RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 Q6ZRG5 221 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 LINC00612Q8N6U2 182 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 ZBTB8BQ8NAP8 495 aaPredicted RBP9.2□□□□□ -0.94
VCL-205ENST00000478896 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 MGST2Q99735 147 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 GGACTQ9BVM4 153 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 Q9H3A6 140 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 CENPXA8MT69 81 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 HOXA5P20719 270 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 BCAP31P51572 246 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 ARL16Q0P5N6 197 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 RAB31Q13636 194 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 BAK1Q16611 211 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 MORN5Q5VZ52 161 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 TMEM37Q8WXS4 190 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 UPK3BQ9BT76 320 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 KRTAP1-5Q9BYS1 174 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 TMPRSS5Q9H3S3 457 aa9.19□□□□□ -0.94
VCL-205ENST00000478896 HSPG2P98160 4391 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 TRGV2A0A075B6R0 118 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 A0A1W2PPQ1 181 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 C7orf66A4D0T2 115 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 IGLC2P0DOY2 106 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 CAMLGP49069 296 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 ZNF846Q147U1 533 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 ESRGQ1W209 222 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 ODF3Q96PU9 254 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 PYGO2Q9BRQ0 406 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 ZNF586Q9NXT0 402 aa9.18□□□□□ -0.94
VCL-205ENST00000478896 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
VCL-205ENST00000478896 LSM5Q9Y4Y9 91 aaKnown RBP9.18□□□□□ -0.94
VCL-205ENST00000478896 FAM25EA8MYX2 175 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 H3BNG1 76 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 H3BQ15 152 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 CCSO14618 274 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 MBPP02686 304 aaPredicted RBP9.17□□□□□ -0.94
VCL-205ENST00000478896 CT45A10P0DMU9 189 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 CAV2P51636 162 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 GUK1Q16774 197 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 MIC13Q5XKP0 118 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 NRARPQ7Z6K4 114 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 Q8N1X5 172 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 OR1L4Q8NGR5 311 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 MITD1Q8WV92 249 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 DNAJC4Q9NNZ3 241 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
VCL-205ENST00000478896 TRAV5A0A0B4J249 113 aa9.16□□□□□ -0.94
VCL-205ENST00000478896 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
VCL-205ENST00000478896 BTCP35070 178 aa9.16□□□□□ -0.94
VCL-205ENST00000478896 DAZ2Q13117 558 aaKnown RBP9.16□□□□□ -0.94
VCL-205ENST00000478896 Q6ZTI0 123 aa9.16□□□□□ -0.94
VCL-205ENST00000478896 ZNF680Q8NEM1 530 aa9.16□□□□□ -0.94
VCL-205ENST00000478896 ZNF431Q8TF32 576 aaPredicted RBP9.16□□□□□ -0.94
VCL-205ENST00000478896 SAT2Q96F10 170 aaPredicted RBP9.16□□□□□ -0.94
VCL-205ENST00000478896 PFDN5Q99471 154 aa9.16□□□□□ -0.94
VCL-205ENST00000478896 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
VCL-205ENST00000478896 UBE2L5PA0A1B0GUS4 154 aa9.15□□□□□ -0.94
VCL-205ENST00000478896 CST7O76096 145 aa9.15□□□□□ -0.94
VCL-205ENST00000478896 SLC25A5P05141 298 aaKnown RBP9.15□□□□□ -0.94
VCL-205ENST00000478896 BTF3P20290 206 aaKnown RBP9.15□□□□□ -0.94
VCL-205ENST00000478896 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
VCL-205ENST00000478896 BAXQ07812 192 aa9.15□□□□□ -0.94
VCL-205ENST00000478896 C20orf85Q9H1P6 137 aa9.15□□□□□ -0.94
VCL-205ENST00000478896 GSN-AS1Q9NRJ2 163 aa9.15□□□□□ -0.94
VCL-205ENST00000478896 UQCC1Q9NVA1 299 aa9.15□□□□□ -0.94
VCL-205ENST00000478896 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
VCL-205ENST00000478896 C7orf71A4D174 169 aa9.14□□□□□ -0.95
VCL-205ENST00000478896 C5orf51A6NDU8 294 aa9.14□□□□□ -0.95
VCL-205ENST00000478896 ZNF253O75346 499 aa9.14□□□□□ -0.95
VCL-205ENST00000478896 PVALBP20472 110 aaPredicted RBP9.14□□□□□ -0.95
VCL-205ENST00000478896 LINC00315P59091 139 aa9.14□□□□□ -0.95
VCL-205ENST00000478896 ERCC8Q13216 396 aa9.14□□□□□ -0.95
VCL-205ENST00000478896 CNPY1Q3B7I2 92 aa9.14□□□□□ -0.95
VCL-205ENST00000478896 C12orf45Q8N5I9 185 aaPredicted RBP9.14□□□□□ -0.95
VCL-205ENST00000478896 FUT9Q9Y231 359 aa9.14□□□□□ -0.95
VCL-205ENST00000478896 A0A096LPF7 62 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 FAM24AA6NFZ4 105 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 M0R3E3 92 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 IL7P13232 177 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 S100A10P60903 97 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 BTN1A1Q13410 526 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 EIF4E3Q8N5X7 224 aaKnown RBP9.13□□□□□ -0.95
VCL-205ENST00000478896 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
VCL-205ENST00000478896 VSIG2Q96IQ7 327 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 SDHCQ99643 169 aaPredicted RBP9.13□□□□□ -0.95
VCL-205ENST00000478896 RBM38Q9H0Z9 239 aaKnown RBP9.13□□□□□ -0.95
VCL-205ENST00000478896 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 WDR83OSQ9Y284 106 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 TIMM9Q9Y5J7 89 aa9.13□□□□□ -0.95
VCL-205ENST00000478896 TRBV19A0A075B6N1 114 aa9.12□□□□□ -0.95
VCL-205ENST00000478896 SIVA1O15304 175 aa9.12□□□□□ -0.95
VCL-205ENST00000478896 RPL29P47914 159 aaKnown RBP9.12□□□□□ -0.95
VCL-205ENST00000478896 STX12Q86Y82 276 aa9.12□□□□□ -0.95
VCL-205ENST00000478896 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
VCL-205ENST00000478896 BLNKQ8WV28 456 aa9.12□□□□□ -0.95
VCL-205ENST00000478896 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
VCL-205ENST00000478896 PTTG2Q9NZH5 202 aa9.12□□□□□ -0.95
VCL-205ENST00000478896 PRELID1Q9Y255 219 aa9.12□□□□□ -0.95
VCL-205ENST00000478896 ICOSQ9Y6W8 199 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms