RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 SLC25A22Q9H936 323 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 EDA2RQ9HAV5 297 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 CYTL1Q9NRR1 136 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 ZNF586Q9NXT0 402 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 TP53TG3Q9ULZ0 132 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 C3orf84H3BNL1 204 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 H3BQ15 152 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 SPRY2O43597 315 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 NDUFB4O95168 129 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 PRB2P02812 416 aaPredicted RBP3.72□□□□□ -1.81
HDAC6-223ENST00000480525 GIG44P09565 113 aaPredicted RBP3.72□□□□□ -1.81
HDAC6-223ENST00000480525 TAGLN2P37802 199 aaKnown RBP3.72□□□□□ -1.81
HDAC6-223ENST00000480525 TCTAP57738 103 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 MORN5Q5VZ52 161 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 RPL7L1Q6DKI1 246 aaKnown RBP3.72□□□□□ -1.81
HDAC6-223ENST00000480525 GBGT1Q8N5D6 347 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 FAM24BQ8N5W8 94 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 OR11H4Q8NGC9 324 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 OR8A1Q8NGG7 326 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 RNF141Q8WVD5 230 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 MBD3L1Q8WWY6 194 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 RAB24Q969Q5 203 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 ZNF503Q96F45 646 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 FAM19A4Q96LR4 140 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 IGF2BP2-AS1Q96M15 143 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 LINC00477Q96M19 166 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 OVOL2Q9BRP0 275 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 PAXXQ9BUH6 204 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 ACTR3CQ9C0K3 210 aaPredicted RBP3.72□□□□□ -1.81
HDAC6-223ENST00000480525 OTORQ9NRC9 128 aa3.72□□□□□ -1.81
HDAC6-223ENST00000480525 IGHV3-66A0A0C4DH42 116 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 TRBV6-1A0A0K0K1D8 114 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 KLLNB2CW77 178 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 BOLA2-SMG1P6H3BVE0 249 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 OR7C2O60412 319 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 CDKN1BP46527 198 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 CNN1P51911 297 aaKnown RBP3.71□□□□□ -1.82
HDAC6-223ENST00000480525 UBE2L3P68036 154 aaKnown RBP3.71□□□□□ -1.82
HDAC6-223ENST00000480525 GCSAMLQ5JQS6 135 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 AKR1C8PQ5T2L2 129 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 LEMD1Q68G75 181 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF493Q6ZR52 646 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 MIR17HGQ75NE6 70 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 COX8CQ7Z4L0 72 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 C5orf17Q8NAS9 161 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 HSD17B11Q8NBQ5 300 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 OR10J6PQ8NGY7 276 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 LRRC20Q8TCA0 184 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 HIST1H2BAQ96A08 127 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 RPUSD4Q96CM3 377 aaKnown RBP3.71□□□□□ -1.82
HDAC6-223ENST00000480525 C18orf15Q96N68 181 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 NDUFAF3Q9BU61 184 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 SMIM3Q9BZL3 60 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 WFDC10AQ9H1F0 79 aa3.71□□□□□ -1.82
HDAC6-223ENST00000480525 TEX46H3BTG2 121 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 H7BYZ3 331 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 K7EQM0 130 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 SLC17A3O00476 420 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 HMGB3O15347 200 aaKnown RBP3.7□□□□□ -1.82
HDAC6-223ENST00000480525 CRXO43186 299 aaPredicted RBP3.7□□□□□ -1.82
HDAC6-223ENST00000480525 PFDN1O60925 122 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 CA1P00915 261 aaPredicted RBP3.7□□□□□ -1.82
HDAC6-223ENST00000480525 INSP01308 110 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 ARL14EPLP0DKL9 152 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 GCHFRP30047 84 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 LEPP41159 167 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 CSN1S1P47710 185 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 TFPI2P48307 235 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 RAB2AP61019 212 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 TDRG1Q3Y452 100 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 ZFP69Q49AA0 526 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 ACTL10Q5JWF8 245 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 TMUB2Q71RG4 321 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 C9orf62Q8N4C0 152 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 Q8NAQ8 132 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF738Q8NE65 137 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 LYPD6BQ8NI32 183 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 SMIM12Q96EX1 92 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 FAM210BQ96KR6 192 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 C20orf173Q96LM9 149 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 PYGO2Q9BRQ0 406 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 UBQLN2Q9UHD9 624 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 GOLT1BQ9Y3E0 138 aa3.7□□□□□ -1.82
HDAC6-223ENST00000480525 MUC4Q99102 2169 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 IGKV3-7A0A075B6H7 116 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 TRAV5A0A0B4J249 113 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 DIRC3C9JPN6 131 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 C11orf94C9JXX5 98 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 HBE1P02100 147 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 S100A9P06702 114 aaKnown RBP3.69□□□□□ -1.82
HDAC6-223ENST00000480525 PYYP10082 97 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 SULT1A2P50226 295 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 TAS2R60P59551 318 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 DEFB135Q30KP9 77 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 ANXA2RQ3ZCQ2 193 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 PIK3CD-AS1Q5SR53 167 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 IBA57Q5T440 356 aaKnown RBP3.69□□□□□ -1.82
HDAC6-223ENST00000480525 TMEM78Q5T7P6 136 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 GDF5OSQ5U4N7 250 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 Q6AWC8 147 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms