RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ZNF660Q6AZW8 331 aaPredicted RBP2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 OTOSQ8NHW6 89 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 AQP10Q96PS8 301 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 IMMP2LQ96T52 175 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 SCRT1Q9BWW7 348 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 SMDT1Q9H4I9 107 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 BCL2L10Q9HD36 194 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 RPL26L1Q9UNX3 145 aaKnown RBP2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 AP4S1Q9Y587 144 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 DNMBPQ6XZF7 1577 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 AHDC1Q5TGY3 1603 aaPredicted RBP2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 DOCK8Q8NF50 2099 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 NUP98P52948 1817 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 KDM5DQ9BY66 1539 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 IGLV3-9A0A075B6K5 115 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 TRGV5A0A0B4J1U4 118 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 C7orf66A4D0T2 115 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 OOSP1A8MZH6 123 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 TMEM262E9PQX1 116 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 SDCBPO00560 298 aaPredicted RBP2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 YPEL1O60688 119 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 MSMBP08118 114 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 LINC00032P0C843 101 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 ZNF705BP0CI00 300 aaPredicted RBP2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 CRYGAP11844 174 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 SLC25A4P12235 298 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 FABP4P15090 132 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 RPL28P46779 137 aaKnown RBP2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 CIRBPQ14011 172 aaKnown RBP2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 DPPA3Q6W0C5 159 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 C2orf91Q6ZV80 131 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 OR5AS1Q8N127 324 aa2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 MRPS24Q96EL2 167 aaKnown RBP2.84□□□□□ -1.95
PRPF40A-206ENST00000471167 NUP205Q92621 2012 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 ANKRD12Q6UB98 2062 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 IGKV1OR2-108A0A075B7D4 117 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 A0A1W2PQD3 144 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 TIMM17BO60830 172 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 IGLC1P0CG04 106 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 IL7P13232 177 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 RPS10P46783 165 aaKnown RBP2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 XCL1P47992 114 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 SS18Q15532 418 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 MIC13Q5XKP0 118 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 LYZL2Q7Z4W2 148 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 Q8N2B8 174 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 CLEC2BQ92478 149 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 AQP3Q92482 292 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 LSM10Q969L4 123 aaKnown RBP2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 CHCHD1Q96BP2 118 aaKnown RBP2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 ATG5Q9H1Y0 275 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 TAS2R4Q9NYW5 299 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 RPRD2Q5VT52 1461 aaKnown RBP2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 TEX14Q8IWB6 1497 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 GLI3P10071 1580 aa2.83□□□□□ -1.96
PRPF40A-206ENST00000471167 TRPM1Q7Z4N2 1603 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 ARHGEF28Q8N1W1 1705 aaKnown RBP2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 BRWD3Q6RI45 1802 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 ANAPC1Q9H1A4 1944 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 MYH13Q9UKX3 1938 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 MUC21A0A0G2JKD1 596 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 LOC107986453A0A1B0GWG9 222 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 A8MUU9 505 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 ZNF736B4DX44 427 aaPredicted RBP2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 M0R2P5 195 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 ZNF737O75373 536 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 HYPMO75409 117 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 LHBP01229 141 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 SAA1P0DJI8 122 aaPredicted RBP2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 CCL4P13236 92 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 MPV17P39210 176 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 UBE2SQ16763 222 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 FAM229BQ4G0N7 80 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 OR2T2Q6IF00 324 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 Q6ZS92 163 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 OR5AK2Q8NH90 309 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 MUC7Q8TAX7 377 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 FGF13Q92913 245 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 TMEM106BQ9NUM4 274 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 MED9Q9NWA0 146 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 BET1LQ9NYM9 111 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 POLEQ07864 2286 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 PTPRTO14522 1441 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 ADGRB1O14514 1584 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 CCDC88AQ3V6T2 1871 aa2.82□□□□□ -1.96
PRPF40A-206ENST00000471167 IGKV1D-37A0A075B6S9 117 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 IGHV3-15A0A0B4J1V0 119 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 FAM24AA6NFZ4 105 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 LYRM1O43325 122 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 EDF1O60869 148 aaKnown RBP2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 SHBGP04278 402 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 NFYAP23511 347 aaPredicted RBP2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 CD24P25063 80 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 PEBP1P30086 187 aaKnown RBP2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 CKS2P33552 79 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 NPC2P61916 151 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 FAM74A1Q5RGS3 127 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 C1orf64Q8NEQ6 169 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms