RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 RPL12P30050 165 aaKnown RBP17.59■□□□□ 0.41
PVT1-204ENST00000517525 CDKN1BP46527 198 aa17.59■□□□□ 0.41
PVT1-204ENST00000517525 FAM167A-AS1Q96KT0 104 aa17.59■□□□□ 0.41
PVT1-204ENST00000517525 TMEM208Q9BTX3 173 aa17.59■□□□□ 0.41
PVT1-204ENST00000517525 PARD6GQ9BYG4 376 aaPredicted RBP17.59■□□□□ 0.41
PVT1-204ENST00000517525 MBD2Q9UBB5 411 aa17.59■□□□□ 0.41
PVT1-204ENST00000517525 DEFB131BA0A096LNP1 70 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 PRAC2D3DTV9 90 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 C17orf112F2Z3M2 114 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 BAP18Q8IXM2 172 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 OR10J6PQ8NGY7 276 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 ODF3Q96PU9 254 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 C20orf144Q9BQM9 153 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 MRPL32Q9BYC8 188 aaKnown RBP17.58■□□□□ 0.4
PVT1-204ENST00000517525 PPP1R14DQ9NXH3 145 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 PRELID1Q9Y255 219 aa17.58■□□□□ 0.4
PVT1-204ENST00000517525 NDUFB4O95168 129 aa17.57■□□□□ 0.4
PVT1-204ENST00000517525 EMP1P54849 157 aa17.57■□□□□ 0.4
PVT1-204ENST00000517525 FAM222AQ5U5X8 452 aa17.57■□□□□ 0.4
PVT1-204ENST00000517525 SLC25A2Q9BXI2 301 aa17.57■□□□□ 0.4
PVT1-204ENST00000517525 YTHDF2Q9Y5A9 579 aaKnown RBP17.57■□□□□ 0.4
PVT1-204ENST00000517525 NIPSNAP3BQ9BS92 247 aa17.56■□□□□ 0.4
PVT1-204ENST00000517525 IGHV4-4A0A075B6R2 117 aa17.55■□□□□ 0.4
PVT1-204ENST00000517525 TRAV12-2A0A075B6T6 113 aa17.55■□□□□ 0.4
PVT1-204ENST00000517525 NPIPB6E9PJ23 425 aa17.55■□□□□ 0.4
PVT1-204ENST00000517525 TAS2R60P59551 318 aa17.55■□□□□ 0.4
PVT1-204ENST00000517525 ZNF767PQ75MW2 155 aa17.55■□□□□ 0.4
PVT1-204ENST00000517525 FAM210BQ96KR6 192 aa17.55■□□□□ 0.4
PVT1-204ENST00000517525 IFNA5P01569 189 aa17.54■□□□□ 0.4
PVT1-204ENST00000517525 PYYP10082 97 aa17.54■□□□□ 0.4
PVT1-204ENST00000517525 MIR17HGQ75NE6 70 aa17.54■□□□□ 0.4
PVT1-204ENST00000517525 RPP25LQ8N5L8 163 aaKnown RBP17.54■□□□□ 0.4
PVT1-204ENST00000517525 ASB13Q8WXK3 278 aa17.54■□□□□ 0.4
PVT1-204ENST00000517525 FUT9Q9Y231 359 aa17.54■□□□□ 0.4
PVT1-204ENST00000517525 LYRM9A8MSI8 78 aa17.53■□□□□ 0.4
PVT1-204ENST00000517525 ZNF705GA8MUZ8 300 aaPredicted RBP17.53■□□□□ 0.4
PVT1-204ENST00000517525 SCGB1C1Q8TD33 95 aa17.53■□□□□ 0.4
PVT1-204ENST00000517525 MED28Q9H204 178 aa17.53■□□□□ 0.4
PVT1-204ENST00000517525 OR51M1Q9H341 326 aa17.53■□□□□ 0.4
PVT1-204ENST00000517525 TIMM9Q9Y5J7 89 aa17.53■□□□□ 0.4
PVT1-204ENST00000517525 NBEAP1P0C6P0 100 aa17.52■□□□□ 0.4
PVT1-204ENST00000517525 LINC01587Q99440 93 aa17.52■□□□□ 0.4
PVT1-204ENST00000517525 EPPK1P58107 5090 aaKnown RBP17.52■□□□□ 0.39
PVT1-204ENST00000517525 PLAC8L1A1L4L8 177 aa17.51■□□□□ 0.39
PVT1-204ENST00000517525 H7BYZ3 331 aa17.51■□□□□ 0.39
PVT1-204ENST00000517525 CT45A10P0DMU9 189 aa17.51■□□□□ 0.39
PVT1-204ENST00000517525 KMT2AQ03164 3969 aa17.51■□□□□ 0.39
PVT1-204ENST00000517525 FCN2Q15485 313 aa17.51■□□□□ 0.39
PVT1-204ENST00000517525 ZNF493Q6ZR52 646 aa17.51■□□□□ 0.39
PVT1-204ENST00000517525 WFDC1Q9HC57 220 aa17.51■□□□□ 0.39
PVT1-204ENST00000517525 M0R3E3 92 aa17.5■□□□□ 0.39
PVT1-204ENST00000517525 PRB4P10163 310 aaPredicted RBP17.5■□□□□ 0.39
PVT1-204ENST00000517525 LEPP41159 167 aa17.5■□□□□ 0.39
PVT1-204ENST00000517525 FXYD5Q96DB9 178 aa17.5■□□□□ 0.39
PVT1-204ENST00000517525 LINC00477Q96M19 166 aa17.5■□□□□ 0.39
PVT1-204ENST00000517525 PAXXQ9BUH6 204 aa17.5■□□□□ 0.39
PVT1-204ENST00000517525 AAMDCQ9H7C9 122 aa17.5■□□□□ 0.39
PVT1-204ENST00000517525 PRM2P04554 102 aa17.49■□□□□ 0.39
PVT1-204ENST00000517525 AZU1P20160 251 aa17.49■□□□□ 0.39
PVT1-204ENST00000517525 FFAR4Q5NUL3 377 aa17.49■□□□□ 0.39
PVT1-204ENST00000517525 RNF141Q8WVD5 230 aa17.49■□□□□ 0.39
PVT1-204ENST00000517525 NDUFAF3Q9BU61 184 aa17.49■□□□□ 0.39
PVT1-204ENST00000517525 SMIM3Q9BZL3 60 aa17.49■□□□□ 0.39
PVT1-204ENST00000517525 GFI1BQ5VTD9 330 aa17.48■□□□□ 0.39
PVT1-204ENST00000517525 C9orf47Q6ZRZ4 202 aa17.48■□□□□ 0.39
PVT1-204ENST00000517525 BLNKQ8WV28 456 aa17.48■□□□□ 0.39
PVT1-204ENST00000517525 C16orf74Q96GX8 76 aa17.48■□□□□ 0.39
PVT1-204ENST00000517525 FAM19A4Q96LR4 140 aa17.48■□□□□ 0.39
PVT1-204ENST00000517525 AQP10Q96PS8 301 aa17.48■□□□□ 0.39
PVT1-204ENST00000517525 PLA2G2EQ9NZK7 142 aa17.48■□□□□ 0.39
PVT1-204ENST00000517525 VPS13DQ5THJ4 4388 aa17.47■□□□□ 0.39
PVT1-204ENST00000517525 GIPP09681 153 aaPredicted RBP17.47■□□□□ 0.39
PVT1-204ENST00000517525 DAD1P61803 113 aa17.47■□□□□ 0.39
PVT1-204ENST00000517525 KIR3DS1Q14943 382 aa17.47■□□□□ 0.39
PVT1-204ENST00000517525 LYPD1Q8N2G4 141 aa17.47■□□□□ 0.39
PVT1-204ENST00000517525 EXOC3-AS1Q8N2X6 119 aa17.47■□□□□ 0.39
PVT1-204ENST00000517525 ZNF503Q96F45 646 aa17.47■□□□□ 0.39
PVT1-204ENST00000517525 NMBP08949 121 aa17.46■□□□□ 0.39
PVT1-204ENST00000517525 RNASE8Q8TDE3 154 aaKnown RBP17.46■□□□□ 0.39
PVT1-204ENST00000517525 TMEM263Q8WUH6 116 aaKnown RBP17.46■□□□□ 0.39
PVT1-204ENST00000517525 AGPAT4-IT1Q9H0P7 198 aa17.46■□□□□ 0.39
PVT1-204ENST00000517525 BIRC6Q9NR09 4857 aa17.45■□□□□ 0.38
PVT1-204ENST00000517525 SLC25A5P05141 298 aaKnown RBP17.45■□□□□ 0.38
PVT1-204ENST00000517525 TAS2R45P59539 299 aa17.45■□□□□ 0.38
PVT1-204ENST00000517525 ICAM4Q14773 271 aa17.45■□□□□ 0.38
PVT1-204ENST00000517525 KLLNB2CW77 178 aa17.44■□□□□ 0.38
PVT1-204ENST00000517525 CRISP2P16562 243 aa17.44■□□□□ 0.38
PVT1-204ENST00000517525 ZNF266Q14584 549 aa17.44■□□□□ 0.38
PVT1-204ENST00000517525 KHDC3LQ587J8 217 aa17.44■□□□□ 0.38
PVT1-204ENST00000517525 TIMM8BQ9Y5J9 83 aaPredicted RBP17.44■□□□□ 0.38
PVT1-204ENST00000517525 TRBV7-9A0A0J9YWB2 115 aa17.43■□□□□ 0.38
PVT1-204ENST00000517525 OR7C2O60412 319 aa17.43■□□□□ 0.38
PVT1-204ENST00000517525 OR10J4P0C629 311 aa17.43■□□□□ 0.38
PVT1-204ENST00000517525 M6PRP20645 277 aa17.43■□□□□ 0.38
PVT1-204ENST00000517525 RGS21Q2M5E4 152 aa17.43■□□□□ 0.38
PVT1-204ENST00000517525 ACOT6Q3I5F7 207 aaPredicted RBP17.43■□□□□ 0.38
PVT1-204ENST00000517525 PYGO2Q9BRQ0 406 aa17.43■□□□□ 0.38
PVT1-204ENST00000517525 LINC00467Q9BRT7 94 aa17.43■□□□□ 0.38
PVT1-204ENST00000517525 P0DMU3 169 aa17.42■□□□□ 0.38
PVT1-204ENST00000517525 FAM231AP0DMU4 169 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms