RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FMC1Q96HJ9 113 aa17.77■□□□□ 0.44
USF3-203ENST00000491165 MLST8Q9BVC4 326 aa17.77■□□□□ 0.44
USF3-203ENST00000491165 HSBP1O75506 76 aa17.77■□□□□ 0.43
USF3-203ENST00000491165 TOMM40O96008 361 aa17.77■□□□□ 0.43
USF3-203ENST00000491165 CAMPP49913 170 aa17.77■□□□□ 0.43
USF3-203ENST00000491165 PPP1R27Q86WC6 154 aa17.77■□□□□ 0.43
USF3-203ENST00000491165 ALKBH7Q9BT30 221 aaPredicted RBP17.77■□□□□ 0.43
USF3-203ENST00000491165 SSBP4Q9BWG4 385 aaPredicted RBP17.77■□□□□ 0.43
USF3-203ENST00000491165 RPP21Q9H633 154 aaKnown RBP17.77■□□□□ 0.43
USF3-203ENST00000491165 IGHV3-21A0A0B4J1V1 117 aa17.76■□□□□ 0.43
USF3-203ENST00000491165 A0A1B0GXF2 115 aa17.76■□□□□ 0.43
USF3-203ENST00000491165 PLP1P60201 277 aa17.76■□□□□ 0.43
USF3-203ENST00000491165 C5orf64Q2M2E5 130 aa17.76■□□□□ 0.43
USF3-203ENST00000491165 C5orf56Q8N8D9 126 aa17.75■□□□□ 0.43
USF3-203ENST00000491165 UQCR10Q9UDW1 63 aa17.75■□□□□ 0.43
USF3-203ENST00000491165 VPREB3Q9UKI3 123 aa17.75■□□□□ 0.43
USF3-203ENST00000491165 F11RQ9Y624 299 aaKnown RBP17.75■□□□□ 0.43
USF3-203ENST00000491165 LTAP01374 205 aa17.75■□□□□ 0.43
USF3-203ENST00000491165 Q9H3A6 140 aa17.75■□□□□ 0.43
USF3-203ENST00000491165 PLGLAQ15195 96 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 BATFQ16520 125 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 CT83Q5H943 113 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 Q6ZS46 218 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 ZNF492Q9P255 531 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 DNAJC9-AS1A6NH13 148 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 CRLF1O75462 422 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 TCRAP04437 139 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 HBBP68871 147 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 TCF24Q7RTU0 167 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 PRSS22Q9GZN4 317 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 WNT10AQ9GZT5 417 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 HIGD1AQ9Y241 93 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 MOB4Q9Y3A3 225 aa17.74■□□□□ 0.43
USF3-203ENST00000491165 A8MWL6 223 aa17.73■□□□□ 0.43
USF3-203ENST00000491165 M0R2Z0 102 aa17.73■□□□□ 0.43
USF3-203ENST00000491165 P01737 135 aa17.73■□□□□ 0.43
USF3-203ENST00000491165 IGLC2P0DOY2 106 aa17.73■□□□□ 0.43
USF3-203ENST00000491165 IGLC3P0DOY3 106 aa17.73■□□□□ 0.43
USF3-203ENST00000491165 BLCAPP62952 87 aa17.73■□□□□ 0.43
USF3-203ENST00000491165 LEMD1Q68G75 181 aa17.73■□□□□ 0.43
USF3-203ENST00000491165 RNASEKQ6P5S7 137 aaKnown RBP17.73■□□□□ 0.43
USF3-203ENST00000491165 FAM181BA6NEQ2 426 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 TEX22C9J3V5 150 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 NDPQ00604 133 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 PMCHL1Q16048 86 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 LINC00322Q6ZN03 302 aaPredicted RBP17.72■□□□□ 0.43
USF3-203ENST00000491165 OR2D3Q8NGH3 330 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 C19orf71A6NCJ1 209 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 H3BTX0 84 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 KLHDC1Q8N7A1 406 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 TMEM208Q9BTX3 173 aa17.72■□□□□ 0.43
USF3-203ENST00000491165 LINC01548A6NM66 108 aa17.71■□□□□ 0.43
USF3-203ENST00000491165 C1RLQ9NZP8 487 aa17.71■□□□□ 0.43
USF3-203ENST00000491165 LYZP61626 148 aa17.71■□□□□ 0.42
USF3-203ENST00000491165 DAZAP1Q96EP5 407 aaKnown RBP17.71■□□□□ 0.42
USF3-203ENST00000491165 TXN2Q99757 166 aa17.71■□□□□ 0.42
USF3-203ENST00000491165 PSG1P11464 419 aa17.7■□□□□ 0.42
USF3-203ENST00000491165 COL5A1-AS1Q5SY13 56 aa17.7■□□□□ 0.42
USF3-203ENST00000491165 OTORQ9NRC9 128 aa17.7■□□□□ 0.42
USF3-203ENST00000491165 IGHV7-81A0A0B4J1V7 117 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 DLEU1O43261 78 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 IGLC1P0CG04 106 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 FAM162BQ5T6X4 162 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 LCN12Q6JVE5 192 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 GTSF1Q8WW33 167 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 RASL11BQ9BPW5 248 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 GFRA4Q9GZZ7 299 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 BTF3P20290 206 aaKnown RBP17.69■□□□□ 0.42
USF3-203ENST00000491165 GAGE1Q13065 139 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 Q6ZN92 141 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 SRSF12Q8WXF0 261 aaKnown RBP17.69■□□□□ 0.42
USF3-203ENST00000491165 TMEM14CQ9P0S9 112 aa17.69■□□□□ 0.42
USF3-203ENST00000491165 HLA-DRB1P01911 266 aa17.68■□□□□ 0.42
USF3-203ENST00000491165 HNRNPA3P51991 378 aaKnown RBP17.68■□□□□ 0.42
USF3-203ENST00000491165 SRSF2Q01130 221 aaKnown RBP17.68■□□□□ 0.42
USF3-203ENST00000491165 EBLN2Q6P2I7 272 aa17.68■□□□□ 0.42
USF3-203ENST00000491165 ATOH7Q8N100 152 aa17.68■□□□□ 0.42
USF3-203ENST00000491165 PGLYRP4Q96LB8 373 aa17.68■□□□□ 0.42
USF3-203ENST00000491165 HILS1P60008 231 aa17.68■□□□□ 0.42
USF3-203ENST00000491165 SCGB2A2Q13296 93 aa17.68■□□□□ 0.42
USF3-203ENST00000491165 RBPMS2Q6ZRY4 209 aaKnown RBP17.68■□□□□ 0.42
USF3-203ENST00000491165 Q86TA4 180 aa17.68■□□□□ 0.42
USF3-203ENST00000491165 SLC25A39Q9BZJ4 359 aaPredicted RBP17.68■□□□□ 0.42
USF3-203ENST00000491165 JMJD1CQ15652 2540 aa17.67■□□□□ 0.42
USF3-203ENST00000491165 I3L2K1 104 aa17.66■□□□□ 0.42
USF3-203ENST00000491165 ZNF562Q6V9R5 426 aa17.66■□□□□ 0.42
USF3-203ENST00000491165 TMEM86BQ8N661 226 aa17.66■□□□□ 0.42
USF3-203ENST00000491165 SETD2Q9BYW2 2564 aaPredicted RBP17.66■□□□□ 0.42
USF3-203ENST00000491165 FAM231BA6NCW3 169 aa17.66■□□□□ 0.42
USF3-203ENST00000491165 C2orf70A6NJV1 201 aa17.66■□□□□ 0.42
USF3-203ENST00000491165 EGR2P11161 476 aaPredicted RBP17.66■□□□□ 0.42
USF3-203ENST00000491165 Q56UQ5 140 aa17.66■□□□□ 0.42
USF3-203ENST00000491165 ZNF418Q8TF45 676 aaPredicted RBP17.66■□□□□ 0.42
USF3-203ENST00000491165 GOLT1BQ9Y3E0 138 aa17.66■□□□□ 0.42
USF3-203ENST00000491165 URB1-AS1Q96HZ7 61 aa17.65■□□□□ 0.42
USF3-203ENST00000491165 TRAV9-2A0A087WT02 112 aa17.65■□□□□ 0.42
USF3-203ENST00000491165 NPIPB6E9PJ23 425 aa17.65■□□□□ 0.42
USF3-203ENST00000491165 CNIH1O95406 144 aa17.65■□□□□ 0.42
USF3-203ENST00000491165 MAJINQ3KP22 176 aa17.65■□□□□ 0.42
USF3-203ENST00000491165 PRR31Q5SQ13 230 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms