RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 DEFB131AP59861 70 aa13.87□□□□□ -0.19
MCF2L-230ENST00000491028 SUMO1P63165 101 aaKnown RBP13.87□□□□□ -0.19
MCF2L-230ENST00000491028 KPRPQ5T749 579 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-230ENST00000491028 CST9LP1Q5W188 147 aa13.87□□□□□ -0.19
MCF2L-230ENST00000491028 C5orf17Q8NAS9 161 aa13.87□□□□□ -0.19
MCF2L-230ENST00000491028 CMTM2Q8TAZ6 248 aa13.87□□□□□ -0.19
MCF2L-230ENST00000491028 NOTCH3Q9UM47 2321 aa13.87□□□□□ -0.19
MCF2L-230ENST00000491028 M0R3E3 92 aa13.86□□□□□ -0.19
MCF2L-230ENST00000491028 SLC25A5P05141 298 aaKnown RBP13.86□□□□□ -0.19
MCF2L-230ENST00000491028 KRTAP10-11P60412 298 aa13.86□□□□□ -0.19
MCF2L-230ENST00000491028 HAGHQ16775 308 aa13.86□□□□□ -0.19
MCF2L-230ENST00000491028 RPUSD4Q96CM3 377 aaKnown RBP13.86□□□□□ -0.19
MCF2L-230ENST00000491028 FAM210AQ96ND0 272 aa13.86□□□□□ -0.19
MCF2L-230ENST00000491028 C19orf73Q9NVV2 129 aa13.86□□□□□ -0.19
MCF2L-230ENST00000491028 VAX2Q9UIW0 290 aa13.86□□□□□ -0.19
MCF2L-230ENST00000491028 CMYA5Q8N3K9 4069 aa13.85□□□□□ -0.19
MCF2L-230ENST00000491028 SORL1Q92673 2214 aa13.85□□□□□ -0.19
MCF2L-230ENST00000491028 LOC102723971A0A1B0GUV8 181 aa13.85□□□□□ -0.19
MCF2L-230ENST00000491028 RBFOX3A6NFN3 312 aa13.85□□□□□ -0.19
MCF2L-230ENST00000491028 C11orf94C9JXX5 98 aa13.85□□□□□ -0.19
MCF2L-230ENST00000491028 ATP5G3P48201 142 aa13.85□□□□□ -0.19
MCF2L-230ENST00000491028 MEF2BQ02080 365 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-230ENST00000491028 CCDC28AQ8IWP9 274 aa13.85□□□□□ -0.19
MCF2L-230ENST00000491028 SERTM2A0A1B0GWG4 89 aa13.84□□□□□ -0.19
MCF2L-230ENST00000491028 ZNF506Q5JVG8 444 aa13.84□□□□□ -0.19
MCF2L-230ENST00000491028 FOXI2Q6ZQN5 318 aa13.84□□□□□ -0.19
MCF2L-230ENST00000491028 PRR25Q96S07 402 aa13.84□□□□□ -0.19
MCF2L-230ENST00000491028 ZNF705FA8MVS1 300 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-230ENST00000491028 TOR2AQ5JU69 321 aa13.83□□□□□ -0.2
MCF2L-230ENST00000491028 EBLN2Q6P2I7 272 aa13.83□□□□□ -0.2
MCF2L-230ENST00000491028 HIST1H2BAQ96A08 127 aa13.83□□□□□ -0.2
MCF2L-230ENST00000491028 SAV1Q9H4B6 383 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-230ENST00000491028 EPDR1Q9UM22 224 aa13.83□□□□□ -0.2
MCF2L-230ENST00000491028 A0A0J9YX75 114 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 RBAKDNA6NC62 111 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 DIRC3C9JPN6 131 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 F6UZH7 168 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 PDE6DO43924 150 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 NDUFS6O75380 124 aaKnown RBP13.82□□□□□ -0.2
MCF2L-230ENST00000491028 TCRAP04437 139 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 APRG1Q8IVJ8 170 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 Q8N1Y9 231 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 OR8A1Q8NGG7 326 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 ATG101Q9BSB4 218 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 EIF5A2Q9GZV4 153 aaKnown RBP13.82□□□□□ -0.2
MCF2L-230ENST00000491028 MED9Q9NWA0 146 aa13.82□□□□□ -0.2
MCF2L-230ENST00000491028 PRAC2D3DTV9 90 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 K7EQM0 130 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 PEX7O00628 323 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 HLA-DRB4P13762 266 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 GNG5P63218 68 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 CYB561D1Q8N8Q1 229 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 OR10J6PQ8NGY7 276 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 RARRES2Q99969 163 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 RPH3ALQ9UNE2 315 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 HLA-DRB4X5D2U9 266 aa13.81□□□□□ -0.2
MCF2L-230ENST00000491028 F6UB75 175 aa13.8□□□□□ -0.2
MCF2L-230ENST00000491028 DUSP14O95147 198 aaKnown RBP13.8□□□□□ -0.2
MCF2L-230ENST00000491028 GOLT1AQ6ZVE7 132 aa13.8□□□□□ -0.2
MCF2L-230ENST00000491028 C11orf52Q96A22 123 aa13.8□□□□□ -0.2
MCF2L-230ENST00000491028 WFDC10AQ9H1F0 79 aa13.8□□□□□ -0.2
MCF2L-230ENST00000491028 SMDT1Q9H4I9 107 aa13.8□□□□□ -0.2
MCF2L-230ENST00000491028 IGKV2-40A0A087WW87 121 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-230ENST00000491028 RAB19A4D1S5 217 aa13.79□□□□□ -0.2
MCF2L-230ENST00000491028 NPIPB6E9PJ23 425 aa13.79□□□□□ -0.2
MCF2L-230ENST00000491028 IGKV2D-40P01614 121 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-230ENST00000491028 DEFB1P60022 68 aa13.79□□□□□ -0.2
MCF2L-230ENST00000491028 HIST1H1AQ02539 215 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-230ENST00000491028 ZNF124Q15973 351 aa13.79□□□□□ -0.2
MCF2L-230ENST00000491028 ACTL10Q5JWF8 245 aa13.79□□□□□ -0.2
MCF2L-230ENST00000491028 GDF5OSQ5U4N7 250 aa13.79□□□□□ -0.2
MCF2L-230ENST00000491028 NBEAL1Q6ZS30 2694 aa13.79□□□□□ -0.2
MCF2L-230ENST00000491028 SCO2A0A1W2PP80 73 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 FBLL1A6NHQ2 334 aaKnown RBP13.78□□□□□ -0.2
MCF2L-230ENST00000491028 KNCNA6PVL3 124 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 A8MTW9 85 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 TMEM250H0YL14 139 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 H3BMM0 161 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 PEA15Q15121 130 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 C9orf47Q6ZRZ4 202 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 STHQ8IWL8 128 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 DEFB125Q8N687 156 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 TMEM75Q8N9X5 138 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 CLUHP3Q96NS8 147 aa13.78□□□□□ -0.2
MCF2L-230ENST00000491028 LINC00862A6NCI5 91 aa13.77□□□□□ -0.21
MCF2L-230ENST00000491028 AKR1C3P42330 323 aa13.77□□□□□ -0.21
MCF2L-230ENST00000491028 CNN1P51911 297 aaKnown RBP13.77□□□□□ -0.21
MCF2L-230ENST00000491028 TMEM78Q5T7P6 136 aa13.77□□□□□ -0.21
MCF2L-230ENST00000491028 C2CD4CQ8TF44 421 aa13.77□□□□□ -0.21
MCF2L-230ENST00000491028 LINC00477Q96M19 166 aa13.77□□□□□ -0.21
MCF2L-230ENST00000491028 CITED4Q96RK1 184 aa13.77□□□□□ -0.21
MCF2L-230ENST00000491028 SRD5A3Q9H8P0 318 aa13.77□□□□□ -0.21
MCF2L-230ENST00000491028 MGAM2Q2M2H8 2515 aa13.77□□□□□ -0.21
MCF2L-230ENST00000491028 ZNF705DP0CH99 300 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-230ENST00000491028 ZNF705BP0CI00 300 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-230ENST00000491028 TRPT1Q86TN4 253 aaKnown RBP13.76□□□□□ -0.21
MCF2L-230ENST00000491028 AURKAIP1Q9NWT8 199 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-230ENST00000491028 A8MZ25 164 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 S100A9P06702 114 aaKnown RBP13.75□□□□□ -0.21
MCF2L-230ENST00000491028 PRB4P10163 310 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms