 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 FGF7P21781 194 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 TNP2Q05952 138 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 OR5I1Q13606 314 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 ATP6V1FQ16864 119 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 SSX7Q7RTT5 188 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 GNPNAT1Q96EK6 184 aaPredicted RBP11.72□□□□□ -0.53
CPSF1-207ENST00000531727 ZNF503Q96F45 646 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 TMEM14CQ9P0S9 112 aa11.72□□□□□ -0.53
CPSF1-207ENST00000531727 TRAV26-1A0A087WT03 109 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 FAM240BA0A1B0GVZ2 78 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 GAGE12BA1L429 117 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 MPDU1O75352 247 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 GAGE7O76087 117 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 GAGE12FP0CL80 117 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 GAGE12GP0CL81 117 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 GAGE12IP0CL82 117 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 RXFP4Q8TDU9 374 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 GPN1Q9HCN4 374 aaPredicted RBP11.71□□□□□ -0.53
CPSF1-207ENST00000531727 PRELID1Q9Y255 219 aa11.71□□□□□ -0.53
CPSF1-207ENST00000531727 M0R3E3 92 aa11.7□□□□□ -0.54
CPSF1-207ENST00000531727 SLC25A5P05141 298 aaKnown RBP11.7□□□□□ -0.54
CPSF1-207ENST00000531727 HIST1H1EP10412 219 aaKnown RBP11.7□□□□□ -0.54
CPSF1-207ENST00000531727 HOXA5P20719 270 aa11.7□□□□□ -0.54
CPSF1-207ENST00000531727 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
CPSF1-207ENST00000531727 ERCC8Q13216 396 aa11.7□□□□□ -0.54
CPSF1-207ENST00000531727 PDE6HQ13956 83 aa11.7□□□□□ -0.54
CPSF1-207ENST00000531727 TIMM9Q9Y5J7 89 aa11.7□□□□□ -0.54
CPSF1-207ENST00000531727 A0A0J9YY99 117 aa11.69□□□□□ -0.54
CPSF1-207ENST00000531727 H3BNG1 76 aa11.69□□□□□ -0.54
CPSF1-207ENST00000531727 NDUFB4O95168 129 aa11.69□□□□□ -0.54
CPSF1-207ENST00000531727 PYYP10082 97 aa11.69□□□□□ -0.54
CPSF1-207ENST00000531727 MZT2BQ6NZ67 158 aa11.69□□□□□ -0.54
CPSF1-207ENST00000531727 LINC00477Q96M19 166 aa11.69□□□□□ -0.54
CPSF1-207ENST00000531727 Q9H8V8 135 aa11.69□□□□□ -0.54
CPSF1-207ENST00000531727 C7orf71A4D174 169 aa11.68□□□□□ -0.54
CPSF1-207ENST00000531727 KLLNB2CW77 178 aa11.68□□□□□ -0.54
CPSF1-207ENST00000531727 ZNF680Q8NEM1 530 aa11.68□□□□□ -0.54
CPSF1-207ENST00000531727 FAM19A4Q96LR4 140 aa11.68□□□□□ -0.54
CPSF1-207ENST00000531727 NPCDR1Q9BY65 106 aa11.68□□□□□ -0.54
CPSF1-207ENST00000531727 TMPRSS5Q9H3S3 457 aa11.68□□□□□ -0.54
CPSF1-207ENST00000531727 ASAH1Q13510 395 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms