RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
HMGXB4-206ENST00000466438 RHOBP62745 196 aa10.49□□□□□ -0.73
HMGXB4-206ENST00000466438 FAM122CQ6P4D5 195 aa10.49□□□□□ -0.73
HMGXB4-206ENST00000466438 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
HMGXB4-206ENST00000466438 MRPL32Q9BYC8 188 aaKnown RBP10.49□□□□□ -0.73
HMGXB4-206ENST00000466438 VSIRQ9H7M9 311 aa10.49□□□□□ -0.73
HMGXB4-206ENST00000466438 MAP1LC3B2A6NCE7 125 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 YIF1AO95070 293 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 S100A7P31151 101 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 FHITP49789 147 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 ZNF90Q03938 601 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 SPSB3Q6PJ21 355 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 COMMD7Q86VX2 200 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 STHQ8IWL8 128 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 LYPD1Q8N2G4 141 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 LYPD6BQ8NI32 183 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 SFT2D1Q8WV19 159 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 FRZBQ92765 325 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 MAP1LC3BQ9GZQ8 125 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 SLC25A22Q9H936 323 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
HMGXB4-206ENST00000466438 IGKV3-7A0A075B6H7 116 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 IGHV3OR16-8A0A075B7F1 116 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 TRAV1-1A0A0B4J248 108 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 NBDYA0A0U1RRE5 68 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 OR2T8A6NH00 312 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 ZNF207O43670 478 aaKnown RBP10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 RD3LP0DJH9 198 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 TAS2R45P59539 299 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 PLP1P60201 277 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 RELQ04864 619 aaPredicted RBP10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 TIGITQ495A1 244 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 LEMD1Q68G75 181 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 OR51G1Q8NGK1 321 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 Q8WTZ3 238 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 MBD3L1Q8WWY6 194 aa10.47□□□□□ -0.73
HMGXB4-206ENST00000466438 CHEK1O14757 476 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 IFNA1P01562 189 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 IGKV1-17P01599 117 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 OR5G3P0C626 314 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 PSG1P11464 419 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 GATA2P23769 480 aaPredicted RBP10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 DEFB131AP59861 70 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 KRTAP10-2P60368 255 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 KHDC3LQ587J8 217 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 FAM78BQ5VT40 261 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 C10orf113Q5VZT2 155 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 GBGT1Q8N5D6 347 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 RAB24Q969Q5 203 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 PBDC1Q9BVG4 233 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 RHPN1-AS1Q9BWJ2 59 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 DNAJC4Q9NNZ3 241 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 RNF24Q9Y225 148 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 FUT9Q9Y231 359 aa10.46□□□□□ -0.73
HMGXB4-206ENST00000466438 RAB19A4D1S5 217 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 F8W735 103 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 HYPMO75409 117 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 PPT1P50897 306 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 LYZP61626 148 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 PAFAH1B2P68402 229 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 ZNF726P1Q15940 193 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 GCSAMLQ5JQS6 135 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 FAM90A2PQ658T7 463 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 LCN15Q6UWW0 184 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 ZNF600Q6ZNG1 722 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 TRPT1Q86TN4 253 aaKnown RBP10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 OR1B1Q8NGR6 318 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 HIGD1AQ9Y241 93 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 HMCN2Q8NDA2 5059 aa10.45□□□□□ -0.74
HMGXB4-206ENST00000466438 IGHV7-4-1A0A0J9YVY3 117 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 CXorf1O96002 111 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 IL4P05112 153 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 CTSGP08311 255 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 ORM2P19652 201 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 TAGLN2P37802 199 aaKnown RBP10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 UQCC3Q6UW78 93 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 CSNK1G2-AS1Q8NCQ2 148 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 RNF125Q96EQ8 232 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 DOK5Q9P104 306 aa10.44□□□□□ -0.74
HMGXB4-206ENST00000466438 A0A1B0GV50 99 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 STAG3L2P0CL84 134 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 STAG3L3P0CL85 134 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 PSMB3P49720 205 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 PQLC2Q6ZP29 291 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 IQCF2Q8IXL9 164 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 EIF4E3Q8N5X7 224 aaKnown RBP10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 STXBP6Q8NFX7 210 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 SEPSECSQ9HD40 501 aaKnown RBP10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 MANBALQ9NQG1 85 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
HMGXB4-206ENST00000466438 FGF8P55075 233 aaPredicted RBP10.42□□□□□ -0.74
HMGXB4-206ENST00000466438 SSX7Q7RTT5 188 aa10.42□□□□□ -0.74
HMGXB4-206ENST00000466438 LINC00305Q7Z4B0 112 aa10.42□□□□□ -0.74
HMGXB4-206ENST00000466438 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
HMGXB4-206ENST00000466438 TMEM37Q8WXS4 190 aa10.42□□□□□ -0.74
HMGXB4-206ENST00000466438 FAM210AQ96ND0 272 aa10.42□□□□□ -0.74
HMGXB4-206ENST00000466438 PUS1Q9Y606 427 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGXB4-206ENST00000466438 IGHV3-49A0A0A0MS15 119 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 OR7C2O60412 319 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 ATP6V1G1O75348 118 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms