RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 MAP1LC3CQ9BXW4 147 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 TMEM191AQ9H0A3 160 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 COX11Q9Y6N1 276 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 SETXQ7Z333 2677 aaKnown RBP6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 FLNBO75369 2602 aaKnown RBP6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 H3BRN7 92 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 CCL21O00585 134 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 MRPS12O15235 138 aaKnown RBP6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 NCR2O95944 276 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 HLA-DRB1P01911 266 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 APOBEC3AP31941 199 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 ZNF491Q8N8L2 437 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 CLUHP3Q96NS8 147 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 SCNM1Q9BWG6 230 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 VPS13CQ709C8 3753 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 IGHV3-49A0A0A0MS15 119 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 IGHV3-66A0A0C4DH42 116 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 LOXL1Q08397 574 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 ORAOV1Q8WV07 137 aa6.3□□□□□ -1.4
TNFRSF10B-208ENST00000523752 A0A1B0GUT8 65 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 ORM1P02763 201 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 UQCRFS1P47985 274 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 ECSCRQ19T08 205 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 FAM162BQ5T6X4 162 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 IGFL4Q6B9Z1 124 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 NEU4Q8WWR8 484 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 PSG8Q9UQ74 426 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 CENPEQ02224 2701 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 FAM231BA6NCW3 169 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 NUDT3O95989 172 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 RNASE8Q8TDE3 154 aaKnown RBP6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 RNF125Q96EQ8 232 aa6.29□□□□□ -1.4
TNFRSF10B-208ENST00000523752 IGKV3-7A0A075B6H7 116 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 B9A039 149 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 NDPQ00604 133 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 RIGQ13278 110 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 PSG3Q16557 428 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 TMEM75Q8N9X5 138 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 ZNF414Q96IQ9 312 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 HIF1ANQ9NWT6 349 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 LOC105371242A0A075B767 164 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 TMEM213A2RRL7 107 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 F8W735 103 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 LIPFP07098 398 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 RPL11P62913 178 aaKnown RBP6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 CDSNQ15517 529 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 CFHR4Q92496 578 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 ST20Q9HBF5 79 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 SCRT2Q9NQ03 307 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 C1RLQ9NZP8 487 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 A0A096LNJ9 63 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 SCGB2A1O75556 95 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 CDKN1BP46527 198 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 ZNF672Q499Z4 452 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 ZNF738Q8NE65 137 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 AP5S1Q9NUS5 200 aa6.28□□□□□ -1.4
TNFRSF10B-208ENST00000523752 IGKV2-40A0A087WW87 121 aaPredicted RBP6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 A0A087X0K7 114 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 TMEM8BA6NDV4 472 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 IGKV2D-40P01614 121 aaPredicted RBP6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 CEACAM3P40198 252 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 IFI27P40305 119 aaPredicted RBP6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 UBE2V1Q13404 147 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 S100A7AQ86SG5 101 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 PIP4P2Q8N4L2 257 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 FANCD2OSQ96PS1 177 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 TMEM189A5PLL7 270 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 OR2T8A6NH00 312 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 TMEM238C9JI98 176 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 NBR2O15453 112 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 ZNF207O43670 478 aaKnown RBP6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 TWIST1Q15672 202 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 BVES-AS1Q5T3Y7 98 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 SLC25A34Q6PIV7 304 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 DYNAPQ8N1N2 210 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 Q8TAT8 98 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 C18orf15Q96N68 181 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 RAB1BQ9H0U4 201 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 SORL1Q92673 2214 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 TRBV6-1A0A0K0K1D8 114 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 WI2-2373I1.2A0A1W2PRP0 233 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 D6R8Y8 96 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 PPIFP30405 207 aaKnown RBP6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 AMN1Q8IY45 258 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 VPS25Q9BRG1 176 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 HSPB8Q9UJY1 196 aa6.27□□□□□ -1.41
TNFRSF10B-208ENST00000523752 TAX1BP3O14907 124 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 HLA-DMBP28068 263 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 NMUP48645 174 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 RBX1P62877 108 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 LYZL1Q6UWQ5 148 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 ZNF747Q9BV97 191 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 SH2D1AO60880 128 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 CKS2P33552 79 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 PET117Q6UWS5 81 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 DPM3Q9P2X0 92 aa6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 GCN1Q92616 2671 aaKnown RBP6.26□□□□□ -1.41
TNFRSF10B-208ENST00000523752 IGHV3OR16-10A0A075B7F0 116 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms