RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 OR5C1Q8NGR4 320 aa9.99□□□□□ -0.81
VARS-225ENST00000482996 RPUSD4Q96CM3 377 aaKnown RBP9.99□□□□□ -0.81
VARS-225ENST00000482996 ARPC5LQ9BPX5 153 aa9.99□□□□□ -0.81
VARS-225ENST00000482996 ZNF331Q9NQX6 463 aaPredicted RBP9.99□□□□□ -0.81
VARS-225ENST00000482996 CELA1Q9UNI1 258 aa9.99□□□□□ -0.81
VARS-225ENST00000482996 BORCS7-ASMTA0A0B4J1R7 106 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 TEX48A0A1B0GUV7 120 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 RNF222A6NCQ9 220 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 IGLL5B9A064 214 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 BCL2L11O43521 198 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 SPART-AS1P0CW21 52 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 EMP1P54849 157 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 GUK1Q16774 197 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 SPINK13Q1W4C9 94 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 RRN3P1Q2M238 152 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 MORN5Q5VZ52 161 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
VARS-225ENST00000482996 ZNF471Q9BX82 626 aaPredicted RBP9.98□□□□□ -0.81
VARS-225ENST00000482996 M0R2Z0 102 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 SNRPCP09234 159 aaKnown RBP9.97□□□□□ -0.81
VARS-225ENST00000482996 IGLC2P0DOY2 106 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 ZNF266Q14584 549 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 CLINT1Q14677 625 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 LGALSLQ3ZCW2 172 aaPredicted RBP9.97□□□□□ -0.81
VARS-225ENST00000482996 LGALS9CQ6DKI2 356 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 NPCDR1Q9BY65 106 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 SMIM3Q9BZL3 60 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
VARS-225ENST00000482996 DEFB131BA0A096LNP1 70 aa9.96□□□□□ -0.82
VARS-225ENST00000482996 TRAV5A0A0B4J249 113 aa9.96□□□□□ -0.82
VARS-225ENST00000482996 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
VARS-225ENST00000482996 H3BTX0 84 aa9.96□□□□□ -0.82
VARS-225ENST00000482996 IFNA5P01569 189 aa9.96□□□□□ -0.82
VARS-225ENST00000482996 ZNF767PQ75MW2 155 aa9.96□□□□□ -0.82
VARS-225ENST00000482996 HYDINQ4G0P3 5121 aa9.95□□□□□ -0.82
VARS-225ENST00000482996 H3BQ15 152 aa9.95□□□□□ -0.82
VARS-225ENST00000482996 SLC17A3O00476 420 aa9.95□□□□□ -0.82
VARS-225ENST00000482996 TPT1P13693 172 aaKnown RBP9.95□□□□□ -0.82
VARS-225ENST00000482996 SLC51BQ86UW2 128 aa9.95□□□□□ -0.82
VARS-225ENST00000482996 BAP18Q8IXM2 172 aa9.95□□□□□ -0.82
VARS-225ENST00000482996 OR10J6PQ8NGY7 276 aa9.95□□□□□ -0.82
VARS-225ENST00000482996 SAT2Q96F10 170 aaPredicted RBP9.95□□□□□ -0.82
VARS-225ENST00000482996 DKK2Q9UBU2 259 aa9.95□□□□□ -0.82
VARS-225ENST00000482996 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
VARS-225ENST00000482996 C17orf112F2Z3M2 114 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 CRXO43186 299 aaPredicted RBP9.94□□□□□ -0.82
VARS-225ENST00000482996 ZNF253O75346 499 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 FAM222AQ5U5X8 452 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 EIF5AL1Q6IS14 154 aaKnown RBP9.94□□□□□ -0.82
VARS-225ENST00000482996 TMEM256Q8N2U0 113 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 SCGB1C1Q8TD33 95 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 ATP5SQ99766 215 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 WDR61Q9GZS3 305 aaKnown RBP9.94□□□□□ -0.82
VARS-225ENST00000482996 TMEM14CQ9P0S9 112 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 APLNQ9ULZ1 77 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 VPS13DQ5THJ4 4388 aa9.94□□□□□ -0.82
VARS-225ENST00000482996 IGHV4-4A0A075B6R2 117 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 TRAV12-2A0A075B6T6 113 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 HIST1H1EP10412 219 aaKnown RBP9.93□□□□□ -0.82
VARS-225ENST00000482996 TSPOP30536 169 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 CDKN1BP46527 198 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 GCSAMLQ5JQS6 135 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 LINC01587Q99440 93 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 NIPSNAP3BQ9BS92 247 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 ZNF586Q9NXT0 402 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 YTHDF2Q9Y5A9 579 aaKnown RBP9.93□□□□□ -0.82
VARS-225ENST00000482996 TIMM9Q9Y5J7 89 aa9.93□□□□□ -0.82
VARS-225ENST00000482996 TRBV19A0A075B6N1 114 aa9.92□□□□□ -0.82
VARS-225ENST00000482996 ZNF705GA8MUZ8 300 aaPredicted RBP9.92□□□□□ -0.82
VARS-225ENST00000482996 PRAC2D3DTV9 90 aa9.92□□□□□ -0.82
VARS-225ENST00000482996 IFNA7P01567 189 aa9.92□□□□□ -0.82
VARS-225ENST00000482996 PRB4P10163 310 aaPredicted RBP9.92□□□□□ -0.82
VARS-225ENST00000482996 PDE6HQ13956 83 aa9.92□□□□□ -0.82
VARS-225ENST00000482996 MRPL53Q96EL3 112 aaKnown RBP9.92□□□□□ -0.82
VARS-225ENST00000482996 PRELID1Q9Y255 219 aa9.92□□□□□ -0.82
VARS-225ENST00000482996 PYYP10082 97 aa9.91□□□□□ -0.82
VARS-225ENST00000482996 TAS2R60P59551 318 aa9.91□□□□□ -0.82
VARS-225ENST00000482996 DAD1P61803 113 aa9.91□□□□□ -0.82
VARS-225ENST00000482996 RPP25LQ8N5L8 163 aaKnown RBP9.91□□□□□ -0.82
VARS-225ENST00000482996 BLNKQ8WV28 456 aa9.91□□□□□ -0.82
VARS-225ENST00000482996 NDUFAF3Q9BU61 184 aa9.91□□□□□ -0.82
VARS-225ENST00000482996 MRPL32Q9BYC8 188 aaKnown RBP9.91□□□□□ -0.82
VARS-225ENST00000482996 KMT2AQ03164 3969 aa9.91□□□□□ -0.82
VARS-225ENST00000482996 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
VARS-225ENST00000482996 LEPP41159 167 aa9.9□□□□□ -0.82
VARS-225ENST00000482996 RPL7L1Q6DKI1 246 aaKnown RBP9.9□□□□□ -0.82
VARS-225ENST00000482996 MIR17HGQ75NE6 70 aa9.9□□□□□ -0.82
VARS-225ENST00000482996 HSD17B11Q8NBQ5 300 aa9.9□□□□□ -0.82
VARS-225ENST00000482996 GNPNAT1Q96EK6 184 aaPredicted RBP9.9□□□□□ -0.82
VARS-225ENST00000482996 ODF3Q96PU9 254 aa9.9□□□□□ -0.82
VARS-225ENST00000482996 C20orf144Q9BQM9 153 aa9.9□□□□□ -0.82
VARS-225ENST00000482996 SLC25A2Q9BXI2 301 aa9.9□□□□□ -0.82
VARS-225ENST00000482996 AAMDCQ9H7C9 122 aa9.9□□□□□ -0.82
VARS-225ENST00000482996 NPIPB6E9PJ23 425 aa9.89□□□□□ -0.83
VARS-225ENST00000482996 H7BYZ3 331 aa9.89□□□□□ -0.83
VARS-225ENST00000482996 NDUFB4O95168 129 aa9.89□□□□□ -0.83
VARS-225ENST00000482996 PRM2P04554 102 aa9.89□□□□□ -0.83
VARS-225ENST00000482996 HTN1P15515 57 aa9.89□□□□□ -0.83
VARS-225ENST00000482996 HTN3P15516 51 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms