RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 AURKAIP1Q9NWT8 199 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-211ENST00000476772 DIRC3C9JPN6 131 aa21.81■■□□□ 1.08
VEGFA-211ENST00000476772 C16orf92Q96LL3 132 aa21.81■■□□□ 1.08
VEGFA-211ENST00000476772 MLXQ9UH92 298 aa21.81■■□□□ 1.08
VEGFA-211ENST00000476772 C7orf77A4D0Y5 90 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 M0QZ24 198 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 CSN1S1P47710 185 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 GNG4P50150 75 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 TAS2R60P59551 318 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 UBE2G1P62253 170 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 TMEM183BQ1AE95 376 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 LINC01551Q86U37 167 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 KLF12Q9Y4X4 402 aa21.8■■□□□ 1.08
VEGFA-211ENST00000476772 NIPBLQ6KC79 2804 aaeCLIP21.79■■□□□ 1.083e-6■□□□□ 8.3
VEGFA-211ENST00000476772 SOCS3O14543 225 aa21.79■■□□□ 1.08
VEGFA-211ENST00000476772 RHEBQ15382 184 aa21.79■■□□□ 1.08
VEGFA-211ENST00000476772 ZNF705FA8MVS1 300 aaPredicted RBP21.79■■□□□ 1.08
VEGFA-211ENST00000476772 OCC1Q8TAD7 63 aa21.79■■□□□ 1.08
VEGFA-211ENST00000476772 RPS10P5Q9NQ39 176 aa21.79■■□□□ 1.08
VEGFA-211ENST00000476772 JMJD1CQ15652 2540 aa21.78■■□□□ 1.08
VEGFA-211ENST00000476772 TRAV8-1A0A0A6YYK1 113 aa21.78■■□□□ 1.08
VEGFA-211ENST00000476772 CSN3P07498 182 aa21.78■■□□□ 1.08
VEGFA-211ENST00000476772 FMC1Q96HJ9 113 aa21.78■■□□□ 1.08
VEGFA-211ENST00000476772 PRELID1Q9Y255 219 aa21.78■■□□□ 1.08
VEGFA-211ENST00000476772 LCN12Q6JVE5 192 aa21.77■■□□□ 1.08
VEGFA-211ENST00000476772 ARL6IP6Q8N6S5 226 aa21.77■■□□□ 1.08
VEGFA-211ENST00000476772 GBGT1Q8N5D6 347 aa21.76■■□□□ 1.07
VEGFA-211ENST00000476772 LY96Q9Y6Y9 160 aa21.76■■□□□ 1.07
VEGFA-211ENST00000476772 IGLV2-11P01706 119 aa21.75■■□□□ 1.07
VEGFA-211ENST00000476772 S100A9P06702 114 aaKnown RBP21.75■■□□□ 1.07
VEGFA-211ENST00000476772 IGKV2-40A0A087WW87 121 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-211ENST00000476772 K7EN84 100 aa21.75■■□□□ 1.07
VEGFA-211ENST00000476772 K7EQM0 130 aa21.75■■□□□ 1.07
VEGFA-211ENST00000476772 OVOL1O14753 267 aa21.75■■□□□ 1.07
VEGFA-211ENST00000476772 IGKV2D-40P01614 121 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-211ENST00000476772 IGLV2-8P01709 118 aa21.75■■□□□ 1.07
VEGFA-211ENST00000476772 TMEM75Q8N9X5 138 aa21.75■■□□□ 1.07
VEGFA-211ENST00000476772 C20orf173Q96LM9 149 aa21.75■■□□□ 1.07
VEGFA-211ENST00000476772 B4DEV8 164 aa21.74■■□□□ 1.07
VEGFA-211ENST00000476772 MAST4O15021 2626 aa21.74■■□□□ 1.07
VEGFA-211ENST00000476772 BAGE2Q86Y30 109 aa21.74■■□□□ 1.07
VEGFA-211ENST00000476772 NHLRC2Q8NBF2 726 aa21.74■■□□□ 1.07
VEGFA-211ENST00000476772 DCANP1Q8TF63 244 aa21.74■■□□□ 1.07
VEGFA-211ENST00000476772 MRPL53Q96EL3 112 aaKnown RBP21.74■■□□□ 1.07
VEGFA-211ENST00000476772 MS4A6AQ9H2W1 248 aa21.74■■□□□ 1.07
VEGFA-211ENST00000476772 CLEC5AQ9NY25 188 aa21.74■■□□□ 1.07
VEGFA-211ENST00000476772 SERTM2A0A1B0GWG4 89 aa21.73■■□□□ 1.07
VEGFA-211ENST00000476772 PRAC2D3DTV9 90 aa21.73■■□□□ 1.07
VEGFA-211ENST00000476772 PSG3Q16557 428 aa21.73■■□□□ 1.07
VEGFA-211ENST00000476772 Q86TA4 180 aa21.73■■□□□ 1.07
VEGFA-211ENST00000476772 ISOC2Q96AB3 205 aa21.73■■□□□ 1.07
VEGFA-211ENST00000476772 BTN1A1Q13410 526 aa21.72■■□□□ 1.07
VEGFA-211ENST00000476772 KRTAP24-1Q3LI83 254 aa21.72■■□□□ 1.07
VEGFA-211ENST00000476772 WFDC3Q8IUB2 231 aa21.72■■□□□ 1.07
VEGFA-211ENST00000476772 PRNTQ86SH4 94 aa21.72■■□□□ 1.07
VEGFA-211ENST00000476772 LTAP01374 205 aa21.71■■□□□ 1.07
VEGFA-211ENST00000476772 TFPI2P48307 235 aa21.71■■□□□ 1.07
VEGFA-211ENST00000476772 FLI1Q01543 452 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-211ENST00000476772 RNF212Q495C1 297 aa21.71■■□□□ 1.07
VEGFA-211ENST00000476772 TMEM88Q6PEY1 159 aa21.71■■□□□ 1.07
VEGFA-211ENST00000476772 CBLN2Q8IUK8 224 aa21.71■■□□□ 1.07
VEGFA-211ENST00000476772 DYNLRB2Q8TF09 96 aa21.71■■□□□ 1.07
VEGFA-211ENST00000476772 PSG8Q9UQ74 426 aa21.71■■□□□ 1.07
VEGFA-211ENST00000476772 TRBV6-1A0A0K0K1D8 114 aa21.7■■□□□ 1.06
VEGFA-211ENST00000476772 PRIMA1Q86XR5 153 aa21.7■■□□□ 1.06
VEGFA-211ENST00000476772 CITED1Q99966 193 aa21.7■■□□□ 1.06
VEGFA-211ENST00000476772 MGST1P10620 155 aaKnown RBP21.69■■□□□ 1.06
VEGFA-211ENST00000476772 OR5I1Q13606 314 aa21.69■■□□□ 1.06
VEGFA-211ENST00000476772 SAMD13Q5VXD3 122 aa21.69■■□□□ 1.06
VEGFA-211ENST00000476772 ZNF738Q8NE65 137 aa21.69■■□□□ 1.06
VEGFA-211ENST00000476772 VGLL1Q99990 258 aa21.69■■□□□ 1.06
VEGFA-211ENST00000476772 WNK1Q9H4A3 2382 aa21.69■■□□□ 1.06
VEGFA-211ENST00000476772 A0A087WWC5 75 aa21.69■■□□□ 1.06
VEGFA-211ENST00000476772 DNASE2O00115 360 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-211ENST00000476772 TSPAN4O14817 238 aa21.69■■□□□ 1.06
VEGFA-211ENST00000476772 ASCL2Q99929 193 aa21.69■■□□□ 1.06
VEGFA-211ENST00000476772 K7EQG2 157 aa21.67■■□□□ 1.06
VEGFA-211ENST00000476772 GCGP01275 180 aa21.67■■□□□ 1.06
VEGFA-211ENST00000476772 ID1P41134 155 aa21.67■■□□□ 1.06
VEGFA-211ENST00000476772 DEFB114Q30KQ6 69 aa21.67■■□□□ 1.06
VEGFA-211ENST00000476772 MLST8Q9BVC4 326 aa21.67■■□□□ 1.06
VEGFA-211ENST00000476772 MT-ND4LP03901 98 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 TMEM61Q8N0U2 210 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 FAM24BQ8N5W8 94 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 SMIM12Q96EX1 92 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 SFRP2Q96HF1 295 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 RBAKDNA6NC62 111 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 PF4P02776 101 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 ERCC8Q13216 396 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 SIGLEC8Q9NYZ4 499 aa21.66■■□□□ 1.06
VEGFA-211ENST00000476772 PAFAH1B2P68402 229 aa21.65■■□□□ 1.06
VEGFA-211ENST00000476772 RBPMS2Q6ZRY4 209 aaKnown RBP21.65■■□□□ 1.06
VEGFA-211ENST00000476772 DEFB1P60022 68 aa21.64■■□□□ 1.05
VEGFA-211ENST00000476772 TMEM183AQ8IXX5 376 aa21.64■■□□□ 1.05
VEGFA-211ENST00000476772 Q8TAT8 98 aa21.64■■□□□ 1.05
VEGFA-211ENST00000476772 SMCO4Q9NRQ5 59 aa21.64■■□□□ 1.05
VEGFA-211ENST00000476772 ZFP30Q9Y2G7 519 aa21.64■■□□□ 1.05
VEGFA-211ENST00000476772 FBLL1A6NHQ2 334 aaKnown RBP21.63■■□□□ 1.05
VEGFA-211ENST00000476772 CD300EQ496F6 205 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-211ENST00000476772 CTDSP1Q9GZU7 261 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms