RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 IGHV3OR16-12A0A075B7B8 117 aa11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 M0R2Z0 102 aa11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 RPL12P30050 165 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 CLINT1Q14677 625 aa11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 THAP6Q8TBB0 222 aa11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 C20orf144Q9BQM9 153 aa11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 MRPL32Q9BYC8 188 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 APLNQ9ULZ1 77 aa11.05□□□□□ -0.64
CCDC90B-215ENST00000529745 LOC102723971A0A1B0GUV8 181 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 C17orf112F2Z3M2 114 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 LY6G6CO95867 125 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 CDKN1BP46527 198 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 GCSAMLQ5JQS6 135 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 FAM167A-AS1Q96KT0 104 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 ODF3Q96PU9 254 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 MBD2Q9UBB5 411 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 PRELID1Q9Y255 219 aa11.04□□□□□ -0.64
CCDC90B-215ENST00000529745 HECTD4Q9Y4D8 3996 aa11.03□□□□□ -0.64
CCDC90B-215ENST00000529745 NDUFB4O95168 129 aa11.03□□□□□ -0.64
CCDC90B-215ENST00000529745 RHOBP62745 196 aa11.03□□□□□ -0.64
CCDC90B-215ENST00000529745 BAP18Q8IXM2 172 aa11.03□□□□□ -0.64
CCDC90B-215ENST00000529745 SLC25A2Q9BXI2 301 aa11.03□□□□□ -0.64
CCDC90B-215ENST00000529745 DEFB131BA0A096LNP1 70 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 PRAC2D3DTV9 90 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 NPIPB6E9PJ23 425 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 H3BTX0 84 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 SNRPCP09234 159 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 OR10J6PQ8NGY7 276 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 ASB13Q8WXK3 278 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 NIPSNAP3BQ9BS92 247 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 TMEM208Q9BTX3 173 aa11.02□□□□□ -0.65
CCDC90B-215ENST00000529745 IGHV4-4A0A075B6R2 117 aa11.01□□□□□ -0.65
CCDC90B-215ENST00000529745 IGLL5B9A064 214 aa11.01□□□□□ -0.65
CCDC90B-215ENST00000529745 PYYP10082 97 aa11.01□□□□□ -0.65
CCDC90B-215ENST00000529745 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
CCDC90B-215ENST00000529745 PPP1R14DQ9NXH3 145 aa11.01□□□□□ -0.65
CCDC90B-215ENST00000529745 FUT9Q9Y231 359 aa11.01□□□□□ -0.65
CCDC90B-215ENST00000529745 YTHDF2Q9Y5A9 579 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-215ENST00000529745 TRAV12-2A0A075B6T6 113 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 PLAC8L1A1L4L8 177 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 LYRM9A8MSI8 78 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 IFNA5P01569 189 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 TAS2R60P59551 318 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 MIR17HGQ75NE6 70 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 RPP25LQ8N5L8 163 aaKnown RBP11□□□□□ -0.65
CCDC90B-215ENST00000529745 MED28Q9H204 178 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 OR51M1Q9H341 326 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 KMT2AQ03164 3969 aa11□□□□□ -0.65
CCDC90B-215ENST00000529745 KIAA1109Q2LD37 5005 aa10.99□□□□□ -0.65
CCDC90B-215ENST00000529745 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
CCDC90B-215ENST00000529745 EMP1P54849 157 aa10.99□□□□□ -0.65
CCDC90B-215ENST00000529745 FCN2Q15485 313 aa10.99□□□□□ -0.65
CCDC90B-215ENST00000529745 ZNF767PQ75MW2 155 aa10.99□□□□□ -0.65
CCDC90B-215ENST00000529745 SCGB1C1Q8TD33 95 aa10.99□□□□□ -0.65
CCDC90B-215ENST00000529745 FXYD5Q96DB9 178 aa10.99□□□□□ -0.65
CCDC90B-215ENST00000529745 TIMM9Q9Y5J7 89 aa10.99□□□□□ -0.65
CCDC90B-215ENST00000529745 ZNF705GA8MUZ8 300 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 H7BYZ3 331 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 M0R3E3 92 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 CT45A10P0DMU9 189 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 ZNF493Q6ZR52 646 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 FAM19A4Q96LR4 140 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 AQP10Q96PS8 301 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 PAXXQ9BUH6 204 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 WFDC1Q9HC57 220 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 VPS13DQ5THJ4 4388 aa10.98□□□□□ -0.65
CCDC90B-215ENST00000529745 GIPP09681 153 aaPredicted RBP10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 AZU1P20160 251 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 LEPP41159 167 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 FFAR4Q5NUL3 377 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 GFI1BQ5VTD9 330 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 C9orf47Q6ZRZ4 202 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 RNASE8Q8TDE3 154 aaKnown RBP10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 RNF141Q8WVD5 230 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 ZNF503Q96F45 646 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 C16orf74Q96GX8 76 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 LINC01587Q99440 93 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 SMIM3Q9BZL3 60 aa10.97□□□□□ -0.65
CCDC90B-215ENST00000529745 NMBP08949 121 aa10.96□□□□□ -0.65
CCDC90B-215ENST00000529745 PRB4P10163 310 aaPredicted RBP10.96□□□□□ -0.65
CCDC90B-215ENST00000529745 DAD1P61803 113 aa10.96□□□□□ -0.65
CCDC90B-215ENST00000529745 KIR3DS1Q14943 382 aa10.96□□□□□ -0.65
CCDC90B-215ENST00000529745 EXOC3-AS1Q8N2X6 119 aa10.96□□□□□ -0.65
CCDC90B-215ENST00000529745 TMEM263Q8WUH6 116 aaKnown RBP10.96□□□□□ -0.65
CCDC90B-215ENST00000529745 BLNKQ8WV28 456 aa10.96□□□□□ -0.65
CCDC90B-215ENST00000529745 NDUFAF3Q9BU61 184 aa10.96□□□□□ -0.65
CCDC90B-215ENST00000529745 DNAH6Q9C0G6 4158 aa10.95□□□□□ -0.66
CCDC90B-215ENST00000529745 TRBV7-9A0A0J9YWB2 115 aa10.95□□□□□ -0.66
CCDC90B-215ENST00000529745 KLLNB2CW77 178 aa10.95□□□□□ -0.66
CCDC90B-215ENST00000529745 PRM2P04554 102 aa10.95□□□□□ -0.66
CCDC90B-215ENST00000529745 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-215ENST00000529745 CRISP2P16562 243 aa10.95□□□□□ -0.66
CCDC90B-215ENST00000529745 M6PRP20645 277 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms