RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SSX7Q7RTT5 188 aa8.5□□□□□ -1.05
SNHG4-208ENST00000514110 ARL6IP6Q8N6S5 226 aa8.5□□□□□ -1.05
SNHG4-208ENST00000514110 LINC00612Q8N6U2 182 aa8.5□□□□□ -1.05
SNHG4-208ENST00000514110 SAT2Q96F10 170 aaPredicted RBP8.5□□□□□ -1.05
SNHG4-208ENST00000514110 C20orf144Q9BQM9 153 aa8.5□□□□□ -1.05
SNHG4-208ENST00000514110 C20orf85Q9H1P6 137 aa8.5□□□□□ -1.05
SNHG4-208ENST00000514110 PXMP4Q9Y6I8 212 aa8.5□□□□□ -1.05
SNHG4-208ENST00000514110 TRAV26-1A0A087WT03 109 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 C16orf90A8MZG2 172 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 J3KRW8 73 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 L7N2F9 121 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 CT45A10P0DMU9 189 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 CAMLGP49069 296 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 VAMP2P63027 116 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 OR5I1Q13606 314 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 CLINT1Q14677 625 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 MIC13Q5XKP0 118 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 NRARPQ7Z6K4 114 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 OR10J6PQ8NGY7 276 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 DNAJC4Q9NNZ3 241 aa8.49□□□□□ -1.05
SNHG4-208ENST00000514110 LSM5Q9Y4Y9 91 aaKnown RBP8.49□□□□□ -1.05
SNHG4-208ENST00000514110 ABCA13Q86UQ4 5058 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 FAM25EA8MYX2 175 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 PLA2G10O15496 165 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 GAGE7O76087 117 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 CST7O76096 145 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 GAGE12FP0CL80 117 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 GAGE12GP0CL81 117 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 GAGE12IP0CL82 117 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 HOXA5P20719 270 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 BCAP31P51572 246 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 ZNF846Q147U1 533 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 CCDC28AQ8IWP9 274 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 GNPNAT1Q96EK6 184 aaPredicted RBP8.48□□□□□ -1.05
SNHG4-208ENST00000514110 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 Q9H8V8 135 aa8.48□□□□□ -1.05
SNHG4-208ENST00000514110 TRAV12-3A0A0B4J271 114 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 A0A0J9YY99 117 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 FAM24AA6NFZ4 105 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 NPIPB6E9PJ23 425 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 RLN2P04090 185 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 M6PRP20645 277 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 CAV2P51636 162 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 CNPY1Q3B7I2 92 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 Q6ZRG5 221 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 RXFP4Q8TDU9 374 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 ZNF431Q8TF32 576 aaPredicted RBP8.47□□□□□ -1.05
SNHG4-208ENST00000514110 ODF3Q96PU9 254 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 SEC22CQ9BRL7 303 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 ZNF586Q9NXT0 402 aa8.47□□□□□ -1.05
SNHG4-208ENST00000514110 TRAV6A0A075B6T7 132 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 C5orf51A6NDU8 294 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 SNURFLB1AK76 121 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 LYRM1O43325 122 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 CDK2AP2O75956 126 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 LEPP41159 167 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 RAB31Q13636 194 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 GUK1Q16774 197 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 ESRGQ1W209 222 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 VWC2Q2TAL6 325 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 OR1L4Q8NGR5 311 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 UQCC1Q9NVA1 299 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 WDR83OSQ9Y284 106 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 LRP1BQ9NZR2 4599 aa8.46□□□□□ -1.06
SNHG4-208ENST00000514110 UBE2L5PA0A1B0GUS4 154 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 M0R3E3 92 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 TCRBP04435 133 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 ERCC8Q13216 396 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 Q6ZTI0 123 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 ZNF503Q96F45 646 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 PFDN5Q99471 154 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 PYGO2Q9BRQ0 406 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 Q9H3A6 140 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 SLC39A9Q9NUM3 307 aa8.45□□□□□ -1.06
SNHG4-208ENST00000514110 TRBV19A0A075B6N1 114 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 IGSF23A1L1A6 192 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 H3BNG1 76 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 ZNF253O75346 499 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 NDUFB4O95168 129 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 RPL29P47914 159 aaKnown RBP8.44□□□□□ -1.06
SNHG4-208ENST00000514110 BAXQ07812 192 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 DAZ2Q13117 558 aaKnown RBP8.44□□□□□ -1.06
SNHG4-208ENST00000514110 C12orf45Q8N5I9 185 aaPredicted RBP8.44□□□□□ -1.06
SNHG4-208ENST00000514110 C2orf50Q96LR7 162 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 UPK3BQ9BT76 320 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 LYRM2Q9NU23 88 aaPredicted RBP8.44□□□□□ -1.06
SNHG4-208ENST00000514110 NUDT15Q9NV35 164 aa8.44□□□□□ -1.06
SNHG4-208ENST00000514110 C7orf71A4D174 169 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 ZNF324O75467 553 aaPredicted RBP8.43□□□□□ -1.06
SNHG4-208ENST00000514110 SLC25A5P05141 298 aaKnown RBP8.43□□□□□ -1.06
SNHG4-208ENST00000514110 PVALBP20472 110 aaPredicted RBP8.43□□□□□ -1.06
SNHG4-208ENST00000514110 FGF7P21781 194 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 S100A11P31949 105 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 SULT1A1P50225 295 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 S100A10P60903 97 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 CD300CQ08708 224 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 IL15RAQ13261 267 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms