RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ATP6V1FQ16864 119 aa15.5■□□□□ 0.07
LIME1-203ENST00000465591 CHAC2Q8WUX2 184 aa15.5■□□□□ 0.07
LIME1-203ENST00000465591 PXMP4Q9Y6I8 212 aa15.5■□□□□ 0.07
LIME1-203ENST00000465591 GIPP09681 153 aaPredicted RBP15.49■□□□□ 0.07
LIME1-203ENST00000465591 GCSAMLQ5JQS6 135 aa15.49■□□□□ 0.07
LIME1-203ENST00000465591 OR1L4Q8NGR5 311 aa15.49■□□□□ 0.07
LIME1-203ENST00000465591 THAP6Q8TBB0 222 aa15.49■□□□□ 0.07
LIME1-203ENST00000465591 NIPSNAP3BQ9BS92 247 aa15.49■□□□□ 0.07
LIME1-203ENST00000465591 AZU1P20160 251 aa15.48■□□□□ 0.07
LIME1-203ENST00000465591 KIR3DS1Q14943 382 aa15.48■□□□□ 0.07
LIME1-203ENST00000465591 OR5C1Q8NGR4 320 aa15.48■□□□□ 0.07
LIME1-203ENST00000465591 PFDN5Q99471 154 aa15.48■□□□□ 0.07
LIME1-203ENST00000465591 NPCDR1Q9BY65 106 aa15.48■□□□□ 0.07
LIME1-203ENST00000465591 PARD6GQ9BYG4 376 aaPredicted RBP15.48■□□□□ 0.07
LIME1-203ENST00000465591 ZNF586Q9NXT0 402 aa15.48■□□□□ 0.07
LIME1-203ENST00000465591 PLAC8L1A1L4L8 177 aa15.46■□□□□ 0.07
LIME1-203ENST00000465591 MBD2Q9UBB5 411 aa15.46■□□□□ 0.07
LIME1-203ENST00000465591 TEX48A0A1B0GUV7 120 aa15.45■□□□□ 0.06
LIME1-203ENST00000465591 CLINT1Q14677 625 aa15.45■□□□□ 0.06
LIME1-203ENST00000465591 NDUFAF3Q9BU61 184 aa15.45■□□□□ 0.06
LIME1-203ENST00000465591 PPP1R14DQ9NXH3 145 aa15.45■□□□□ 0.06
LIME1-203ENST00000465591 MPDU1O75352 247 aa15.44■□□□□ 0.06
LIME1-203ENST00000465591 HTN3P15516 51 aa15.44■□□□□ 0.06
LIME1-203ENST00000465591 CDKN1BP46527 198 aa15.44■□□□□ 0.06
LIME1-203ENST00000465591 NDUFB4O95168 129 aa15.43■□□□□ 0.06
LIME1-203ENST00000465591 PYYP10082 97 aa15.43■□□□□ 0.06
LIME1-203ENST00000465591 GUK1Q16774 197 aa15.43■□□□□ 0.06
LIME1-203ENST00000465591 Q6ZNX1 250 aa15.43■□□□□ 0.06
LIME1-203ENST00000465591 LINC01587Q99440 93 aa15.43■□□□□ 0.06
LIME1-203ENST00000465591 TMEM14CQ9P0S9 112 aa15.43■□□□□ 0.06
LIME1-203ENST00000465591 TRBV19A0A075B6N1 114 aa15.42■□□□□ 0.06
LIME1-203ENST00000465591 M0R3E3 92 aa15.42■□□□□ 0.06
LIME1-203ENST00000465591 RPL12P30050 165 aaKnown RBP15.42■□□□□ 0.06
LIME1-203ENST00000465591 TSPOP30536 169 aa15.42■□□□□ 0.06
LIME1-203ENST00000465591 DAD1P61803 113 aa15.42■□□□□ 0.06
LIME1-203ENST00000465591 OR2T35Q8NGX2 323 aa15.42■□□□□ 0.06
LIME1-203ENST00000465591 FAM167A-AS1Q96KT0 104 aa15.42■□□□□ 0.06
LIME1-203ENST00000465591 SLC25A2Q9BXI2 301 aa15.42■□□□□ 0.06
LIME1-203ENST00000465591 WDR61Q9GZS3 305 aaKnown RBP15.42■□□□□ 0.06
LIME1-203ENST00000465591 ZNF253O75346 499 aa15.41■□□□□ 0.06
LIME1-203ENST00000465591 CT45A10P0DMU9 189 aa15.41■□□□□ 0.06
LIME1-203ENST00000465591 MIR17HGQ75NE6 70 aa15.41■□□□□ 0.06
LIME1-203ENST00000465591 TMEM256Q8N2U0 113 aa15.41■□□□□ 0.06
LIME1-203ENST00000465591 OR10J6PQ8NGY7 276 aa15.41■□□□□ 0.06
LIME1-203ENST00000465591 NPIPB6E9PJ23 425 aa15.4■□□□□ 0.06
LIME1-203ENST00000465591 HIST1H1EP10412 219 aaKnown RBP15.4■□□□□ 0.06
LIME1-203ENST00000465591 HTN1P15515 57 aa15.4■□□□□ 0.06
LIME1-203ENST00000465591 TAS2R60P59551 318 aa15.4■□□□□ 0.06
LIME1-203ENST00000465591 GFI1BQ5VTD9 330 aa15.4■□□□□ 0.06
LIME1-203ENST00000465591 HSPB11Q9Y547 144 aa15.4■□□□□ 0.06
LIME1-203ENST00000465591 LYRM9A8MSI8 78 aa15.39■□□□□ 0.05
LIME1-203ENST00000465591 J3KRW8 73 aa15.38■□□□□ 0.05
LIME1-203ENST00000465591 DEFB130BP0DP73 79 aa15.38■□□□□ 0.05
LIME1-203ENST00000465591 DEFB130AP0DP74 79 aa15.38■□□□□ 0.05
LIME1-203ENST00000465591 TMEM88Q6PEY1 159 aa15.38■□□□□ 0.05
LIME1-203ENST00000465591 EXOC3-AS1Q8N2X6 119 aa15.38■□□□□ 0.05
LIME1-203ENST00000465591 BLNKQ8WV28 456 aa15.38■□□□□ 0.05
LIME1-203ENST00000465591 FAM210BQ96KR6 192 aa15.38■□□□□ 0.05
LIME1-203ENST00000465591 NACAE9PAV3 2078 aa15.38■□□□□ 0.05
LIME1-203ENST00000465591 P0DMU3 169 aa15.37■□□□□ 0.05
LIME1-203ENST00000465591 FAM231AP0DMU4 169 aa15.37■□□□□ 0.05
LIME1-203ENST00000465591 FAM231CP0DMU5 169 aa15.37■□□□□ 0.05
LIME1-203ENST00000465591 ERCC8Q13216 396 aa15.37■□□□□ 0.05
LIME1-203ENST00000465591 Q5BKY6 102 aa15.37■□□□□ 0.05
LIME1-203ENST00000465591 POM121L12Q8N7R1 296 aa15.37■□□□□ 0.05
LIME1-203ENST00000465591 INO80EQ8NBZ0 244 aaPredicted RBP15.37■□□□□ 0.05
LIME1-203ENST00000465591 RNASE8Q8TDE3 154 aaKnown RBP15.37■□□□□ 0.05
LIME1-203ENST00000465591 MRPL53Q96EL3 112 aaKnown RBP15.37■□□□□ 0.05
LIME1-203ENST00000465591 ATP5SQ99766 215 aa15.37■□□□□ 0.05
LIME1-203ENST00000465591 DNAH2Q9P225 4427 aa15.37■□□□□ 0.05
LIME1-203ENST00000465591 H7BYZ3 331 aa15.36■□□□□ 0.05
LIME1-203ENST00000465591 PDE6HQ13956 83 aa15.36■□□□□ 0.05
LIME1-203ENST00000465591 ODF3Q96PU9 254 aa15.36■□□□□ 0.05
LIME1-203ENST00000465591 SMIM3Q9BZL3 60 aa15.36■□□□□ 0.05
LIME1-203ENST00000465591 TIMM9Q9Y5J7 89 aa15.36■□□□□ 0.05
LIME1-203ENST00000465591 FXYD6-FXYD2A0A087WZ82 144 aa15.35■□□□□ 0.05
LIME1-203ENST00000465591 C16orf74Q96GX8 76 aa15.35■□□□□ 0.05
LIME1-203ENST00000465591 AQP10Q96PS8 301 aa15.35■□□□□ 0.05
LIME1-203ENST00000465591 C20orf144Q9BQM9 153 aa15.35■□□□□ 0.05
LIME1-203ENST00000465591 DNAH17Q9UFH2 4485 aa15.34■□□□□ 0.05
LIME1-203ENST00000465591 IFNA5P01569 189 aa15.34■□□□□ 0.05
LIME1-203ENST00000465591 TMEM263Q8WUH6 116 aaKnown RBP15.34■□□□□ 0.05
LIME1-203ENST00000465591 FXYD5Q96DB9 178 aa15.34■□□□□ 0.05
LIME1-203ENST00000465591 ZNF503Q96F45 646 aa15.34■□□□□ 0.05
LIME1-203ENST00000465591 WFDC1Q9HC57 220 aa15.34■□□□□ 0.05
LIME1-203ENST00000465591 NOP10Q9NPE3 64 aaKnown RBP15.34■□□□□ 0.05
LIME1-203ENST00000465591 TRAV12-3A0A0B4J271 114 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 OR10J4P0C629 311 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 NBEAP1P0C6P0 100 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 LEPP41159 167 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 ICAM4Q14773 271 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 SCGB1C1Q8TD33 95 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 FAM19A4Q96LR4 140 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 MRPL32Q9BYC8 188 aaKnown RBP15.33■□□□□ 0.04
LIME1-203ENST00000465591 AGPAT4-IT1Q9H0P7 198 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 OR51M1Q9H341 326 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 KCNIP2Q9NS61 270 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 FUT9Q9Y231 359 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 PRELID1Q9Y255 219 aa15.33■□□□□ 0.04
LIME1-203ENST00000465591 FAT2Q9NYQ8 4349 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms