RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 RITA1Q96K30 269 aa11.25□□□□□ -0.61
RER1-207ENST00000488353 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
RER1-207ENST00000488353 TPSG1Q9NRR2 321 aa11.25□□□□□ -0.61
RER1-207ENST00000488353 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
RER1-207ENST00000488353 HOXB4P17483 251 aaPredicted RBP11.25□□□□□ -0.61
RER1-207ENST00000488353 TNFRSF1AP19438 455 aa11.25□□□□□ -0.61
RER1-207ENST00000488353 FXYD2P54710 66 aa11.25□□□□□ -0.61
RER1-207ENST00000488353 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
RER1-207ENST00000488353 U3KQK5 164 aa11.25□□□□□ -0.61
RER1-207ENST00000488353 TPRP12270 2363 aaKnown RBP11.24□□□□□ -0.61
RER1-207ENST00000488353 FBLL1A6NHQ2 334 aaKnown RBP11.24□□□□□ -0.61
RER1-207ENST00000488353 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 C17orf100A8MU93 164 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 ENSAO43768 121 aaKnown RBP11.24□□□□□ -0.61
RER1-207ENST00000488353 SLC25A17O43808 307 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 CRYGCP07315 174 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 OR4C13Q8NGP0 309 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
RER1-207ENST00000488353 RAXQ9Y2V3 346 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 IGHV3-21A0A0B4J1V1 117 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 PRB3Q04118 309 aaPredicted RBP11.24□□□□□ -0.61
RER1-207ENST00000488353 HCP5Q6MZN7 132 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
RER1-207ENST00000488353 RAB9AP51151 201 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 DLX1P56177 255 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 SCGB2A2Q13296 93 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 Q5PR19 223 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 MSRB2Q9Y3D2 182 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 NDUFS7O75251 213 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 CKS1BP61024 79 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 PAX8Q06710 450 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 FAM104BQ5XKR9 115 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 CCDC144NLQ6NUI1 221 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 EXOC3-AS1Q8N2X6 119 aa11.23□□□□□ -0.61
RER1-207ENST00000488353 PHLDA1Q8WV24 401 aaPredicted RBP11.23□□□□□ -0.61
RER1-207ENST00000488353 IGLV2-23P01705 113 aa11.22□□□□□ -0.61
RER1-207ENST00000488353 FXYD7P58549 80 aa11.22□□□□□ -0.61
RER1-207ENST00000488353 Q71RC1 249 aaPredicted RBP11.22□□□□□ -0.61
RER1-207ENST00000488353 TMEM190Q8WZ59 177 aa11.22□□□□□ -0.61
RER1-207ENST00000488353 TMEM14CQ9P0S9 112 aa11.22□□□□□ -0.61
RER1-207ENST00000488353 DKK2Q9UBU2 259 aa11.22□□□□□ -0.61
RER1-207ENST00000488353 HIGD1AQ9Y241 93 aa11.22□□□□□ -0.61
RER1-207ENST00000488353 LRBAP50851 2863 aa11.22□□□□□ -0.61
RER1-207ENST00000488353 NDUFB3O43676 98 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 WFDC2Q14508 124 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 CHAC1Q9BUX1 264 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 NCOR2Q9Y618 2525 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 A0A1W2PPI3 338 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 A0A1W2PRD5 423 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 A0A1W2PRF3 423 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 A0A1W2PRM7 423 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 SHISA9B4DS77 424 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 E9PLD3 99 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 TMEM178BH3BS89 294 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 K7EQM0 130 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 TCTEX1D4Q5JR98 221 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 TM2D2Q9BX73 214 aa11.21□□□□□ -0.61
RER1-207ENST00000488353 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.62
RER1-207ENST00000488353 K7ERJ3 54 aa11.2□□□□□ -0.62
RER1-207ENST00000488353 AMN1Q8IY45 258 aa11.2□□□□□ -0.62
RER1-207ENST00000488353 CTSZQ9UBR2 303 aa11.2□□□□□ -0.62
RER1-207ENST00000488353 C18orf15Q96N68 181 aa11.2□□□□□ -0.62
RER1-207ENST00000488353 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
RER1-207ENST00000488353 NHP2Q9NX24 153 aaKnown RBP11.2□□□□□ -0.62
RER1-207ENST00000488353 CNTFRP26992 372 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 CEND1Q8N111 149 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 COL6A6A6NMZ7 2263 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 ABCA4P78363 2273 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 CRIP1P50238 77 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 MRPL51Q4U2R6 128 aaKnown RBP11.19□□□□□ -0.62
RER1-207ENST00000488353 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 LYZL1Q6UWQ5 148 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 SLC25A39Q9BZJ4 359 aaPredicted RBP11.19□□□□□ -0.62
RER1-207ENST00000488353 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
RER1-207ENST00000488353 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 IGKV2D-26A0A0A0MRZ7 120 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 TMEM213A2RRL7 107 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 E7EQL1 145 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 GRNP28799 593 aaKnown RBP11.18□□□□□ -0.62
RER1-207ENST00000488353 SRSF1Q07955 248 aaKnown RBP eCLIP11.18□□□□□ -0.62
RER1-207ENST00000488353 VMA21Q3ZAQ7 101 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 LINC01560Q8TB33 94 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 VKORC1Q9BQB6 163 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 ZMAT4Q9H898 229 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 FAM90A27PA6NNH2 459 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 VSTM5A8MXK1 200 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 IGLL5B9A064 214 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 LOXP28300 417 aaPredicted RBP11.18□□□□□ -0.62
RER1-207ENST00000488353 CKS2P33552 79 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 LYZP61626 148 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 MRGPRG-AS1Q2M3A8 158 aa11.18□□□□□ -0.62
RER1-207ENST00000488353 ANKHD1Q8IWZ3 2542 aaKnown RBP11.18□□□□□ -0.62
RER1-207ENST00000488353 SH2D6Q7Z4S9 175 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms