RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ZNF562Q6V9R5 426 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 VSTM5A8MXK1 200 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 DLL1O00548 723 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 NDUFA3O95167 84 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 PRCDQ00LT1 54 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 RIGQ13278 110 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 LYZL1Q6UWQ5 148 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 GAGE5Q13069 117 aa12.87□□□□□ -0.35
MCF2L-229ENST00000488765 GAGE6Q13070 117 aa12.87□□□□□ -0.35
MCF2L-229ENST00000488765 CCDC179H3BU77 68 aa12.87□□□□□ -0.35
MCF2L-229ENST00000488765 LEPP41159 167 aa12.87□□□□□ -0.35
MCF2L-229ENST00000488765 SMCPP49901 116 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-229ENST00000488765 MRPL32Q9BYC8 188 aaKnown RBP12.87□□□□□ -0.35
MCF2L-229ENST00000488765 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
MCF2L-229ENST00000488765 TMEM8BA6NDV4 472 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 ZNF785A8K8V0 405 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 M0R3E3 92 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 PRO0461Q9UI25 63 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 WI2-2373I1.2A0A1W2PRP0 233 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 PRTN3P24158 256 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 PRB3Q04118 309 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-229ENST00000488765 PPP1R35Q8TAP8 253 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 DEFB104AQ8WTQ1 72 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 HHLA3Q9XRX5 114 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 DNPH1O43598 174 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 BRI3O95415 125 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
MCF2L-229ENST00000488765 WT1-ASQ06250 92 aa12.85□□□□□ -0.35
MCF2L-229ENST00000488765 FAM90A1Q86YD7 464 aa12.85□□□□□ -0.35
MCF2L-229ENST00000488765 CALYQ9NYX4 217 aa12.85□□□□□ -0.35
MCF2L-229ENST00000488765 IGKV1D-17A0A075B6S4 117 aa12.85□□□□□ -0.35
MCF2L-229ENST00000488765 UPK2O00526 184 aa12.85□□□□□ -0.35
MCF2L-229ENST00000488765 LYZP61626 148 aa12.85□□□□□ -0.35
MCF2L-229ENST00000488765 TWIST1Q15672 202 aa12.85□□□□□ -0.35
MCF2L-229ENST00000488765 TTC9CQ8N5M4 171 aa12.85□□□□□ -0.35
MCF2L-229ENST00000488765 IGKV1D-37A0A075B6S9 117 aa12.84□□□□□ -0.35
MCF2L-229ENST00000488765 MRPL51Q4U2R6 128 aaKnown RBP12.84□□□□□ -0.35
MCF2L-229ENST00000488765 Q86TA4 180 aa12.84□□□□□ -0.35
MCF2L-229ENST00000488765 MYCNOSP40205 109 aa12.84□□□□□ -0.35
MCF2L-229ENST00000488765 ERHP84090 104 aaKnown RBP12.84□□□□□ -0.35
MCF2L-229ENST00000488765 ORMDL3Q8N138 153 aa12.84□□□□□ -0.35
MCF2L-229ENST00000488765 KLK15Q9H2R5 256 aa12.84□□□□□ -0.35
MCF2L-229ENST00000488765 RBP4P02753 201 aa12.84□□□□□ -0.35
MCF2L-229ENST00000488765 IGHV3-72A0A0B4J1Y9 119 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 FAM90A9PA6NNJ1 464 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 CLEC3BP05452 202 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 CRIP1P50238 77 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 FMC1Q96HJ9 113 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 HARBI1Q96MB7 349 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 HIF1ANQ9NWT6 349 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 SOX21Q9Y651 276 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-229ENST00000488765 RPL32P62910 135 aaKnown RBP12.83□□□□□ -0.36
MCF2L-229ENST00000488765 TEX29Q8N6K0 151 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 KLF12Q9Y4X4 402 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 FSTL3O95633 263 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 IGKCP01834 107 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 DIAPH2-AS1Q14236 149 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 RRN3P1Q2M238 152 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 SLC25A48Q6ZT89 311 aaKnown RBP12.83□□□□□ -0.36
MCF2L-229ENST00000488765 TMEM75Q8N9X5 138 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 OR11H2Q8NH07 326 aa12.83□□□□□ -0.36
MCF2L-229ENST00000488765 C2orf83Q53S99 150 aa12.82□□□□□ -0.36
MCF2L-229ENST00000488765 MRPL35Q9NZE8 188 aaKnown RBP12.82□□□□□ -0.36
MCF2L-229ENST00000488765 S4R3C0 116 aa12.82□□□□□ -0.36
MCF2L-229ENST00000488765 PCSK5Q92824 1860 aa12.82□□□□□ -0.36
MCF2L-229ENST00000488765 OVOL3O00110 214 aa12.82□□□□□ -0.36
MCF2L-229ENST00000488765 ODF1Q14990 250 aa12.82□□□□□ -0.36
MCF2L-229ENST00000488765 Q6AWC8 147 aa12.82□□□□□ -0.36
MCF2L-229ENST00000488765 ZNF492Q9P255 531 aa12.82□□□□□ -0.36
MCF2L-229ENST00000488765 CTSZQ9UBR2 303 aa12.82□□□□□ -0.36
MCF2L-229ENST00000488765 LINC01549A6NIU2 74 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 ID1P41134 155 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 CARD19Q96LW7 228 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 TPSG1Q9NRR2 321 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 DEFB109BQ30KR1 87 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 FDCSPQ8NFU4 85 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 AJUBAQ96IF1 538 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 ZFAND6Q6FIF0 208 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 DPF1Q92782 380 aa12.81□□□□□ -0.36
MCF2L-229ENST00000488765 TRGV5A0A0B4J1U4 118 aa12.8□□□□□ -0.36
MCF2L-229ENST00000488765 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
MCF2L-229ENST00000488765 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
MCF2L-229ENST00000488765 IGFL4Q6B9Z1 124 aa12.8□□□□□ -0.36
MCF2L-229ENST00000488765 ZNF502Q8TBZ5 544 aa12.8□□□□□ -0.36
MCF2L-229ENST00000488765 GFRA4Q9GZZ7 299 aa12.8□□□□□ -0.36
MCF2L-229ENST00000488765 IGLV2-11P01706 119 aa12.79□□□□□ -0.36
MCF2L-229ENST00000488765 WT1P19544 449 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-229ENST00000488765 KLRD1Q13241 179 aa12.79□□□□□ -0.36
MCF2L-229ENST00000488765 FAM104BQ5XKR9 115 aa12.79□□□□□ -0.36
MCF2L-229ENST00000488765 ZNF714Q96N38 554 aa12.79□□□□□ -0.36
MCF2L-229ENST00000488765 MAP1AP78559 2803 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-229ENST00000488765 NHLRC4P0CG21 123 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-229ENST00000488765 CT83Q5H943 113 aa12.79□□□□□ -0.36
MCF2L-229ENST00000488765 KLF17Q5JT82 389 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-229ENST00000488765 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
MCF2L-229ENST00000488765 MOGAT3Q86VF5 341 aa12.79□□□□□ -0.36
MCF2L-229ENST00000488765 DSCAMO60469 2012 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms