RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 NDUFB4O95168 129 aa11.11□□□□□ -0.63
ACTB-213ENST00000493945 KRTAP10-11P60412 298 aa11.11□□□□□ -0.63
ACTB-213ENST00000493945 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
ACTB-213ENST00000493945 RNF182Q8N6D2 247 aa11.11□□□□□ -0.63
ACTB-213ENST00000493945 HIST1H2BAQ96A08 127 aa11.11□□□□□ -0.63
ACTB-213ENST00000493945 SAV1Q9H4B6 383 aaPredicted RBP11.11□□□□□ -0.63
ACTB-213ENST00000493945 SRD5A3Q9H8P0 318 aa11.11□□□□□ -0.63
ACTB-213ENST00000493945 TRAV8-2A0A0B4J237 113 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 RBAKDNA6NC62 111 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 FAM74A7A6NL05 159 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 BCL2P10415 239 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 HLA-DRB4P13762 266 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 APOC4P55056 127 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
ACTB-213ENST00000493945 ACTL10Q5JWF8 245 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 TMPRSS5Q9H3S3 457 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 AURKAIP1Q9NWT8 199 aaPredicted RBP11.1□□□□□ -0.63
ACTB-213ENST00000493945 HLA-DRB4X5D2U9 266 aa11.1□□□□□ -0.63
ACTB-213ENST00000493945 C11orf94C9JXX5 98 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 PDE6DO43924 150 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 PAGE4O60829 102 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 SUMO1P63165 101 aaKnown RBP11.09□□□□□ -0.63
ACTB-213ENST00000493945 MORN3Q6PF18 240 aaPredicted RBP11.09□□□□□ -0.63
ACTB-213ENST00000493945 CYB561D1Q8N8Q1 229 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 OR8A1Q8NGG7 326 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 ATG101Q9BSB4 218 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 NDFIP1Q9BT67 221 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 C1QTNF4Q9BXJ3 329 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 VAX2Q9UIW0 290 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
ACTB-213ENST00000493945 LOC102724200A0A096LPH7 203 aaPredicted RBP11.08□□□□□ -0.64
ACTB-213ENST00000493945 A0A0J9YX75 114 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 A8MZ25 164 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 AMBPP02760 352 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 TSPOP30536 169 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 MEF2BQ02080 365 aaPredicted RBP11.08□□□□□ -0.64
ACTB-213ENST00000493945 IGFL4Q6B9Z1 124 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 APRG1Q8IVJ8 170 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 DEFB125Q8N687 156 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 OR4B1Q8NGF8 309 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 LYPD6BQ8NI32 183 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 C20orf173Q96LM9 149 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
ACTB-213ENST00000493945 GGTLC3B5MD39 225 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 M0R3E3 92 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 S100A9P06702 114 aaKnown RBP11.07□□□□□ -0.64
ACTB-213ENST00000493945 NMBP08949 121 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 IGHV4-30-4P0DP06 118 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 AKR1C3P42330 323 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
ACTB-213ENST00000493945 UBE2G1P62253 170 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 EIF5A2Q9GZV4 153 aaKnown RBP11.07□□□□□ -0.64
ACTB-213ENST00000493945 C19orf73Q9NVV2 129 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 YTHDF2Q9Y5A9 579 aaKnown RBP11.07□□□□□ -0.64
ACTB-213ENST00000493945 DNHD1Q96M86 4753 aa11.07□□□□□ -0.64
ACTB-213ENST00000493945 KIR2DL5BA0A0G2JN68 375 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 KIR2DL5BA0A0G2JPC4 375 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 RBFOX3A6NFN3 312 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 KNCNA6PVL3 124 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 DIRC3C9JPN6 131 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 PEX7O00628 323 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 TCRAP04437 139 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 HAGHQ16775 308 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 CLLU1Q5K131 121 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 KIR2DL5AQ8N109 375 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 Q8N1Y9 231 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 KIR2DL5BQ8NHK3 375 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 MRAPQ8TCY5 172 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 EPDR1Q9UM22 224 aa11.06□□□□□ -0.64
ACTB-213ENST00000493945 NOTCH1P46531 2555 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 TRBV7-9A0A0J9YWB2 115 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 ZNF705FA8MVS1 300 aaPredicted RBP11.05□□□□□ -0.64
ACTB-213ENST00000493945 H3BMM0 161 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 UBE2CO00762 179 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 RGS13O14921 159 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 NDUFS6O75380 124 aaKnown RBP11.05□□□□□ -0.64
ACTB-213ENST00000493945 LEPP41159 167 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 DEFB121Q5J5C9 76 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 GOLT1AQ6ZVE7 132 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 TRPT1Q86TN4 253 aaKnown RBP11.05□□□□□ -0.64
ACTB-213ENST00000493945 TMEM75Q8N9X5 138 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 FMC1Q96HJ9 113 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 FAM210AQ96ND0 272 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 SMDT1Q9H4I9 107 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 LENEPQ9Y5L5 61 aa11.05□□□□□ -0.64
ACTB-213ENST00000493945 LOC102723971A0A1B0GUV8 181 aa11.04□□□□□ -0.64
ACTB-213ENST00000493945 NPIPB6E9PJ23 425 aa11.04□□□□□ -0.64
ACTB-213ENST00000493945 ATP5G3P48201 142 aa11.04□□□□□ -0.64
ACTB-213ENST00000493945 PEA15Q15121 130 aa11.04□□□□□ -0.64
ACTB-213ENST00000493945 TOR2AQ5JU69 321 aa11.04□□□□□ -0.64
ACTB-213ENST00000493945 C9orf47Q6ZRZ4 202 aa11.04□□□□□ -0.64
ACTB-213ENST00000493945 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
ACTB-213ENST00000493945 IGKV2-40A0A087WW87 121 aaPredicted RBP11.03□□□□□ -0.64
ACTB-213ENST00000493945 F6UB75 175 aa11.03□□□□□ -0.64
ACTB-213ENST00000493945 IGKV2D-40P01614 121 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms