RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 DLX6P56179 175 aa11.52□□□□□ -0.57
CAPN1-214ENST00000528165 C22orf34Q6ZV56 151 aa11.52□□□□□ -0.57
CAPN1-214ENST00000528165 ZNF491Q8N8L2 437 aa11.52□□□□□ -0.57
CAPN1-214ENST00000528165 SPANXB1Q9NS25 103 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-214ENST00000528165 MRPS12O15235 138 aaKnown RBP11.51□□□□□ -0.57
CAPN1-214ENST00000528165 TMEM155Q4W5P6 130 aa11.51□□□□□ -0.57
CAPN1-214ENST00000528165 GTSCR1Q86UQ5 136 aa11.51□□□□□ -0.57
CAPN1-214ENST00000528165 TM2D2Q9BX73 214 aa11.51□□□□□ -0.57
CAPN1-214ENST00000528165 TECTAO75443 2155 aa11.51□□□□□ -0.57
CAPN1-214ENST00000528165 EGR2P11161 476 aaPredicted RBP11.51□□□□□ -0.57
CAPN1-214ENST00000528165 FAM27E3Q08E93 113 aa11.51□□□□□ -0.57
CAPN1-214ENST00000528165 PDE6HQ13956 83 aa11.51□□□□□ -0.57
CAPN1-214ENST00000528165 WFDC2Q14508 124 aa11.51□□□□□ -0.57
CAPN1-214ENST00000528165 E9PLD3 99 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 CEACAM4O75871 244 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 EVI2AP22794 236 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 IGFL2Q6UWQ7 119 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 ASCL5Q7RTU5 278 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 NUP37Q8NFH4 326 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 WDFY4Q6ZS81 3184 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 IGKV2-40A0A087WW87 121 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-214ENST00000528165 A0A1W2PRD5 423 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 A0A1W2PRF3 423 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 A0A1W2PRM7 423 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 K7EIM0 57 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 IGKV2D-40P01614 121 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-214ENST00000528165 SRSF6Q13247 344 aaKnown RBP11.5□□□□□ -0.57
CAPN1-214ENST00000528165 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 FOXI2Q6ZQN5 318 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 S100A7AQ86SG5 101 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 ZNF479Q96JC4 524 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 FOXC2Q99958 501 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
CAPN1-214ENST00000528165 SMPXQ9UHP9 88 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 IGHV1-3A0A0C4DH29 117 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 IGLL5B9A064 214 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 DPM2O94777 84 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 CNIH1O95406 144 aa11.5□□□□□ -0.57
CAPN1-214ENST00000528165 BMI1P35226 326 aa11.49□□□□□ -0.57
CAPN1-214ENST00000528165 PRR25Q96S07 402 aa11.49□□□□□ -0.57
CAPN1-214ENST00000528165 ATP6V0BQ99437 205 aa11.49□□□□□ -0.57
CAPN1-214ENST00000528165 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
CAPN1-214ENST00000528165 K7EMI3 77 aa11.49□□□□□ -0.57
CAPN1-214ENST00000528165 SRSF1Q07955 248 aaKnown RBP eCLIP11.49□□□□□ -0.57
CAPN1-214ENST00000528165 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
CAPN1-214ENST00000528165 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-214ENST00000528165 PRSS33Q8NF86 280 aa11.49□□□□□ -0.57
CAPN1-214ENST00000528165 FAM215AQ9Y5M1 114 aa11.49□□□□□ -0.57
CAPN1-214ENST00000528165 MALRD1Q5VYJ5 2156 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 VSTM5A8MXK1 200 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 ATP5LO75964 103 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 IGLC6P0CF74 106 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 DLX1P56177 255 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 PRB3Q04118 309 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-214ENST00000528165 ADIPOQQ15848 244 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 TMEM108Q6UXF1 575 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 RNF185Q96GF1 192 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 MSRB1Q9NZV6 116 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 NCOR1O75376 2440 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 TMEM8BA6NDV4 472 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 LINC01546A6NGU7 62 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 H3BMG7 143 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 ETDBQ3ZM63 59 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 SPATA25Q9BR10 227 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 ZFHX4Q86UP3 3567 aa11.48□□□□□ -0.57
CAPN1-214ENST00000528165 COX8CQ7Z4L0 72 aa11.47□□□□□ -0.57
CAPN1-214ENST00000528165 SH2D6Q7Z4S9 175 aa11.47□□□□□ -0.57
CAPN1-214ENST00000528165 Q8TAT8 98 aa11.47□□□□□ -0.57
CAPN1-214ENST00000528165 ARPC1AQ92747 370 aa11.47□□□□□ -0.57
CAPN1-214ENST00000528165 TMEM160Q9NX00 188 aa11.47□□□□□ -0.57
CAPN1-214ENST00000528165 ROS1P08922 2347 aa11.47□□□□□ -0.57
CAPN1-214ENST00000528165 TNFRSF13BO14836 293 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-214ENST00000528165 GAS8-AS1O95177 125 aa11.47□□□□□ -0.57
CAPN1-214ENST00000528165 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
CAPN1-214ENST00000528165 ORM1P02763 201 aa11.46□□□□□ -0.57
CAPN1-214ENST00000528165 HLA-DRB4P13762 266 aa11.46□□□□□ -0.57
CAPN1-214ENST00000528165 SPAG8Q99932 426 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-214ENST00000528165 S4R3C0 116 aa11.46□□□□□ -0.57
CAPN1-214ENST00000528165 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.57
CAPN1-214ENST00000528165 TRIOBPQ9H2D6 2365 aa11.46□□□□□ -0.57
CAPN1-214ENST00000528165 CDX4O14627 284 aaPredicted RBP11.46□□□□□ -0.58
CAPN1-214ENST00000528165 ZNF80P51504 273 aaPredicted RBP11.46□□□□□ -0.58
CAPN1-214ENST00000528165 CCDC144NLQ6NUI1 221 aa11.46□□□□□ -0.58
CAPN1-214ENST00000528165 SRSF8Q9BRL6 282 aaKnown RBP11.46□□□□□ -0.58
CAPN1-214ENST00000528165 LOC400499M0QZD8 3231 aa11.46□□□□□ -0.58
CAPN1-214ENST00000528165 TRAV40A0A0B4J280 105 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 BUB1B-PAK6H3BSN5 160 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 IGLV1-47P01700 117 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 TAL2Q16559 108 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 RPEQ96AT9 228 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 TNRC18O15417 2968 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-214ENST00000528165 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 AMTNQ6UX39 209 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 TTC9CQ8N5M4 171 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 RAB1BQ9H0U4 201 aa11.45□□□□□ -0.58
CAPN1-214ENST00000528165 RP1L1Q8IWN7 2480 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-214ENST00000528165 HIST1H4GQ99525 98 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 745.1 ms