RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FAM213BQ8TBF2 198 aa10.56□□□□□ -0.72
HMGXB4-204ENST00000455359 RXFP4Q8TDU9 374 aa10.56□□□□□ -0.72
HMGXB4-204ENST00000455359 TRAV1-1A0A0B4J248 108 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 A0A1W2PRE2 83 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 A8MTW9 85 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 TEX46H3BTG2 121 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 H2AFB1P0C5Y9 115 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 NHLRC4P0CG21 123 aaPredicted RBP10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 CSN1S1P47710 185 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 FHITP49789 147 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 RANP62826 216 aaKnown RBP10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 ZNF124Q15973 351 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 IGFL4Q6B9Z1 124 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 SSX7Q7RTT5 188 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 OR8A1Q8NGG7 326 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 SFT2D1Q8WV19 159 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 NKX6-2Q9C056 277 aaPredicted RBP10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 Q9H3A6 140 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 BOLA1Q9Y3E2 137 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 ARL2-SNX15V9GYD0 113 aa10.55□□□□□ -0.72
HMGXB4-204ENST00000455359 BOLA2-SMG1P6H3BVE0 249 aa10.54□□□□□ -0.72
HMGXB4-204ENST00000455359 EIF3GO75821 320 aaKnown RBP eCLIP10.54□□□□□ -0.72
HMGXB4-204ENST00000455359 HBE1P02100 147 aa10.54□□□□□ -0.72
HMGXB4-204ENST00000455359 PPT1P50897 306 aa10.54□□□□□ -0.72
HMGXB4-204ENST00000455359 ICAM4Q14773 271 aa10.54□□□□□ -0.72
HMGXB4-204ENST00000455359 OR10J6PQ8NGY7 276 aa10.54□□□□□ -0.72
HMGXB4-204ENST00000455359 CSTL1Q9H114 145 aa10.54□□□□□ -0.72
HMGXB4-204ENST00000455359 HLA-DMBP28068 263 aa10.53□□□□□ -0.72
HMGXB4-204ENST00000455359 HAGHQ16775 308 aa10.53□□□□□ -0.72
HMGXB4-204ENST00000455359 Q6ZWC4 215 aa10.53□□□□□ -0.72
HMGXB4-204ENST00000455359 EXOC3-AS1Q8N2X6 119 aa10.53□□□□□ -0.72
HMGXB4-204ENST00000455359 RBAKDNA6NC62 111 aa10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 PGPA6NDG6 321 aa10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 ZNF705FA8MVS1 300 aaPredicted RBP10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 CNN1P51911 297 aaKnown RBP10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 FGF8P55075 233 aaPredicted RBP10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 GDF5OSQ5U4N7 250 aa10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 IQCF2Q8IXL9 164 aa10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 CMTM2Q8TAZ6 248 aa10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 TCEAL7Q9BRU2 100 aa10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.73
HMGXB4-204ENST00000455359 SERTM2A0A1B0GWG4 89 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 F6UB75 175 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 M0R3E3 92 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 AMBPP02760 352 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 SLC25A5P05141 298 aaKnown RBP10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 BLOC1S1P78537 153 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 HIST1H1AQ02539 215 aaPredicted RBP10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 PMS2P11Q13670 270 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 ALKAL2Q6UX46 152 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 SBSPONQ8IVN8 264 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 C5orf17Q8NAS9 161 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 OR4B1Q8NGF8 309 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 ODF3Q96PU9 254 aa10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 PRKDCP78527 4128 aaKnown RBP10.51□□□□□ -0.73
HMGXB4-204ENST00000455359 ZNF705EA8MWA4 302 aaPredicted RBP10.5□□□□□ -0.73
HMGXB4-204ENST00000455359 NPIPB6E9PJ23 425 aa10.5□□□□□ -0.73
HMGXB4-204ENST00000455359 DEFB1P60022 68 aa10.5□□□□□ -0.73
HMGXB4-204ENST00000455359 LINC00477Q96M19 166 aa10.5□□□□□ -0.73
HMGXB4-204ENST00000455359 SPATA25Q9BR10 227 aa10.5□□□□□ -0.73
HMGXB4-204ENST00000455359 TM2D3Q9BRN9 247 aa10.5□□□□□ -0.73
HMGXB4-204ENST00000455359 TMPRSS5Q9H3S3 457 aa10.5□□□□□ -0.73
HMGXB4-204ENST00000455359 TP53TG1Q9Y2A0 90 aa10.5□□□□□ -0.73
HMGXB4-204ENST00000455359 TRBV7-9A0A0J9YWB2 115 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 FBLL1A6NHQ2 334 aaKnown RBP10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 FAM74A7A6NL05 159 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 DIRC3C9JPN6 131 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 CA1P00915 261 aaPredicted RBP10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 TSPOP30536 169 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 TEX261Q6UWH6 196 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 AMTNQ6UX39 209 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 C9orf47Q6ZRZ4 202 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 PPP1R14DQ9NXH3 145 aa10.49□□□□□ -0.73
HMGXB4-204ENST00000455359 GGTLC3B5MD39 225 aa10.48□□□□□ -0.73
HMGXB4-204ENST00000455359 K7EQM0 130 aa10.48□□□□□ -0.73
HMGXB4-204ENST00000455359 IFNA7P01567 189 aa10.48□□□□□ -0.73
HMGXB4-204ENST00000455359 SUMO1P63165 101 aaKnown RBP10.48□□□□□ -0.73
HMGXB4-204ENST00000455359 TXNDC17Q9BRA2 123 aa10.48□□□□□ -0.73
HMGXB4-204ENST00000455359 MANBALQ9NQG1 85 aa10.48□□□□□ -0.73
HMGXB4-204ENST00000455359 NMBP08949 121 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 GIG44P09565 113 aaPredicted RBP10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 ZNF705DP0CH99 300 aaPredicted RBP10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 ZNF705BP0CI00 300 aaPredicted RBP10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 TAGLN2P37802 199 aaKnown RBP10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 TMEM78Q5T7P6 136 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 HIST1H2BAQ96A08 127 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 RNF183Q96D59 192 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 RCHY1Q96PM5 261 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 ASCL2Q99929 193 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 EPDR1Q9UM22 224 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 YTHDF2Q9Y5A9 579 aaKnown RBP10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 LENEPQ9Y5L5 61 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 NBEAL2Q6ZNJ1 2754 aa10.47□□□□□ -0.73
HMGXB4-204ENST00000455359 F6UZH7 168 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 IFNA1P01562 189 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 IGKV3-20P01619 116 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms