RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 H2AFB2P0C5Z0 115 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 FGF7P21781 194 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 RAB32Q13637 225 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 GFI1BQ5VTD9 330 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 ZNF575Q86XF7 245 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 CCDC28AQ8IWP9 274 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 OR1L4Q8NGR5 311 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 RNASE8Q8TDE3 154 aaKnown RBP8.38□□□□□ -1.07
SMPD4-217ENST00000473720 TMEM263Q8WUH6 116 aaKnown RBP8.38□□□□□ -1.07
SMPD4-217ENST00000473720 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 PXMP4Q9Y6I8 212 aa8.38□□□□□ -1.07
SMPD4-217ENST00000473720 IGSF23A1L1A6 192 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 GAGE12BA1L429 117 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 GAGE7O76087 117 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 GAGE12FP0CL80 117 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 GAGE12GP0CL81 117 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 GAGE12IP0CL82 117 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 IGLC2P0DOY2 106 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 MED14OSP0DP75 135 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 CCL18P55774 89 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 PFDN5Q99471 154 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 GPN1Q9HCN4 374 aaPredicted RBP8.37□□□□□ -1.07
SMPD4-217ENST00000473720 SLC39A9Q9NUM3 307 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 ZNF586Q9NXT0 402 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 WDR83OSQ9Y284 106 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 BOLA1Q9Y3E2 137 aa8.37□□□□□ -1.07
SMPD4-217ENST00000473720 FAM240BA0A1B0GVZ2 78 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 SNURFLB1AK76 121 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 RLN2P04090 185 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 CT45A10P0DMU9 189 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 LEPP41159 167 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 SULT1A1P50225 295 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 ERCC8Q13216 396 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 STX12Q86Y82 276 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 TMEM252Q8N6L7 170 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 BLNKQ8WV28 456 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 SAT2Q96F10 170 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-217ENST00000473720 C11orf1Q9H5F2 150 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 LINC00588Q9Y4M8 146 aa8.36□□□□□ -1.07
SMPD4-217ENST00000473720 TRAV26-1A0A087WT03 109 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 M0R3E3 92 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 PYYP10082 97 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 S100A11P31949 105 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 FAM3BP58499 235 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-217ENST00000473720 HBG1P69891 147 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 HBG2P69892 147 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 TNP2Q05952 138 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 GUK1Q16774 197 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 SSX7Q7RTT5 188 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 ZNRF2Q8NHG8 242 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 GNPNAT1Q96EK6 184 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-217ENST00000473720 C20orf144Q9BQM9 153 aa8.35□□□□□ -1.07
SMPD4-217ENST00000473720 LYRM2Q9NU23 88 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-217ENST00000473720 FAT2Q9NYQ8 4349 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 DNAH2Q9P225 4427 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 NPIPB6E9PJ23 425 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 SIX6O95475 246 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 RPL29P47914 159 aaKnown RBP8.34□□□□□ -1.07
SMPD4-217ENST00000473720 LRRC37A5PQ49AS3 106 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 EXOC3-AS1Q8N2X6 119 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 C6orf223Q8N319 242 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 THAP6Q8TBB0 222 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 CCDC32Q9BV29 185 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 NDUFA13Q9P0J0 144 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 TIMM9Q9Y5J7 89 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 PKHD1P08F94 4074 aa8.34□□□□□ -1.07
SMPD4-217ENST00000473720 KIAA1109Q2LD37 5005 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 TRBV19A0A075B6N1 114 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 M6PRP20645 277 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 HOXA5P20719 270 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 NHLH2Q02577 135 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 BTN1A1Q13410 526 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 VWC2Q2TAL6 325 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 GCSAMLQ5JQS6 135 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 MZT2BQ6NZ67 158 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 TMPRSS5Q9H3S3 457 aa8.33□□□□□ -1.08
SMPD4-217ENST00000473720 IGKV2-40A0A087WW87 121 aaPredicted RBP8.32□□□□□ -1.08
SMPD4-217ENST00000473720 C7orf71A4D174 169 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 C16orf90A8MZG2 172 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 IGKV2D-40P01614 121 aaPredicted RBP8.32□□□□□ -1.08
SMPD4-217ENST00000473720 RNASE4P34096 147 aaKnown RBP8.32□□□□□ -1.08
SMPD4-217ENST00000473720 ICAM4Q14773 271 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 ATP6V1FQ16864 119 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 FAM122CQ6P4D5 195 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 Q6ZTI0 123 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 PYGO2Q9BRQ0 406 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 NPCDR1Q9BY65 106 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 Q9H8V8 135 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 GSN-AS1Q9NRJ2 163 aa8.32□□□□□ -1.08
SMPD4-217ENST00000473720 HERC2O95714 4834 aa8.31□□□□□ -1.08
SMPD4-217ENST00000473720 TRGV2A0A075B6R0 118 aa8.31□□□□□ -1.08
SMPD4-217ENST00000473720 ZNF253O75346 499 aa8.31□□□□□ -1.08
SMPD4-217ENST00000473720 NDUFB4O95168 129 aa8.31□□□□□ -1.08
SMPD4-217ENST00000473720 SLC25A5P05141 298 aaKnown RBP8.31□□□□□ -1.08
SMPD4-217ENST00000473720 GPX1P07203 203 aa8.31□□□□□ -1.08
SMPD4-217ENST00000473720 HIST1H1EP10412 219 aaKnown RBP8.31□□□□□ -1.08
SMPD4-217ENST00000473720 CD300CQ08708 224 aa8.31□□□□□ -1.08
SMPD4-217ENST00000473720 IL15RAQ13261 267 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms