RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 RHOBP62745 196 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 HIST1H1AQ02539 215 aaPredicted RBP3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 ARL16Q0P5N6 197 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 OXA1LQ15070 435 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 C1orf134Q5TEV5 83 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 MORN5Q5VZ52 161 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 SPATA31B1PQ5VZV4 182 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 CYP2G1PQ6ZSU1 146 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 ACOT7LQ6ZUV0 252 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 TMEM144Q7Z5S9 345 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 CCDC190Q86UF4 302 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 NRACQ8N912 160 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 ZNF738Q8NE65 137 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 BPIFCQ8NFQ6 507 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 OR4D5Q8NGN0 318 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 IGF2BP2-AS1Q96M15 143 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 CIB3Q96Q77 187 aaPredicted RBP3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 BCL7BQ9BQE9 202 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 SLC25A21Q9BQT8 299 aaPredicted RBP3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 SHANK2-AS3Q9BTD1 123 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 PARD6GQ9BYG4 376 aaPredicted RBP3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 ARL6Q9H0F7 186 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 GSKIPQ9P0R6 139 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 HIGD1AQ9Y241 93 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 KIAA1109Q2LD37 5005 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 A8MTW9 85 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 PRAC2D3DTV9 90 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 USP17L23D6RBM5 183 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 HYPMO75409 117 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 CFDP00746 253 aaPredicted RBP3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 OR4E1P0C645 316 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 LINC00869P0C866 280 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 CXCL3P19876 107 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 MEOX2P50222 304 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 SLC38A11Q08AI6 406 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 OR5I1Q13606 314 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 PSG3Q16557 428 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 RNF212Q495C1 297 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 OR8A1Q8NGG7 326 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 LRRC20Q8TCA0 184 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 RPL36ALQ969Q0 106 aaKnown RBP3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 SMIM8Q96KF7 97 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 FAM210BQ96KR6 192 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 SDHCQ99643 169 aaPredicted RBP3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 ATG101Q9BSB4 218 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 SRRQ9GZT4 340 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 NPVFQ9HCQ7 196 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 NOP10Q9NPE3 64 aaKnown RBP3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
GTF3C3-208ENST00000455546 TRAV5A0A0B4J249 113 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 PIGBOS1A0A0B4J2F0 54 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 IGLV5-39A0A0G2JS06 123 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 A0A0J9YY99 117 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 TEX48A0A1B0GUV7 120 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 LYRM9A8MSI8 78 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 BOLA2-SMG1P6H3BVE0 249 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 CCSO14618 274 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 GOSR2O14653 212 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 AGPAT2O15120 278 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 MRPS12O15235 138 aaKnown RBP3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 NDUFB6O95139 128 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 INSP01308 110 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 RPL7P18124 248 aaKnown RBP3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 BTCP35070 178 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 INPP1P49441 399 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 TAS2R60P59551 318 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 PLP1P60201 277 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 DLK1P80370 383 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 PXDC1Q5TGL8 231 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 SAMD13Q5VXD3 122 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 TMEM14EPQ6UXP3 125 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 LINC00305Q7Z4B0 112 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 OR10P1Q8NGE3 313 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 TMEM37Q8WXS4 190 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 RPUSD4Q96CM3 377 aaKnown RBP3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 GPR82Q96P67 336 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 ARV1Q9H2C2 271 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 LINC00588Q9Y4M8 146 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 FAT2Q9NYQ8 4349 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 HERC2O95714 4834 aa3.27□□□□□ -1.89
GTF3C3-208ENST00000455546 TRAV6A0A075B6T7 132 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 A0A087X0K7 114 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 TRAV12-3A0A0B4J271 114 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 NBDYA0A0U1RRE5 68 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 C7orf66A4D0T2 115 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 FAM24AA6NFZ4 105 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 FAM25EA8MYX2 175 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 H3BQ15 152 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 SLC17A3O00476 420 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 ATP5G1P05496 136 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 S100A7P31151 101 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 CDKN1BP46527 198 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 ATP5G3P48201 142 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 CCL18P55774 89 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 B2MP61769 119 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 SELENOTP62341 195 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 OPCMLQ14982 345 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 IAH1Q2TAA2 248 aaPredicted RBP3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 SOHLH1Q5JUK2 328 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms