RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.41
DDX41-205ENST00000505081 A0A096LNJ9 63 aa12.52□□□□□ -0.41
DDX41-205ENST00000505081 SMKR1H3BMG3 65 aa12.52□□□□□ -0.41
DDX41-205ENST00000505081 MFAP4P55083 255 aa12.52□□□□□ -0.41
DDX41-205ENST00000505081 RNASE8Q8TDE3 154 aaKnown RBP12.52□□□□□ -0.41
DDX41-205ENST00000505081 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 BVES-AS1Q5T3Y7 98 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 OR8A1Q8NGG7 326 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 ARPC1AQ92747 370 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 RNF24Q9Y225 148 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
DDX41-205ENST00000505081 LINC01545Q5VT33 79 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 VGLL1Q99990 258 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 C21orf62Q9NYP8 219 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 SIGLEC8Q9NYZ4 499 aa12.51□□□□□ -0.41
DDX41-205ENST00000505081 LOC105371242A0A075B767 164 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 CCL21O00585 134 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 C21orf62-AS1Q17RA5 79 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 RAB1BQ9H0U4 201 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 CBY3A6NI87 242 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 TAX1BP3O14907 124 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 EGR2P11161 476 aaPredicted RBP12.5□□□□□ -0.41
DDX41-205ENST00000505081 RELQ04864 619 aaPredicted RBP12.5□□□□□ -0.41
DDX41-205ENST00000505081 VAMP3Q15836 100 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 SMAD5-AS1Q9Y6J3 95 aa12.5□□□□□ -0.41
DDX41-205ENST00000505081 NPIPB5A8MRT5 1133 aa12.49□□□□□ -0.41
DDX41-205ENST00000505081 ODF3BA8MYP8 253 aa12.49□□□□□ -0.41
DDX41-205ENST00000505081 K7ENP7 123 aa12.49□□□□□ -0.41
DDX41-205ENST00000505081 CEACAM3P40198 252 aa12.49□□□□□ -0.41
DDX41-205ENST00000505081 CSN1S1P47710 185 aa12.49□□□□□ -0.41
DDX41-205ENST00000505081 OR10AG1Q8NH19 301 aa12.49□□□□□ -0.41
DDX41-205ENST00000505081 PRELID3AQ96N28 172 aa12.49□□□□□ -0.41
DDX41-205ENST00000505081 SFTPCP11686 197 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 ZNF562Q6V9R5 426 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 PRTN3P24158 256 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 MRPL51Q4U2R6 128 aaKnown RBP12.48□□□□□ -0.41
DDX41-205ENST00000505081 FAM104BQ5XKR9 115 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 ZNF493Q6ZR52 646 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 VMO1Q7Z5L0 202 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 TRAV30A0A087WSZ9 112 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 IGHG4P01861 327 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 CTSGP08311 255 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 WFDC3Q8IUB2 231 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 PRR25Q96S07 402 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 MSRB1Q9NZV6 116 aa12.48□□□□□ -0.41
DDX41-205ENST00000505081 PDE6HQ13956 83 aa12.47□□□□□ -0.41
DDX41-205ENST00000505081 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
DDX41-205ENST00000505081 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
DDX41-205ENST00000505081 TTC9CQ8N5M4 171 aa12.47□□□□□ -0.41
DDX41-205ENST00000505081 PPP1R14DQ9NXH3 145 aa12.47□□□□□ -0.41
DDX41-205ENST00000505081 IGHV3-66A0A0C4DH42 116 aa12.46□□□□□ -0.41
DDX41-205ENST00000505081 IGHV2-70DA0A0C4DH43 119 aa12.46□□□□□ -0.41
DDX41-205ENST00000505081 A0A1B0GW15 77 aa12.46□□□□□ -0.41
DDX41-205ENST00000505081 GAS8-AS1O95177 125 aa12.46□□□□□ -0.41
DDX41-205ENST00000505081 ZFP36P26651 326 aaKnown RBP12.46□□□□□ -0.41
DDX41-205ENST00000505081 ERCC8Q13216 396 aa12.46□□□□□ -0.41
DDX41-205ENST00000505081 Q6AWC8 147 aa12.46□□□□□ -0.41
DDX41-205ENST00000505081 C2orf91Q6ZV80 131 aa12.46□□□□□ -0.41
DDX41-205ENST00000505081 ZNF575Q86XF7 245 aa12.46□□□□□ -0.41
DDX41-205ENST00000505081 CELSR1Q9NYQ6 3014 aa12.46□□□□□ -0.42
DDX41-205ENST00000505081 NDUFS7O75251 213 aa12.46□□□□□ -0.42
DDX41-205ENST00000505081 NPYP01303 97 aa12.46□□□□□ -0.42
DDX41-205ENST00000505081 RHOGP84095 191 aa12.46□□□□□ -0.42
DDX41-205ENST00000505081 TWIST1Q15672 202 aa12.46□□□□□ -0.42
DDX41-205ENST00000505081 IGHV3OR16-13A0A075B7E8 117 aa12.45□□□□□ -0.42
DDX41-205ENST00000505081 IGHV3-74A0A0B4J1X5 117 aa12.45□□□□□ -0.42
DDX41-205ENST00000505081 ORMDL3Q8N138 153 aa12.45□□□□□ -0.42
DDX41-205ENST00000505081 OR4C5Q8NGB2 326 aa12.45□□□□□ -0.42
DDX41-205ENST00000505081 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
DDX41-205ENST00000505081 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
DDX41-205ENST00000505081 PSG9Q00887 426 aa12.45□□□□□ -0.42
DDX41-205ENST00000505081 IGHV7-81A0A0B4J1V7 117 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 M0R1W7 72 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 COX8AP10176 69 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 RPL7P18124 248 aaKnown RBP12.44□□□□□ -0.42
DDX41-205ENST00000505081 PPIFP30405 207 aaKnown RBP12.44□□□□□ -0.42
DDX41-205ENST00000505081 GPR183P32249 361 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 NBL1P41271 181 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 CACNG7P62955 275 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 ADORA2A-AS1P86434 159 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 DEFB125Q8N687 156 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 RNF182Q8N6D2 247 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 U3KQK5 164 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 TMEM11P17152 192 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 RABAC1Q9UI14 185 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 CBY1Q9Y3M2 126 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 CKS2P33552 79 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 Q8N6K4 173 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 FER1L6-AS1Q8NA97 138 aa12.44□□□□□ -0.42
DDX41-205ENST00000505081 ORM1P02763 201 aa12.43□□□□□ -0.42
DDX41-205ENST00000505081 NHLH1Q02575 133 aa12.43□□□□□ -0.42
DDX41-205ENST00000505081 ECSCRQ19T08 205 aa12.43□□□□□ -0.42
DDX41-205ENST00000505081 C12orf54Q6X4T0 127 aa12.43□□□□□ -0.42
DDX41-205ENST00000505081 VPS13CQ709C8 3753 aa12.43□□□□□ -0.42
DDX41-205ENST00000505081 HIST1H1AQ02539 215 aaPredicted RBP12.43□□□□□ -0.42
DDX41-205ENST00000505081 FBXL19-AS1Q494R0 122 aa12.43□□□□□ -0.42
DDX41-205ENST00000505081 AMMECR1LQ6DCA0 310 aa12.43□□□□□ -0.42
DDX41-205ENST00000505081 ZNF48Q96MX3 618 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms