RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TSPOP30536 169 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 CDKN1BP46527 198 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 PDE6HQ13956 83 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 RRN3P1Q2M238 152 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 ACOT6Q3I5F7 207 aaPredicted RBP5.03□□□□□ -1.6
TOP3A-207ENST00000493648 FFAR4Q5NUL3 377 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 MIR17HGQ75NE6 70 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 C1orf158Q8N1D5 194 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 INO80EQ8NBZ0 244 aaPredicted RBP5.03□□□□□ -1.6
TOP3A-207ENST00000493648 C2CD4CQ8TF44 421 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 BLNKQ8WV28 456 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 MRPL53Q96EL3 112 aaKnown RBP5.03□□□□□ -1.6
TOP3A-207ENST00000493648 PAXXQ9BUH6 204 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 SLC25A2Q9BXI2 301 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 OR51M1Q9H341 326 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 AAMDCQ9H7C9 122 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 FUT9Q9Y231 359 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 TRAV12-2A0A075B6T6 113 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 TRAV10A0A0B4J240 114 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 TEX48A0A1B0GUV7 120 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 LOC102723971A0A1B0GUV8 181 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 A0A1W2PPV4 95 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 PRAC2D3DTV9 90 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 CRXO43186 299 aaPredicted RBP5.02□□□□□ -1.61
TOP3A-207ENST00000493648 NDUFB4O95168 129 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 PYYP10082 97 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 EMP1P54849 157 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 TCTAP57738 103 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 TAS2R45P59539 299 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 ZNF266Q14584 549 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 TMEM256Q8N2U0 113 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 RNF141Q8WVD5 230 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 FAM167A-AS1Q96KT0 104 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 AQP10Q96PS8 301 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 LINC01587Q99440 93 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 WFDC1Q9HC57 220 aa5.02□□□□□ -1.61
TOP3A-207ENST00000493648 ZNF705GA8MUZ8 300 aaPredicted RBP5.01□□□□□ -1.61
TOP3A-207ENST00000493648 NPIPB6E9PJ23 425 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 OR7C2O60412 319 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 OR10J4P0C629 311 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 PRB4P10163 310 aaPredicted RBP5.01□□□□□ -1.61
TOP3A-207ENST00000493648 M6PRP20645 277 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 LEPP41159 167 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 ICAM4Q14773 271 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 C12orf74Q32Q52 190 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 KHDC3LQ587J8 217 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 Q5BKY6 102 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 Q6ZTC4 211 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 BAP18Q8IXM2 172 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 LYPD1Q8N2G4 141 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 EXOC3-AS1Q8N2X6 119 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 RPP25LQ8N5L8 163 aaKnown RBP5.01□□□□□ -1.61
TOP3A-207ENST00000493648 OR10G4Q8NGN3 311 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 OR10G9Q8NGN4 311 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 OR10G7Q8NGN6 311 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 FXYD5Q96DB9 178 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 LINC00477Q96M19 166 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 ODF3Q96PU9 254 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 C20orf144Q9BQM9 153 aa5.01□□□□□ -1.61
TOP3A-207ENST00000493648 TENM2Q9NT68 2774 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 FXYD6-FXYD2A0A087WZ82 144 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 DEFB131BA0A096LNP1 70 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 BORCS7-ASMTA0A0B4J1R7 106 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 A0A1B0GVG6 124 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 IGLL5B9A064 214 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 H7BYZ3 331 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 M0R3E3 92 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 LY6G6CO95867 125 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 MBP02144 154 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 CT45A10P0DMU9 189 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 HTN1P15515 57 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 CSN1S1P47710 185 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 TAS2R60P59551 318 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 RANP62826 216 aaKnown RBP5□□□□□ -1.61
TOP3A-207ENST00000493648 UBE2L3P68036 154 aaKnown RBP5□□□□□ -1.61
TOP3A-207ENST00000493648 SERF2P84101 59 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 FAM74A1Q5RGS3 127 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 TMEM78Q5T7P6 136 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 FAM222AQ5U5X8 452 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 FAM122CQ6P4D5 195 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 ZNF767PQ75MW2 155 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 CCDC28AQ8IWP9 274 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 HSD17B11Q8NBQ5 300 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 OR2T35Q8NGX2 323 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 LINC00476Q8WZB0 136 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 NIPSNAP3BQ9BS92 247 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 DKK2Q9UBU2 259 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 CELA1Q9UNI1 258 aa5□□□□□ -1.61
TOP3A-207ENST00000493648 YTHDF2Q9Y5A9 579 aaKnown RBP5□□□□□ -1.61
TOP3A-207ENST00000493648 LYRM9A8MSI8 78 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 SLC25A5P05141 298 aaKnown RBP4.99□□□□□ -1.61
TOP3A-207ENST00000493648 NMBP08949 121 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 ATP6V0CP27449 155 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 RAB2AP61019 212 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 DAD1P61803 113 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 ERCC8Q13216 396 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 LINC01559Q495D7 138 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 XP32Q5T750 250 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 LGALS9CQ6DKI2 356 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 PQLC2Q6ZP29 291 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms