RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 SH3BGRL3Q9H299 93 aa16.27■□□□□ 0.2
CDKN2A-208ENST00000498124 A0A1W2PPV4 95 aa16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 IGLL5B9A064 214 aa16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 EIF5AP63241 154 aaKnown RBP16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 OR10G4Q8NGN3 311 aa16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 OR10G9Q8NGN4 311 aa16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 OR10G7Q8NGN6 311 aa16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 FAM167A-AS1Q96KT0 104 aa16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 SLC50A1Q9BRV3 221 aa16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 CELA1Q9UNI1 258 aa16.26■□□□□ 0.19
CDKN2A-208ENST00000498124 H3BQ15 152 aa16.25■□□□□ 0.19
CDKN2A-208ENST00000498124 HIST1H1EP10412 219 aaKnown RBP16.25■□□□□ 0.19
CDKN2A-208ENST00000498124 KHDC3LQ587J8 217 aa16.25■□□□□ 0.19
CDKN2A-208ENST00000498124 ZNF471Q9BX82 626 aaPredicted RBP16.25■□□□□ 0.19
CDKN2A-208ENST00000498124 OR51M1Q9H341 326 aa16.25■□□□□ 0.19
CDKN2A-208ENST00000498124 RPRMQ9NS64 109 aa16.25■□□□□ 0.19
CDKN2A-208ENST00000498124 TRAV8-2A0A0B4J237 113 aa16.24■□□□□ 0.19
CDKN2A-208ENST00000498124 H3BMM0 161 aa16.24■□□□□ 0.19
CDKN2A-208ENST00000498124 ZFP69Q49AA0 526 aa16.24■□□□□ 0.19
CDKN2A-208ENST00000498124 FAM122CQ6P4D5 195 aa16.24■□□□□ 0.19
CDKN2A-208ENST00000498124 PAXXQ9BUH6 204 aa16.24■□□□□ 0.19
CDKN2A-208ENST00000498124 OR7C2O60412 319 aa16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 SNRPCP09234 159 aaKnown RBP16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 PYYP10082 97 aa16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 CD300CQ08708 224 aa16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 LGALSLQ3ZCW2 172 aaPredicted RBP16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 FOXI2Q6ZQN5 318 aa16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 C20orf173Q96LM9 149 aa16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 ZNF331Q9NQX6 463 aaPredicted RBP16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 ZNF586Q9NXT0 402 aa16.23■□□□□ 0.19
CDKN2A-208ENST00000498124 KIAA1109Q2LD37 5005 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 TRAV10A0A0B4J240 114 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 H3BTX0 84 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 ZNF253O75346 499 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 HLA-DRB4P13762 266 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 CDC34P49427 236 aaPredicted RBP16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 DEFB1P60022 68 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 PDE6HQ13956 83 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 GDF5OSQ5U4N7 250 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 HLA-DRB4X5D2U9 266 aa16.22■□□□□ 0.19
CDKN2A-208ENST00000498124 TRBV19A0A075B6N1 114 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 C12orf74Q32Q52 190 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 AKR1C8PQ5T2L2 129 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 IGFL4Q6B9Z1 124 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 EBLN2Q6P2I7 272 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 RNF182Q8N6D2 247 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 ZNF738Q8NE65 137 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 RNF141Q8WVD5 230 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 SAT2Q96F10 170 aaPredicted RBP16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 ACTR3CQ9C0K3 210 aaPredicted RBP16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 SAV1Q9H4B6 383 aaPredicted RBP16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 XCL2Q9UBD3 114 aa16.21■□□□□ 0.19
CDKN2A-208ENST00000498124 IGHV4-4A0A075B6R2 117 aa16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 SLC17A3O00476 420 aa16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 NBEAP1P0C6P0 100 aa16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 TPT1P13693 172 aaKnown RBP16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 UBE2L3P68036 154 aaKnown RBP16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 PSG3Q16557 428 aa16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 PQLC2Q6ZP29 291 aa16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 ZNF767PQ75MW2 155 aa16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 FXYD5Q96DB9 178 aa16.2■□□□□ 0.18
CDKN2A-208ENST00000498124 OR10J4P0C629 311 aa16.19■□□□□ 0.18
CDKN2A-208ENST00000498124 PSG9Q00887 426 aa16.19■□□□□ 0.18
CDKN2A-208ENST00000498124 ZNF705AQ6ZN79 300 aaPredicted RBP16.19■□□□□ 0.18
CDKN2A-208ENST00000498124 BLNKQ8WV28 456 aa16.19■□□□□ 0.18
CDKN2A-208ENST00000498124 C1QTNF4Q9BXJ3 329 aa16.19■□□□□ 0.18
CDKN2A-208ENST00000498124 PKHD1P08F94 4074 aa16.19■□□□□ 0.18
CDKN2A-208ENST00000498124 SEC11BP0C7V7 166 aa16.18■□□□□ 0.18
CDKN2A-208ENST00000498124 BAP18Q8IXM2 172 aa16.18■□□□□ 0.18
CDKN2A-208ENST00000498124 STOML3Q8TAV4 291 aa16.18■□□□□ 0.18
CDKN2A-208ENST00000498124 RAB24Q969Q5 203 aa16.18■□□□□ 0.18
CDKN2A-208ENST00000498124 ZNF503Q96F45 646 aa16.18■□□□□ 0.18
CDKN2A-208ENST00000498124 EIF3GO75821 320 aaKnown RBP eCLIP16.17■□□□□ 0.18
CDKN2A-208ENST00000498124 AMBPP02760 352 aa16.17■□□□□ 0.18
CDKN2A-208ENST00000498124 NUTF2P61970 127 aaKnown RBP16.17■□□□□ 0.18
CDKN2A-208ENST00000498124 C9orf62Q8N4C0 152 aa16.17■□□□□ 0.18
CDKN2A-208ENST00000498124 A0A0J9YX75 114 aa16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 ZNF705FA8MVS1 300 aaPredicted RBP16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 DUSP14O95147 198 aaKnown RBP16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 NDUFB4O95168 129 aa16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 ZNF705DP0CH99 300 aaPredicted RBP16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 ZNF705BP0CI00 300 aaPredicted RBP16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 STAG3L2P0CL84 134 aa16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 STAG3L3P0CL85 134 aa16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 RPUSD4Q96CM3 377 aaKnown RBP16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 CLUHP3Q96NS8 147 aa16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 KRTAP17-1Q9BYP8 105 aa16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 AAMDCQ9H7C9 122 aa16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 PRELID1Q9Y255 219 aa16.16■□□□□ 0.18
CDKN2A-208ENST00000498124 DEFB131BA0A096LNP1 70 aa16.15■□□□□ 0.18
CDKN2A-208ENST00000498124 UMAD1C9J7I0 102 aa16.15■□□□□ 0.18
CDKN2A-208ENST00000498124 F6UB75 175 aa16.15■□□□□ 0.18
CDKN2A-208ENST00000498124 HMGB3O15347 200 aaKnown RBP16.15■□□□□ 0.18
CDKN2A-208ENST00000498124 EIF5AL1Q6IS14 154 aaKnown RBP16.15■□□□□ 0.18
CDKN2A-208ENST00000498124 MRPL53Q96EL3 112 aaKnown RBP16.15■□□□□ 0.18
CDKN2A-208ENST00000498124 NEU1Q99519 415 aa16.15■□□□□ 0.18
CDKN2A-208ENST00000498124 CTXND1A0A1B0GTU2 59 aa16.14■□□□□ 0.17
CDKN2A-208ENST00000498124 IGKV3-20P01619 116 aa16.14■□□□□ 0.17
CDKN2A-208ENST00000498124 ARL14EPLP0DKL9 152 aa16.14■□□□□ 0.17
CDKN2A-208ENST00000498124 FXYD7P58549 80 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms