RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-222	ENST00000520948		A0A0J9YX75	114 aa		13.29	□□□□□ -0.28
VEGFA-222	ENST00000520948		A8MTW9	85 aa		13.29	□□□□□ -0.28
VEGFA-222	ENST00000520948	OR7C2	O60412	319 aa		13.29	□□□□□ -0.28
VEGFA-222	ENST00000520948	OR10J4	P0C629	311 aa		13.29	□□□□□ -0.28
VEGFA-222	ENST00000520948	EIF5A	P63241	154 aa	Known RBP	13.29	□□□□□ -0.28
VEGFA-222	ENST00000520948	ZNF726P1	Q15940	193 aa		13.29	□□□□□ -0.28
VEGFA-222	ENST00000520948	PQLC2	Q6ZP29	291 aa		13.29	□□□□□ -0.28
VEGFA-222	ENST00000520948	SSX7	Q7RTT5	188 aa		13.29	□□□□□ -0.28
VEGFA-222	ENST00000520948		F6UB75	175 aa		13.28	□□□□□ -0.28
VEGFA-222	ENST00000520948	APOC4	P55056	127 aa		13.28	□□□□□ -0.28
VEGFA-222	ENST00000520948	SUN5	Q8TC36	379 aa		13.28	□□□□□ -0.28
VEGFA-222	ENST00000520948	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.28	□□□□□ -0.28
VEGFA-222	ENST00000520948	CSTL1	Q9H114	145 aa		13.28	□□□□□ -0.28
VEGFA-222	ENST00000520948	UBE2C	O00762	179 aa		13.27	□□□□□ -0.29
VEGFA-222	ENST00000520948	GIG44	P09565	113 aa	Predicted RBP	13.27	□□□□□ -0.29
VEGFA-222	ENST00000520948	TPT1	P13693	172 aa	Known RBP	13.27	□□□□□ -0.29
VEGFA-222	ENST00000520948	PSG9	Q00887	426 aa		13.27	□□□□□ -0.29
VEGFA-222	ENST00000520948	AKR1C8P	Q5T2L2	129 aa		13.27	□□□□□ -0.29
VEGFA-222	ENST00000520948	BLNK	Q8WV28	456 aa		13.27	□□□□□ -0.29
VEGFA-222	ENST00000520948	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.26	□□□□□ -0.29
VEGFA-222	ENST00000520948	HMGB3	O15347	200 aa	Known RBP	13.26	□□□□□ -0.29
VEGFA-222	ENST00000520948	EBLN2	Q6P2I7	272 aa		13.26	□□□□□ -0.29
VEGFA-222	ENST00000520948	LYPD1	Q8N2G4	141 aa		13.26	□□□□□ -0.29
VEGFA-222	ENST00000520948	ZNF738	Q8NE65	137 aa		13.26	□□□□□ -0.29
VEGFA-222	ENST00000520948	RPUSD4	Q96CM3	377 aa	Known RBP	13.26	□□□□□ -0.29
VEGFA-222	ENST00000520948	MRPL53	Q96EL3	112 aa	Known RBP	13.26	□□□□□ -0.29
VEGFA-222	ENST00000520948	CTXND1	A0A1B0GTU2	59 aa		13.25	□□□□□ -0.29
VEGFA-222	ENST00000520948	ARL14EPL	P0DKL9	152 aa		13.25	□□□□□ -0.29
VEGFA-222	ENST00000520948	UBE2L3	P68036	154 aa	Known RBP	13.25	□□□□□ -0.29
VEGFA-222	ENST00000520948	MORN3	Q6PF18	240 aa	Predicted RBP	13.25	□□□□□ -0.29
VEGFA-222	ENST00000520948		Q6ZWC4	215 aa		13.25	□□□□□ -0.29
VEGFA-222	ENST00000520948	SLC51B	Q86UW2	128 aa		13.25	□□□□□ -0.29
VEGFA-222	ENST00000520948	PHYHIPL	Q96FC7	376 aa		13.25	□□□□□ -0.29
VEGFA-222	ENST00000520948	PRELID1	Q9Y255	219 aa		13.25	□□□□□ -0.29
VEGFA-222	ENST00000520948	UMAD1	C9J7I0	102 aa		13.24	□□□□□ -0.29
VEGFA-222	ENST00000520948	PRAC2	D3DTV9	90 aa		13.24	□□□□□ -0.29
VEGFA-222	ENST00000520948	AMTN	Q6UX39	209 aa		13.24	□□□□□ -0.29
VEGFA-222	ENST00000520948	EXOC3-AS1	Q8N2X6	119 aa		13.24	□□□□□ -0.29
VEGFA-222	ENST00000520948	OR8A1	Q8NGG7	326 aa		13.24	□□□□□ -0.29
VEGFA-222	ENST00000520948		M0R3E3	92 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	DUSP14	O95147	198 aa	Known RBP	13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	CXorf1	O96002	111 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	ZNF705D	P0CH99	300 aa	Predicted RBP	13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	ZNF705B	P0CI00	300 aa	Predicted RBP	13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	GCHFR	P30047	84 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	FHIT	P49789	147 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	NKX2-5	P52952	324 aa	Predicted RBP	13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	ICAM4	Q14773	271 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	IL17D	Q8TAD2	202 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	TMED6	Q8WW62	240 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	OVOL2	Q9BRP0	275 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	TP53TG1	Q9Y2A0	90 aa		13.23	□□□□□ -0.29
VEGFA-222	ENST00000520948	PRB4	P10163	310 aa	Predicted RBP	13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	C4BPB	P20851	252 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	CNN1	P51911	297 aa	Known RBP	13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	RAN	P62826	216 aa	Known RBP	13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	DPPA3	Q6W0C5	159 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	CSNK1G2-AS1	Q8NCQ2	148 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	OR4B1	Q8NGF8	309 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	MBD3L1	Q8WWY6	194 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	RNF183	Q96D59	192 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948		Q9H3A6	140 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	AAMDC	Q9H7C9	122 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	ALMS1	Q8TCU4	4167 aa		13.22	□□□□□ -0.29
VEGFA-222	ENST00000520948	CA1	P00915	261 aa	Predicted RBP	13.21	□□□□□ -0.29
VEGFA-222	ENST00000520948	IGKV3-20	P01619	116 aa		13.21	□□□□□ -0.29
VEGFA-222	ENST00000520948	PLEC	Q15149	4684 aa	Known RBP	13.21	□□□□□ -0.3
VEGFA-222	ENST00000520948	NUTF2	P61970	127 aa	Known RBP	13.2	□□□□□ -0.3
VEGFA-222	ENST00000520948	EIF5AL1	Q6IS14	154 aa	Known RBP	13.2	□□□□□ -0.3
VEGFA-222	ENST00000520948	SLC35B3	Q9H1N7	401 aa		13.2	□□□□□ -0.3
VEGFA-222	ENST00000520948	TMEM167B	Q9NRX6	74 aa		13.2	□□□□□ -0.3
VEGFA-222	ENST00000520948	NPIPB6	E9PJ23	425 aa		13.19	□□□□□ -0.3
VEGFA-222	ENST00000520948	SPRY2	O43597	315 aa		13.19	□□□□□ -0.3
VEGFA-222	ENST00000520948	HIST1H1A	Q02539	215 aa	Predicted RBP	13.19	□□□□□ -0.3
VEGFA-222	ENST00000520948	DEFB135	Q30KP9	77 aa		13.19	□□□□□ -0.3
VEGFA-222	ENST00000520948	ARL6IP6	Q8N6S5	226 aa		13.19	□□□□□ -0.3
VEGFA-222	ENST00000520948	TMPRSS5	Q9H3S3	457 aa		13.19	□□□□□ -0.3
VEGFA-222	ENST00000520948	OTOR	Q9NRC9	128 aa		13.19	□□□□□ -0.3
VEGFA-222	ENST00000520948	BOLA1	Q9Y3E2	137 aa		13.19	□□□□□ -0.3
VEGFA-222	ENST00000520948	MAP1LC3B2	A6NCE7	125 aa		13.18	□□□□□ -0.3
VEGFA-222	ENST00000520948	PGP	A6NDG6	321 aa		13.18	□□□□□ -0.3
VEGFA-222	ENST00000520948	SULT1A2	P50226	295 aa		13.18	□□□□□ -0.3
VEGFA-222	ENST00000520948	RAB5C	P51148	216 aa		13.18	□□□□□ -0.3
VEGFA-222	ENST00000520948	FGF8	P55075	233 aa	Predicted RBP	13.18	□□□□□ -0.3
VEGFA-222	ENST00000520948	FAM213B	Q8TBF2	198 aa		13.18	□□□□□ -0.3
VEGFA-222	ENST00000520948	C1QTNF4	Q9BXJ3	329 aa		13.18	□□□□□ -0.3
VEGFA-222	ENST00000520948	MAP1LC3B	Q9GZQ8	125 aa		13.18	□□□□□ -0.3
VEGFA-222	ENST00000520948	FXYD7	P58549	80 aa		13.17	□□□□□ -0.3
VEGFA-222	ENST00000520948	C9orf47	Q6ZRZ4	202 aa		13.17	□□□□□ -0.3
VEGFA-222	ENST00000520948	OR10J6P	Q8NGY7	276 aa		13.17	□□□□□ -0.3
VEGFA-222	ENST00000520948	RXFP4	Q8TDU9	374 aa		13.17	□□□□□ -0.3
VEGFA-222	ENST00000520948	XCL2	Q9UBD3	114 aa		13.17	□□□□□ -0.3
VEGFA-222	ENST00000520948		A0A1W2PRE2	83 aa		13.16	□□□□□ -0.3
VEGFA-222	ENST00000520948	CRX	O43186	299 aa	Predicted RBP	13.16	□□□□□ -0.3
VEGFA-222	ENST00000520948	CT45A10	P0DMU9	189 aa		13.16	□□□□□ -0.3
VEGFA-222	ENST00000520948	LINC00477	Q96M19	166 aa		13.16	□□□□□ -0.3
VEGFA-222	ENST00000520948	AGPAT4-IT1	Q9H0P7	198 aa		13.16	□□□□□ -0.3
VEGFA-222	ENST00000520948	RBAKDN	A6NC62	111 aa		13.15	□□□□□ -0.3
VEGFA-222	ENST00000520948	DIRC3	C9JPN6	131 aa		13.15	□□□□□ -0.3
VEGFA-222	ENST00000520948	SLC25A5	P05141	298 aa	Known RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms