RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 MPDU1O75352 247 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 AZU1P20160 251 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 DEFA1P59665 94 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 DEFA3P59666 94 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 CYCSP99999 105 aaKnown RBP13.18□□□□□ -0.3
CAPN1-203ENST00000525013 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 CHAC2Q8WUX2 184 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 SAT2Q96F10 170 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-203ENST00000525013 FAM210BQ96KR6 192 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 DNAH6Q9C0G6 4158 aa13.18□□□□□ -0.3
CAPN1-203ENST00000525013 DNAH10Q8IVF4 4471 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 LYRM9A8MSI8 78 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 DEFB130BP0DP73 79 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 DEFB130AP0DP74 79 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 TSPOP30536 169 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 CLINT1Q14677 625 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 POM121L12Q8N7R1 296 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 MARVELD1Q9BSK0 173 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-203ENST00000525013 ZNF586Q9NXT0 402 aa13.17□□□□□ -0.3
CAPN1-203ENST00000525013 H0YIZ8 118 aa13.16□□□□□ -0.3
CAPN1-203ENST00000525013 SSNA1O43805 119 aa13.16□□□□□ -0.3
CAPN1-203ENST00000525013 TAS2R60P59551 318 aa13.16□□□□□ -0.3
CAPN1-203ENST00000525013 GCSAMLQ5JQS6 135 aa13.16□□□□□ -0.3
CAPN1-203ENST00000525013 KIR3DS1Q14943 382 aa13.15□□□□□ -0.3
CAPN1-203ENST00000525013 FCN2Q15485 313 aa13.15□□□□□ -0.3
CAPN1-203ENST00000525013 UBE2DNLQ8IWF7 75 aa13.15□□□□□ -0.3
CAPN1-203ENST00000525013 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.3
CAPN1-203ENST00000525013 TRBV19A0A075B6N1 114 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 J3KRW8 73 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 PYYP10082 97 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 H2BFSP57053 126 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 TMEM88Q6PEY1 159 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 BLNKQ8WV28 456 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 PPP1R1CQ8WVI7 109 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 C16orf74Q96GX8 76 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
CAPN1-203ENST00000525013 PLAC8L1A1L4L8 177 aa13.13□□□□□ -0.31
CAPN1-203ENST00000525013 H7BYZ3 331 aa13.13□□□□□ -0.31
CAPN1-203ENST00000525013 ZNF253O75346 499 aa13.13□□□□□ -0.31
CAPN1-203ENST00000525013 CT45A10P0DMU9 189 aa13.13□□□□□ -0.31
CAPN1-203ENST00000525013 HIST1H1EP10412 219 aaKnown RBP13.13□□□□□ -0.31
CAPN1-203ENST00000525013 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
CAPN1-203ENST00000525013 M0R3E3 92 aa13.12□□□□□ -0.31
CAPN1-203ENST00000525013 LEPP41159 167 aa13.12□□□□□ -0.31
CAPN1-203ENST00000525013 ZNF493Q6ZR52 646 aa13.12□□□□□ -0.31
CAPN1-203ENST00000525013 C20orf144Q9BQM9 153 aa13.12□□□□□ -0.31
CAPN1-203ENST00000525013 BATF3Q9NR55 127 aa13.12□□□□□ -0.31
CAPN1-203ENST00000525013 KCNIP2Q9NS61 270 aa13.12□□□□□ -0.31
CAPN1-203ENST00000525013 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-203ENST00000525013 NPIPB6E9PJ23 425 aa13.11□□□□□ -0.31
CAPN1-203ENST00000525013 F5H768 121 aa13.11□□□□□ -0.31
CAPN1-203ENST00000525013 M0R2N4 97 aa13.11□□□□□ -0.31
CAPN1-203ENST00000525013 NDUFB4O95168 129 aa13.11□□□□□ -0.31
CAPN1-203ENST00000525013 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
CAPN1-203ENST00000525013 CCDC28AQ8IWP9 274 aa13.11□□□□□ -0.31
CAPN1-203ENST00000525013 TMEM263Q8WUH6 116 aaKnown RBP13.11□□□□□ -0.31
CAPN1-203ENST00000525013 MRPL53Q96EL3 112 aaKnown RBP13.11□□□□□ -0.31
CAPN1-203ENST00000525013 SLC25A2Q9BXI2 301 aa13.11□□□□□ -0.31
CAPN1-203ENST00000525013 WDR61Q9GZS3 305 aaKnown RBP13.11□□□□□ -0.31
CAPN1-203ENST00000525013 NOP10Q9NPE3 64 aaKnown RBP13.11□□□□□ -0.31
CAPN1-203ENST00000525013 PRELID1Q9Y255 219 aa13.11□□□□□ -0.31
CAPN1-203ENST00000525013 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
CAPN1-203ENST00000525013 MPC2O95563 127 aa13.1□□□□□ -0.31
CAPN1-203ENST00000525013 PET100P0DJ07 73 aa13.1□□□□□ -0.31
CAPN1-203ENST00000525013 PDE6HQ13956 83 aa13.1□□□□□ -0.31
CAPN1-203ENST00000525013 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
CAPN1-203ENST00000525013 ODF3Q96PU9 254 aa13.1□□□□□ -0.31
CAPN1-203ENST00000525013 AAMDCQ9H7C9 122 aa13.1□□□□□ -0.31
CAPN1-203ENST00000525013 C17orf112F2Z3M2 114 aa13.09□□□□□ -0.31
CAPN1-203ENST00000525013 ATP5G1P05496 136 aa13.09□□□□□ -0.31
CAPN1-203ENST00000525013 ATP5G3P48201 142 aa13.09□□□□□ -0.31
CAPN1-203ENST00000525013 ERCC8Q13216 396 aa13.09□□□□□ -0.31
CAPN1-203ENST00000525013 RNASE8Q8TDE3 154 aaKnown RBP13.09□□□□□ -0.31
CAPN1-203ENST00000525013 FAM167A-AS1Q96KT0 104 aa13.09□□□□□ -0.31
CAPN1-203ENST00000525013 ATP5SQ99766 215 aa13.09□□□□□ -0.31
CAPN1-203ENST00000525013 NACAE9PAV3 2078 aa13.09□□□□□ -0.31
CAPN1-203ENST00000525013 CBY3A6NI87 242 aa13.08□□□□□ -0.32
CAPN1-203ENST00000525013 NBEAP1P0C6P0 100 aa13.08□□□□□ -0.32
CAPN1-203ENST00000525013 ICAM4Q14773 271 aa13.08□□□□□ -0.32
CAPN1-203ENST00000525013 C15orf53Q8NAA6 179 aa13.08□□□□□ -0.32
CAPN1-203ENST00000525013 MRPL32Q9BYC8 188 aaKnown RBP13.08□□□□□ -0.32
CAPN1-203ENST00000525013 SMIM3Q9BZL3 60 aa13.08□□□□□ -0.32
CAPN1-203ENST00000525013 OR51M1Q9H341 326 aa13.08□□□□□ -0.32
CAPN1-203ENST00000525013 HSPB11Q9Y547 144 aa13.08□□□□□ -0.32
CAPN1-203ENST00000525013 IGLV2-18A0A075B6J9 118 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 OR10J4P0C629 311 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 RPL12P30050 165 aaKnown RBP13.07□□□□□ -0.32
CAPN1-203ENST00000525013 RNF212Q495C1 297 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 FAM122CQ6P4D5 195 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 LINC00477Q96M19 166 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 PAXXQ9BUH6 204 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 AGPAT4-IT1Q9H0P7 198 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 MBD2Q9UBB5 411 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 FUT9Q9Y231 359 aa13.07□□□□□ -0.32
CAPN1-203ENST00000525013 SNURFLB1AK76 121 aa13.06□□□□□ -0.32
CAPN1-203ENST00000525013 IFNA5P01569 189 aa13.06□□□□□ -0.32
CAPN1-203ENST00000525013 SLC25A5P05141 298 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms