RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SLC17A3O00476 420 aa16.71■□□□□ 0.27
CBX3-204ENST00000456948 SPART-AS1P0CW21 52 aa16.71■□□□□ 0.27
CBX3-204ENST00000456948 TAS2R45P59539 299 aa16.71■□□□□ 0.27
CBX3-204ENST00000456948 TMEM256Q8N2U0 113 aa16.71■□□□□ 0.27
CBX3-204ENST00000456948 BLNKQ8WV28 456 aa16.71■□□□□ 0.27
CBX3-204ENST00000456948 CDKN1BP46527 198 aa16.7■□□□□ 0.26
CBX3-204ENST00000456948 EMP1P54849 157 aa16.7■□□□□ 0.26
CBX3-204ENST00000456948 TCTAP57738 103 aa16.7■□□□□ 0.26
CBX3-204ENST00000456948 MIR17HGQ75NE6 70 aa16.7■□□□□ 0.26
CBX3-204ENST00000456948 C1orf158Q8N1D5 194 aa16.7■□□□□ 0.26
CBX3-204ENST00000456948 PAXXQ9BUH6 204 aa16.7■□□□□ 0.26
CBX3-204ENST00000456948 SLC25A2Q9BXI2 301 aa16.7■□□□□ 0.26
CBX3-204ENST00000456948 TRAV10A0A0B4J240 114 aa16.69■□□□□ 0.26
CBX3-204ENST00000456948 NBEAP1P0C6P0 100 aa16.69■□□□□ 0.26
CBX3-204ENST00000456948 PYYP10082 97 aa16.69■□□□□ 0.26
CBX3-204ENST00000456948 OXA1LQ15070 435 aa16.69■□□□□ 0.26
CBX3-204ENST00000456948 ACOT6Q3I5F7 207 aaPredicted RBP16.69■□□□□ 0.26
CBX3-204ENST00000456948 AQP10Q96PS8 301 aa16.69■□□□□ 0.26
CBX3-204ENST00000456948 RYR2Q92736 4967 aa16.68■□□□□ 0.26
CBX3-204ENST00000456948 LOC102723971A0A1B0GUV8 181 aa16.68■□□□□ 0.26
CBX3-204ENST00000456948 OR7C2O60412 319 aa16.68■□□□□ 0.26
CBX3-204ENST00000456948 A0A1W2PPV4 95 aa16.67■□□□□ 0.26
CBX3-204ENST00000456948 KHDC3LQ587J8 217 aa16.67■□□□□ 0.26
CBX3-204ENST00000456948 RNF141Q8WVD5 230 aa16.67■□□□□ 0.26
CBX3-204ENST00000456948 FAM167A-AS1Q96KT0 104 aa16.67■□□□□ 0.26
CBX3-204ENST00000456948 LINC01587Q99440 93 aa16.67■□□□□ 0.26
CBX3-204ENST00000456948 C20orf144Q9BQM9 153 aa16.67■□□□□ 0.26
CBX3-204ENST00000456948 SACSQ9NZJ4 4579 aa16.67■□□□□ 0.26
CBX3-204ENST00000456948 TRAV12-2A0A075B6T6 113 aa16.66■□□□□ 0.26
CBX3-204ENST00000456948 CRXO43186 299 aaPredicted RBP16.66■□□□□ 0.26
CBX3-204ENST00000456948 LEPP41159 167 aa16.66■□□□□ 0.26
CBX3-204ENST00000456948 BAP18Q8IXM2 172 aa16.66■□□□□ 0.26
CBX3-204ENST00000456948 ODF3Q96PU9 254 aa16.66■□□□□ 0.26
CBX3-204ENST00000456948 WFDC1Q9HC57 220 aa16.66■□□□□ 0.26
CBX3-204ENST00000456948 M6PRP20645 277 aa16.65■□□□□ 0.26
CBX3-204ENST00000456948 RPP25LQ8N5L8 163 aaKnown RBP16.65■□□□□ 0.26
CBX3-204ENST00000456948 OR2T35Q8NGX2 323 aa16.65■□□□□ 0.26
CBX3-204ENST00000456948 PRAC2D3DTV9 90 aa16.64■□□□□ 0.25
CBX3-204ENST00000456948 NDUFB4O95168 129 aa16.64■□□□□ 0.25
CBX3-204ENST00000456948 CSN1S1P47710 185 aa16.64■□□□□ 0.25
CBX3-204ENST00000456948 Q6ZTC4 211 aa16.64■□□□□ 0.25
CBX3-204ENST00000456948 LYPD1Q8N2G4 141 aa16.64■□□□□ 0.25
CBX3-204ENST00000456948 LINC00477Q96M19 166 aa16.64■□□□□ 0.25
CBX3-204ENST00000456948 FXYD6-FXYD2A0A087WZ82 144 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 IGLL5B9A064 214 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 NPIPB6E9PJ23 425 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 LY6G6CO95867 125 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 OR10J4P0C629 311 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 TAS2R60P59551 318 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 ICAM4Q14773 271 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 C12orf74Q32Q52 190 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 FXYD5Q96DB9 178 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 NIPSNAP3BQ9BS92 247 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 CELA1Q9UNI1 258 aa16.63■□□□□ 0.25
CBX3-204ENST00000456948 DEFB131BA0A096LNP1 70 aa16.62■□□□□ 0.25
CBX3-204ENST00000456948 BORCS7-ASMTA0A0B4J1R7 106 aa16.62■□□□□ 0.25
CBX3-204ENST00000456948 H7BYZ3 331 aa16.62■□□□□ 0.25
CBX3-204ENST00000456948 MBP02144 154 aa16.62■□□□□ 0.25
CBX3-204ENST00000456948 UBE2L3P68036 154 aaKnown RBP16.62■□□□□ 0.25
CBX3-204ENST00000456948 EXOC3-AS1Q8N2X6 119 aa16.62■□□□□ 0.25
CBX3-204ENST00000456948 LINC00476Q8WZB0 136 aa16.62■□□□□ 0.25
CBX3-204ENST00000456948 DKK2Q9UBU2 259 aa16.62■□□□□ 0.25
CBX3-204ENST00000456948 YTHDF2Q9Y5A9 579 aaKnown RBP16.62■□□□□ 0.25
CBX3-204ENST00000456948 ZNF705GA8MUZ8 300 aaPredicted RBP16.61■□□□□ 0.25
CBX3-204ENST00000456948 M0R3E3 92 aa16.61■□□□□ 0.25
CBX3-204ENST00000456948 SERF2P84101 59 aa16.61■□□□□ 0.25
CBX3-204ENST00000456948 FAM222AQ5U5X8 452 aa16.61■□□□□ 0.25
CBX3-204ENST00000456948 PQLC2Q6ZP29 291 aa16.61■□□□□ 0.25
CBX3-204ENST00000456948 CCDC28AQ8IWP9 274 aa16.61■□□□□ 0.25
CBX3-204ENST00000456948 OR10G4Q8NGN3 311 aa16.61■□□□□ 0.25
CBX3-204ENST00000456948 OR10G9Q8NGN4 311 aa16.61■□□□□ 0.25
CBX3-204ENST00000456948 OR10G7Q8NGN6 311 aa16.61■□□□□ 0.25
CBX3-204ENST00000456948 PSMG3Q9BT73 122 aaPredicted RBP16.61■□□□□ 0.25
CBX3-204ENST00000456948 PRB4P10163 310 aaPredicted RBP16.6■□□□□ 0.25
CBX3-204ENST00000456948 HTN1P15515 57 aa16.6■□□□□ 0.25
CBX3-204ENST00000456948 RANP62826 216 aaKnown RBP16.6■□□□□ 0.25
CBX3-204ENST00000456948 FAM74A1Q5RGS3 127 aa16.6■□□□□ 0.25
CBX3-204ENST00000456948 TMEM78Q5T7P6 136 aa16.6■□□□□ 0.25
CBX3-204ENST00000456948 FAM122CQ6P4D5 195 aa16.6■□□□□ 0.25
CBX3-204ENST00000456948 ZNF493Q6ZR52 646 aa16.6■□□□□ 0.25
CBX3-204ENST00000456948 HSD17B11Q8NBQ5 300 aa16.6■□□□□ 0.25
CBX3-204ENST00000456948 CT45A10P0DMU9 189 aa16.59■□□□□ 0.25
CBX3-204ENST00000456948 Q5BKY6 102 aa16.59■□□□□ 0.25
CBX3-204ENST00000456948 ZNF767PQ75MW2 155 aa16.59■□□□□ 0.25
CBX3-204ENST00000456948 OR2G3Q8NGZ4 309 aa16.59■□□□□ 0.25
CBX3-204ENST00000456948 RXFP4Q8TDU9 374 aa16.59■□□□□ 0.25
CBX3-204ENST00000456948 GNPNAT1Q96EK6 184 aaPredicted RBP16.59■□□□□ 0.25
CBX3-204ENST00000456948 C16orf74Q96GX8 76 aa16.59■□□□□ 0.25
CBX3-204ENST00000456948 TNFSF18Q9UNG2 199 aa16.59■□□□□ 0.25
CBX3-204ENST00000456948 LYRM9A8MSI8 78 aa16.58■□□□□ 0.24
CBX3-204ENST00000456948 SLC25A5P05141 298 aaKnown RBP16.58■□□□□ 0.24
CBX3-204ENST00000456948 DAD1P61803 113 aa16.58■□□□□ 0.24
CBX3-204ENST00000456948 C9orf47Q6ZRZ4 202 aa16.58■□□□□ 0.24
CBX3-204ENST00000456948 TAAR5O14804 337 aa16.57■□□□□ 0.24
CBX3-204ENST00000456948 LGALS9CQ6DKI2 356 aa16.57■□□□□ 0.24
CBX3-204ENST00000456948 J3KRW8 73 aa16.56■□□□□ 0.24
CBX3-204ENST00000456948 NMBP08949 121 aa16.56■□□□□ 0.24
CBX3-204ENST00000456948 ATP6V0CP27449 155 aa16.56■□□□□ 0.24
CBX3-204ENST00000456948 RAB2AP61019 212 aa16.56■□□□□ 0.24
CBX3-204ENST00000456948 GFI1BQ5VTD9 330 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms